EY735157

Overview
NameEY735157
Unique NameEY735157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735157_ssr434 microsatellite EY735157_ssr434:434..445. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY735157 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.193e-21
Identity = 38/47 (80.85%), Postives = 44/47 (93.62%), Query Frame = 3 
Query:  459 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHL 599
            K+DAIHAFAREG+++NLLKCIENG+ VN RDSEGR PLHWA+DRGHL
Sbjct:  218 KIDAIHAFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHL 264

HSP 2 Score: 34.6538 bits (78), Expect = 1.193e-21
Identity = 24/55 (43.64%), Postives = 31/55 (56.36%), Query Frame = 1 
Query:  601 NISELLVSKNADVNAQGN*RTNSICIMLVECE*GKAFA*FLWKQNCKNKALKENG 765
            N++E LV KNADVNA+ N    S+   +V CE  +A A FL KQ        E+G
Sbjct:  265 NVAEALVDKNADVNAKDNEGQTSLHYAVV-CE-REALAEFLVKQKADTTIKDEDG 317
[Close]
BLAST of EY735157 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.009e-20
Identity = 35/47 (74.47%), Postives = 42/47 (89.36%), Query Frame = 3 
Query:  459 KMDAIHAFAREGDMDNLLKCIENGVSVNLRDSEGRAPLHWAVDRGHL 599
            K+DAIH FAREG+++NLLK IE+G+ VN RDSEGR PLHWA+DRGHL
Sbjct:  233 KIDAIHGFAREGEVENLLKSIESGIPVNARDSEGRTPLHWAIDRGHL 279

HSP 2 Score: 35.8094 bits (81), Expect = 8.009e-20
Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 
Query:  601 NISELLVSKNADVNAQGN*RTNSICIMLVECE*GKAFA*FLWKQNCKNKALKENG 765
            NI+++LV KNADVNA+ N     +   +V C+  +A A FL KQN    A  E+G
Sbjct:  280 NIAKVLVDKNADVNAKDNEGQTPLHYAVV-CD-REAIAEFLVKQNANTAAKDEDG 332
The following BLAST results are available for this feature:
BLAST of EY735157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ACBP1_ARATH1.193e-2180.85Acyl-CoA-binding domain-containing protein 1 OS=Ar... [more]
ACBP2_ARATH8.009e-2074.47Acyl-CoA-binding domain-containing protein 2 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-B04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735157 ID=EY735157; Name=EY735157; organism=Citrus sinensis; type=EST; length=825bp
CCACGCGTCCGGTCATTTTCTGTTAGAATGCAAGGTTACTTGTATGAAAT
AGTTGTTACTTGGTCAATCTTTGCAATCTACCTTTTTCTTTCCACCTGTT
TGATGTATAAGTGAACCTGTGGTTTTAGATGCCAGGCCACTTTATTTGGC
ATAGAGAATGTCTTTTTCTTCTATGCGCTGTGGTCTAAGTGAATCCATGG
GGTGAGGAGGGCAGAGATTAGCCAGTCTATGTATGTCTTTATAGACTGAG
AAACAGAGAGTTCTGGTTATAAGGGAAAATGAAGAATCCTTGGAAATGCT
AATTCCATACTTATTAAATAAGTTTAACAGTACTGTGAATTGCGTTAATA
TTATGGATTCCAGTTGTTTAATAACTCATTAATGTTGTTTAAATTTCTTT
TCTCTTGACTGGAAACACTAAAATTAATGTCAATGCTGCTGCTGCTTTCT
TTTCCAGGAAAATGGATGCTATCCATGCCTTTGCTAGAGAAGGAGACATG
GATAATCTGCTTAAATGTATTGAAAATGGTGTTTCTGTTAATTTGAGAGA
TAGTGAGGGTCGTGCTCCATTGCATTGGGCTGTAGATCGCGGACACCTGA
AACATCTCTGAACTACTTGTTAGCAAGAATGCTGATGTAAACGCCCAAGG
AAATTGAAGGACAAACTCCATTTGCATTATGCTTGTTGAATGTGAATAGG
GGAAAGCATTTGCTTAGTTTCTTTGGAAACAAAATTGCAAAAATAAGGCT
TTAAAGGAAAATGGATGGGCAATTTCTCCTGTGTCTGTCTTGCCAATCCG
GACTGGGCCATGGTAAGCCAAACTG
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