EY735154

Overview
NameEY735154
Unique NameEY735154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735154_ssr571 microsatellite EY735154_ssr571:571..582. BLAST: Citrus ESTs to SwissProt
Homology
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y3698_BORPD (UPF0234 protein Bpet3698 OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=Bpet3698 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.132e-35
Identity = 74/96 (77.08%), Postives = 80/96 (83.33%), Query Frame = 2
Query:    2 GRLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            GRLSARGIDVRCL+VADPLENLGGARQKVT++QGIEQPV              VESQINGDKLRISGKKRDDLQ  IALL+KTDVDLPLQ++NFRD
Sbjct:   65 GRLSARGIDVRCLEVADPLENLGGARQKVTVRQGIEQPVAKKLIAAIKGAKLKVESQINGDKLRISGKKRDDLQEVIALLRKTDVDLPLQYQNFRD 160          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y2916_BORPE (UPF0234 protein BP2916 OS=Bordetella pertussis GN=BP2916 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 2
Query:    2 GRLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            GRLSAR IDVRC+DVADPLENLGGARQKVTIKQGIEQ +              VESQING+KLRI+GKKRDDLQ  IALL+KTDVDLPLQFENFRD
Sbjct:   65 GRLSARSIDVRCMDVADPLENLGGARQKVTIKQGIEQAIAKKLIAAIKASKVKVESQINGEKLRITGKKRDDLQAVIALLRKTDVDLPLQFENFRD 160          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y1300_BORBR (UPF0234 protein BB1300 OS=Bordetella bronchiseptica GN=BB1300 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 2
Query:    2 GRLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            GRLSAR IDVRC+DVADPLENLGGARQKVTIKQGIEQ +              VESQING+KLRI+GKKRDDLQ  IALL+KTDVDLPLQFENFRD
Sbjct:   65 GRLSARSIDVRCMDVADPLENLGGARQKVTIKQGIEQAIAKKLIAAIKASKVKVESQINGEKLRITGKKRDDLQAVIALLRKTDVDLPLQFENFRD 160          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y1084_BORPA (UPF0234 protein BPP1084 OS=Bordetella parapertussis GN=BPP1084 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.780e-34
Identity = 73/96 (76.04%), Postives = 78/96 (81.25%), Query Frame = 2
Query:    2 GRLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            GRLSAR IDVRC+DVADPLENLGGARQKVTIKQGIEQ +              VESQING+KLRI+GKKRDDLQ  IALL+KTDVDLPLQFENFRD
Sbjct:   65 GRLSARSIDVRCMDVADPLENLGGARQKVTIKQGIEQAIAKKLIAAIKASKVKVESQINGEKLRITGKKRDDLQAVIALLRKTDVDLPLQFENFRD 160          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y791_BORA1 (UPF0234 protein BAV0791 OS=Bordetella avium (strain 197N) GN=BAV0791 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.197e-30
Identity = 67/96 (69.79%), Postives = 74/96 (77.08%), Query Frame = 2
Query:    2 GRLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            GRL ARGIDVRCLD   PLENLGGARQK+TIKQGIEQ V              VESQING+KLRI+GKKRDDLQ  + LL+KT+VDLPLQF+NFRD
Sbjct:   65 GRLGARGIDVRCLDEESPLENLGGARQKITIKQGIEQAVSKKLIAAIKASKLKVESQINGEKLRITGKKRDDLQAVMQLLRKTEVDLPLQFDNFRD 160          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y711_XANOR (UPF0234 protein XOO0711 OS=Xanthomonas oryzae pv. oryzae GN=XOO0711 PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.027e-27
Identity = 63/95 (66.32%), Postives = 69/95 (72.63%), Query Frame = 2
Query:    5 RLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            RL ARGIDVRCL+  D   NL GARQKVT+KQGIEQ                VE+QINGDKLRI+GKKRDDLQ AIALLKK D +LPLQF+NFRD
Sbjct:   67 RLLARGIDVRCLEFGDMETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRITGKKRDDLQDAIALLKKADFELPLQFDNFRD 161          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y647_XANOM (UPF0234 protein XOO0647 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=XOO0647 PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.027e-27
Identity = 63/95 (66.32%), Postives = 69/95 (72.63%), Query Frame = 2
Query:    5 RLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            RL ARGIDVRCL+  D   NL GARQKVT+KQGIEQ                VE+QINGDKLRI+GKKRDDLQ AIALLKK D +LPLQF+NFRD
Sbjct:   67 RLLARGIDVRCLEFGDMETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRITGKKRDDLQDAIALLKKADFELPLQFDNFRD 161          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y3671_XANAC (UPF0234 protein XAC3671 OS=Xanthomonas axonopodis pv. citri GN=XAC3671 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.369e-26
Identity = 61/95 (64.21%), Postives = 69/95 (72.63%), Query Frame = 2
Query:    5 RLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            RL ARGID+RCL+  D   NL GARQKVT+KQGIEQ                VE+QINGDKLR++GKKRDDLQ AIALLKK D +LPLQF+NFRD
Sbjct:   67 RLLARGIDIRCLEFGDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIALLKKADFELPLQFDNFRD 161          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y3818_XANCB (UPF0234 protein xcc-b100_3818 OS=Xanthomonas campestris pv. campestris (strain B100) GN=xcc-b100_3818 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 61/95 (64.21%), Postives = 69/95 (72.63%), Query Frame = 2
Query:    5 RLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            RL ARGIDVRCL+  D   NL GARQKVT+KQGIEQ                VE+QINGDKLR++GKKRDDLQ AIA+LKK D +LPLQF+NFRD
Sbjct:   67 RLLARGIDVRCLEFGDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIAVLKKADFELPLQFDNFRD 161          
BLAST of EY735154 vs. ExPASy Swiss-Prot
Match: Y3703_XANC8 (UPF0234 protein XC_3703 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=XC_3703 PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.336e-26
Identity = 61/95 (64.21%), Postives = 69/95 (72.63%), Query Frame = 2
Query:    5 RLSARGIDVRCLDVADPLENLGGARQKVTIKQGIEQPVXXXXXXXXXXXXXXVESQINGDKLRISGKKRDDLQTAIALLKKTDVDLPLQFENFRD 289
            RL ARGIDVRCL+  D   NL GARQKVT+KQGIEQ                VE+QINGDKLR++GKKRDDLQ AIA+LKK D +LPLQF+NFRD
Sbjct:   67 RLLARGIDVRCLEFGDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIAVLKKADFELPLQFDNFRD 161          
The following BLAST results are available for this feature:
BLAST of EY735154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
Y3698_BORPD6.132e-3577.08UPF0234 protein Bpet3698 OS=Bordetella petrii (str... [more]
Y2916_BORPE6.780e-3476.04UPF0234 protein BP2916 OS=Bordetella pertussis GN=... [more]
Y1300_BORBR6.780e-3476.04UPF0234 protein BB1300 OS=Bordetella bronchiseptic... [more]
Y1084_BORPA6.780e-3476.04UPF0234 protein BPP1084 OS=Bordetella parapertussi... [more]
Y791_BORA11.197e-3069.79UPF0234 protein BAV0791 OS=Bordetella avium (strai... [more]
Y711_XANOR8.027e-2766.32UPF0234 protein XOO0711 OS=Xanthomonas oryzae pv. ... [more]
Y647_XANOM8.027e-2766.32UPF0234 protein XOO0647 OS=Xanthomonas oryzae pv. ... [more]
Y3671_XANAC1.369e-2664.21UPF0234 protein XAC3671 OS=Xanthomonas axonopodis ... [more]
Y3818_XANCB2.336e-2664.21UPF0234 protein xcc-b100_3818 OS=Xanthomonas campe... [more]
Y3703_XANC82.336e-2664.21UPF0234 protein XC_3703 OS=Xanthomonas campestris ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-102-B01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735154 ID=EY735154; Name=EY735154; organism=Citrus sinensis; type=EST; length=597bp
CGGCCGGCTGTCGGCGCGCGGGATCGACGTGCGCTGCCTGGATGTGGCGG
ATCCGCTGGAGAACCTGGGCGGGGCGCGGCAGAAGGTGACGATCAAGCAG
GGCATCGAGCAGCCGGTGGCCAAGAAGCTGATCGCGGCGATCAAGAACGC
CAAGCTCAAGGTCGAGAGCCAGATCAATGGCGACAAGCTGCGGATCAGCG
GGAAGAAGCGGGATGATCTGCAGACGGCGATTGCGTTGTTGAAGAAGACG
GATGTGGATTTGCCGTTGCAGTTTGAGAATTTTCGGGACTGAGTTTTTTT
TGGCGGCGGGGGCTTCCTAGGCCGACCCGTTGATTATCGCCATCTAATAC
ACATCACTGATAACTACCTAACAGAAACAGCGAACTCATCCTCAAACCAA
CCATCTACCATGCACATATACTCTAACCCACCCTAAAAAACCTTAAACCA
AAGATATTTTAAGTATGCCCACCTTCCTAACTAGATTGAAAATCTTCTCA
GTCGCACATCGCTACCAAGCATAACCTATAGCACAACCCCAGGTCTACGC
CGACTATAAAACTCTTTACTCCACCACCACCACAGCACTCGCCACAC
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