EY735094
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735094 vs. ExPASy Swiss-Prot
Match: VTI12_ARATH (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 1.008e-38 Identity = 86/143 (60.14%), Postives = 111/143 (77.62%), Query Frame = 1 Query: 100 DGDXTRKKIFRDQSGLDDADALIRKMDLEARSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXX----GKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLQTEELGISIVEDLNQQRETLLNSRNKV 516 +G+ + KI +SG+D+AD LIRKMDLEARSLQP+ KA+ L+KLREYKSDLN+LK+EFKRV G AD + VS +QR RLAMSVER++QS +RIRESRR+ML+TEE+GISIV+DL+QQR+TLL++ NK+ Sbjct: 31 NGEEKKGKIAEIKSGIDEADVLIRKMDLEARSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQRGRLAMSVERLDQSSDRIRESRRLMLETEEVGISIVQDLSQQRQTLLHAHNKL 173
BLAST of EY735094 vs. ExPASy Swiss-Prot
Match: VTI11_ARATH (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 4.243e-29 Identity = 65/139 (46.76%), Postives = 96/139 (69.06%), Query Frame = 1 Query: 100 DGDXTRKKIFRDQSGLDDADALIRKMDLEARSLQPNVKAMLLAKLREYKSDLNKLKREFKRV----XXXXXXXXXXXXGKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLQTEELGISIVEDLNQQRETLLNS 504 DG+ ++K+ +SGL++A+ LIRKMDLEAR+L PN+K+ LL KLRE+KSDLN K E KR+ G AD S +QR RL MS ER+ ++ +R+++SRR M++TEE+G+SI++DL+ QR++LL + Sbjct: 30 DGEQKKQKLSEIKSGLENAEVLIRKMDLEARTLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQRARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRA 168
BLAST of EY735094 vs. ExPASy Swiss-Prot
Match: VTI13_ARATH (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 4.691e-28 Identity = 64/139 (46.04%), Postives = 95/139 (68.35%), Query Frame = 1 Query: 100 DGDXTRKKIFRDQSGLDDADALIRKMDLEARSLQPNVKAMLLAKLREYKSDLNKLKREFKRV----XXXXXXXXXXXXGKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLQTEELGISIVEDLNQQRETLLNS 504 DG+ ++ + +SG+++A+AL++KMDLEAR+L PNVK+ LL KLREYKSDLN K E KR+ G AD S +QR RL MS + + ++ +RI++SRR +L+TEELG+SI++DL+ QR++LL + Sbjct: 30 DGEQKKQNLSEIKSGVEEAEALVKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQRSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRA 168
BLAST of EY735094 vs. ExPASy Swiss-Prot
Match: VTI1A_HUMAN (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Homo sapiens GN=VTI1A PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.990e-11 Identity = 39/141 (27.66%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 94 PPDGDXTRKKIFRDQSGLDDADALIRKMDLEARSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXXGKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLQTEELGISIVEDLNQQRETLLNSRNKV 516 PPD ++ + + L++A L+ +MDLE R + P + M ++R YK ++ KL+ +FKR D N S QR L + ER+ +S R+ ++ ++TE++G ++E+L+ RE + +R ++ Sbjct: 30 PPD--EKKQMVANVEKQLEEAKELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNELLGDDGN-SSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERL 167
BLAST of EY735094 vs. ExPASy Swiss-Prot
Match: VTI1A_MOUSE (Vesicle transport through interaction with t-SNAREs homolog 1A OS=Mus musculus GN=Vti1a PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 6.805e-11 Identity = 38/141 (26.95%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 94 PPDGDXTRKKIFRDQSGLDDADALIRKMDLEARSLQPNVKAMLLAKLREYKSDLNKLKREFKRVXXXXXXXXXXXXGKADPNVVSGEQRERLAMSVERINQSGERIRESRRVMLQTEELGISIVEDLNQQRETLLNSRNKV 516 PPD ++ + + L++A L+ +MDLE R + P + M ++R YK ++ KL+ +FKR D S QR L + ER+ +S R+ ++ ++TE++G ++E+L+ RE + +R+++ Sbjct: 30 PPD--EKKQMVANVEKQLEEARELLEQMDLEVREIPPQSRGMYSNRMRSYKQEMGKLETDFKRSRIAYSDEVRNEL-LGDAGNSSENQRAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRL 167 The following BLAST results are available for this feature:
BLAST of EY735094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY735094 ID=EY735094; Name=EY735094; organism=Citrus sinensis; type=EST; length=1015bpback to top |