EY735093

Overview
NameEY735093
Unique NameEY735093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length914
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_ARATH (Probable phenylalanyl-tRNA synthetase alpha chain OS=Arabidopsis thaliana GN=At4g39280 PE=2 SV=3)

HSP 1 Score: 241.506 bits (615), Expect = 2.991e-76
Identity = 120/148 (81.08%), Postives = 128/148 (86.49%), Query Frame = 2
Query:   38 KDELQKKLDPAVFKIGCSQAGKNKWVEMGKQVSRKVQNVEDKVKDLLLQVQNGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            KDELQKKL PAVFKIGCSQAGKNKWVEMGKQVSRKV++VEDKVK  LLQ+Q G    KE I SLKARKLIVPQ WKGYSV+KGPNYAP+RKKVATDLTRENLQ  +WKELEFKEYNF AKG P + GHL  LLKVRKQ KDIF+QMGF
Sbjct:   87 KDELQKKLAPAVFKIGCSQAGKNKWVEMGKQVSRKVKDVEDKVKGQLLQIQQGKEFDKESINSLKARKLIVPQIWKGYSVKKGPNYAPERKKVATDLTRENLQ--NWKELEFKEYNFKAKGAPVDAGHLHALLKVRKQFKDIFVQMGF 232          

HSP 2 Score: 66.2402 bits (160), Expect = 2.991e-76
Identity = 29/40 (72.50%), Postives = 33/40 (82.50%), Query Frame = 3
Query:  465 FSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            F +  FEEM TNN+VE +FWNFDALFQPQ+HPARDS D F
Sbjct:  227 FVQMGFEEMPTNNYVESSFWNFDALFQPQQHPARDSHDTF 266          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_DANRE (Phenylalanyl-tRNA synthetase alpha chain OS=Danio rerio GN=farsa PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 5.122e-38
Identity = 63/143 (44.06%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ +      G +V R V+++ED V+D L  VQNG +  L ++E   LK RKL+   T K Y + KG +++    K  T+LT E +  G+WKE +FK YNF A G   + GHL PL+KVR Q + IFL+MGF
Sbjct:  101 KVGFSKAMSNKWIRLDKAHEGGPRVFRTVESIEDTVRDKLQLVQNGQSAKLEEKEKNELKKRKLLAEVTVKSYWITKGNSFSTTITKQETELTPEMIASGNWKEKKFKPYNFEAMGVAPDCGHLHPLMKVRTQFRQIFLEMGF 243          

HSP 2 Score: 62.7734 bits (151), Expect = 5.122e-38
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM TNNF+E +FWNFD+LFQPQ+HPARD  D F
Sbjct:  235 RQIFLEMGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTF 277          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_CHICK (Phenylalanyl-tRNA synthetase alpha chain OS=Gallus gallus GN=FARSA PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.925e-37
Identity = 65/143 (45.45%), Postives = 88/143 (61.54%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQ--NGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            ++G S+A  NKW+ +      G ++ R V  V+D V+  L QVQ  NG +LS+ E   LK RKL++  T K Y +RKG  ++    +  TDLT E +  G W++L FK YNF+A G P   GHL PLLKVR QL+ IFL+MGF
Sbjct:  104 QVGFSKAMANKWLRLDKGAPGGPRIFRAVDAVQDVVQSSLRQVQEGNGGSLSERERTDLKRRKLLLEVTLKSYWIRKGSAFSTAVVRQETDLTPEMIATGSWRKLPFKAYNFSALGLPPTCGHLHPLLKVRSQLRQIFLEMGF 246          

HSP 2 Score: 62.3882 bits (150), Expect = 1.925e-37
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM T+NFVE +FWNFDALFQPQ+HPARD  D F
Sbjct:  238 RQIFLEMGFTEMPTDNFVESSFWNFDALFQPQQHPARDQHDTF 280          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFAB_XENLA (Phenylalanyl-tRNA synthetase alpha chain B OS=Xenopus laevis GN=farsa-B PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 7.209e-37
Identity = 63/143 (44.06%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEMGKQ------VSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ + K       V R V+ +ED VK+ L  +  G A  +++++   LK RKL+   T K Y V KG  ++    K  TDLT E +  G W+E +FK YNFNA G   E GHL PLLKVR Q + IFL+MGF
Sbjct:  102 KVGFSKAMSNKWIRLDKAAAGGPCVYRVVETIEDTVKEKLQLILKGRADDVNEKDKNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFNALGVMPECGHLHPLLKVRTQFRQIFLEMGF 244          

HSP 2 Score: 63.929 bits (154), Expect = 7.209e-37
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM TNNF+E +FWNFDALFQPQ+HPARD  D F
Sbjct:  236 RQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTF 278          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFAA_XENLA (Phenylalanyl-tRNA synthetase alpha chain A OS=Xenopus laevis GN=farsa-A PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.076e-36
Identity = 61/143 (42.66%), Postives = 85/143 (59.44%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ +      G ++ R V ++ED VK+ L  +  G A  +++++   LK RKL+   T K Y V KG  ++    K  TDLT E +  G W+E +FK YNF+A G   E GHL PLLKVR Q + IFL+MGF
Sbjct:  102 KVGFSKAMSNKWIRLDKAAEGGPRIYRVVDSIEDTVKEKLQLILKGRADDVNEKDRNELKKRKLVNEVTVKSYWVTKGSGFSTSITKQETDLTPEMIASGSWREKQFKGYNFDALGVMPECGHLHPLLKVRTQFRQIFLEMGF 244          

HSP 2 Score: 63.929 bits (154), Expect = 2.076e-36
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM TNNF+E +FWNFDALFQPQ+HPARD  D F
Sbjct:  236 RQIFLEMGFTEMPTNNFIESSFWNFDALFQPQQHPARDQHDTF 278          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_DROME (Probable phenylalanyl-tRNA synthetase alpha chain OS=Drosophila melanogaster GN=CG2263 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.721e-35
Identity = 60/142 (42.25%), Postives = 83/142 (58.45%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEMGKQVS-----RKVQNVEDKVKDLLLQVQ--NGHALSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  + W+ + K V+     RKV  + D V++ L QV    G  L  +E+   K RKL+   T K + + +GP +A    K+ TDLT E L  G W +L+FK YNF+A G P   GHL PLLKVR + + IFL+MGF
Sbjct:  101 KVGFSKAMSHGWILVDKSVTPPLVRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFATTLTKLETDLTVEMLANGLWDQLKFKAYNFDALGAPPTRGHLHPLLKVRTEFRQIFLEMGF 242          

HSP 2 Score: 62.7734 bits (151), Expect = 1.721e-35
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM TNN+VE +FWNFDAL+QPQ+HPARD+ D F
Sbjct:  234 RQIFLEMGFSEMPTNNYVESSFWNFDALYQPQQHPARDAHDTF 276          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_RAT (Phenylalanyl-tRNA synthetase alpha chain OS=Rattus norvegicus GN=Farsa PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 4.952e-35
Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ +      G +V R V ++ED+V+  L QVQ G A  L+++E   L+ RKL+     K Y V KG  ++    K   +L+ E +  G W++  FK YNF+A+G   + GHL PLLKVR Q + IFL+MGF
Sbjct:  101 KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQRRLQQVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKGFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGF 243          

HSP 2 Score: 62.003 bits (149), Expect = 4.952e-35
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM T+NF+E +FWNFDALFQPQ+HPARD  D F
Sbjct:  235 RQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTF 277          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_MOUSE (Phenylalanyl-tRNA synthetase alpha chain OS=Mus musculus GN=Farsa PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.102e-34
Identity = 58/143 (40.56%), Postives = 84/143 (58.74%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ +      G +V R V ++ED+V+  L  VQ G A  L+++E   L+ RKL+     K Y V KG  ++    K   +L+ E +  G W++  FK YNF+A+G   + GHL PLLKVR Q + IFL+MGF
Sbjct:  101 KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSIEDEVQKRLQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGKAFSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLEMGF 243          

HSP 2 Score: 62.003 bits (149), Expect = 4.102e-34
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM T+NF+E +FWNFDALFQPQ+HPARD  D F
Sbjct:  235 RQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTF 277          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_HUMAN (Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 6.958e-34
Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ +      G +V R V ++ED+V+  L  V+ G A  L ++E   L+ RKL+   T K Y V KG  ++    K  T+L+ E +  G W++  FK YNF A G   + GHL PLLKVR Q + IFL+MGF
Sbjct:  101 KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVTLKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGF 243          

HSP 2 Score: 62.003 bits (149), Expect = 6.958e-34
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM T+NF+E +FWNFDALFQPQ+HPARD  D F
Sbjct:  235 RQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTF 277          
BLAST of EY735093 vs. ExPASy Swiss-Prot
Match: SYFA_PONAB (Phenylalanyl-tRNA synthetase alpha chain OS=Pongo abelii GN=FARSA PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.396e-33
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 2
Query:   77 KIGCSQAGKNKWVEM------GKQVSRKVQNVEDKVKDLLLQVQNGHA--LSKEEIGSLKARKLIVPQTWKGYSVRKGPNYAPKRKKVATDLTRENLQKGDWKELEFKEYNFNAKGHPAEGGHLQPLLKVRKQLKDIFLQMGF 481
            K+G S+A  NKW+ +      G +V R V ++ED+V+  L  V+ G A  L ++E   L+ RKL+     K Y V KG  ++    K  T+L+ E +  G W++  FK YNF A G   + GHL PLLKVR Q + IFL+MGF
Sbjct:  101 KVGFSKAMSNKWIRVDKSAADGPRVFRVVDSMEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLAEVILKTYWVSKGSAFSTSISKQETELSPEMISSGSWRDRPFKPYNFLAHGVLPDSGHLHPLLKVRSQFRQIFLEMGF 243          

HSP 2 Score: 62.003 bits (149), Expect = 3.396e-33
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 3
Query:  456 RTYFSRWVFEEMATNNFVERNFWNFDALFQPQKHPARDSLDNF 584
            R  F    F EM T+NF+E +FWNFDALFQPQ+HPARD  D F
Sbjct:  235 RQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTF 277          
The following BLAST results are available for this feature:
BLAST of EY735093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
SYFA_ARATH2.991e-7681.08Probable phenylalanyl-tRNA synthetase alpha chain ... [more]
SYFA_DANRE5.122e-3844.06Phenylalanyl-tRNA synthetase alpha chain OS=Danio ... [more]
SYFA_CHICK1.925e-3745.45Phenylalanyl-tRNA synthetase alpha chain OS=Gallus... [more]
SYFAB_XENLA7.209e-3744.06Phenylalanyl-tRNA synthetase alpha chain B OS=Xeno... [more]
SYFAA_XENLA2.076e-3642.66Phenylalanyl-tRNA synthetase alpha chain A OS=Xeno... [more]
SYFA_DROME1.721e-3542.25Probable phenylalanyl-tRNA synthetase alpha chain ... [more]
SYFA_RAT4.952e-3541.26Phenylalanyl-tRNA synthetase alpha chain OS=Rattus... [more]
SYFA_MOUSE4.102e-3440.56Phenylalanyl-tRNA synthetase alpha chain OS=Mus mu... [more]
SYFA_HUMAN6.958e-3441.26Phenylalanyl-tRNA synthetase alpha chain OS=Homo s... [more]
SYFA_PONAB3.396e-3340.56Phenylalanyl-tRNA synthetase alpha chain OS=Pongo ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735093 ID=EY735093; Name=EY735093; organism=Citrus sinensis; type=EST; length=914bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCGAAAGACGAATTGC
AGAAAAAGCTTGATCCTGCAGTTTTCAAAATAGGTTGCTCCCAGGCTGGT
AAAAATAAGTGGGTGGAGATGGGGAAGCAAGTTTCGAGGAAGGTTCAAAA
TGTGGAAGACAAAGTCAAAGATTTGCTTCTACAAGTACAAAATGGACATG
CACTTAGCAAAGAGGAGATTGGCAGTCTCAAAGCACGGAAGCTTATTGTT
CCCCAGACATGGAAGGGGTACTCAGTGAGAAAAGGTCCTAATTATGCTCC
CAAAAGGAAGAAAGTTGCTACAGATTTGACTCGAGAGAACCTTCAGAAGG
GTGATTGGAAGGAATTGGAGTTCAAAGAGTACAACTTCAATGCTAAAGGA
CACCCTGCGGAAGGTGGCCATCTTCAACCACTGCTCAAGGTGCGGAAGCA
ATTGAAGGACATATTTCTCCAGATGGGTTTTTGAGGAGATGGCGACAAAC
AATTTTGTTGAAAGAAACTTCTGGAACTTTGATGCCTTGTTCCAGCCCCA
AAAACACCCTGCCCGGGATTCTCTTGATAACTTCTTATCTGGAAGAACCT
TTCCTCTACAAGGAACTTACCAAAGATTATGTTGAGGGGGTGGAACCGGG
GGCCCGAATTTGGGGGGTATTGGGTCCCAAGGAATAGGGTTTAGCGGAAA
AAAAAAGGAAACAAAAAAAGACCTTTTGGGGATTACAAGAATGGGTGGTA
CCTTTCCGAAAGGTTAGAGGCGTGGATTGAAAAACCTTTTACCCAAGAAG
GATGTTCCCGAAGAAACCGGGGCTTAGCAATGAGTATTGGTGGATTAAGA
CAAACCTGGGGGATATCAACAAGAATAAAGAGGGTGCAGGATGGGAAATG
GGATAATCCTCGGT
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