EY735088

Overview
NameEY735088
Unique NameEY735088
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX12_ARATH (Probable pyridoxal biosynthesis protein PDX1.2 OS=Arabidopsis thaliana GN=PDX12 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.178e-67
Identity = 85/111 (76.58%), Postives = 99/111 (89.19%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCEWGGCGNRGF 660
            ++ GEALRRIREGAAMIRIQGDL  +GNI ETVKNVRSLMG++R+LNNMD+DEVFTFAKKI+APYDLVAQTKQMGR+PVVQFA+GG+ TPADAALMM +GC+    G+  F
Sbjct:  150 RDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKISAPYDLVAQTKQMGRVPVVQFASGGITTPADAALMMQLGCDGVFVGSEVF 260          

HSP 2 Score: 105.145 bits (261), Expect = 1.178e-67
Identity = 53/71 (74.65%), Postives = 63/71 (88.73%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP--SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            IVEVSSV QAK+AE+AGACS++VS+P  SR G++RMPDP L+K VKRAVSVPVM+R RVGHFVEAQILE +
Sbjct:   46 IVEVSSVNQAKLAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESL 116          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.937e-56
Identity = 79/102 (77.45%), Postives = 93/102 (91.18%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRIREGAAMIR +G+   +GN++E V++VRS+MGDIR+L NMD+DEVFTFAKKIAAPYDLV QTKQ+GRLPVVQFAAGGV TPADAALMM +GC+
Sbjct:  146 RNLGEALRRIREGAAMIRTKGEA-GTGNVIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCD 246          

HSP 2 Score: 78.9518 bits (193), Expect = 3.937e-56
Identity = 38/75 (50.67%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP L+K +K++V++PVM++ R+GHFVEAQILE I
Sbjct:   38 IMDVVNPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAI 112          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX13_ARATH (Pyridoxal biosynthesis protein PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 1.137e-55
Identity = 78/102 (76.47%), Postives = 92/102 (90.20%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRIREGAAMIR +G+   +GNI+E V++VRS+ GDIR+L NMD+DEVFTFAKK+AAPYDLV QTKQ+GRLPVVQFAAGGV TPADAALMM +GC+
Sbjct:  146 RNLGEALRRIREGAAMIRTKGEA-GTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCD 246          

HSP 2 Score: 80.1073 bits (196), Expect = 1.137e-55
Identity = 38/75 (50.67%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP ++K +K+AV++PVM++ R+GHFVEAQILE I
Sbjct:   38 IMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAI 112          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal biosynthesis protein PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 3.285e-55
Identity = 77/102 (75.49%), Postives = 90/102 (88.24%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRIREGAAMIR +G+   +GNI+E V++VRS+M DIR+L NMD+DEVFTFAK IAAPYDLV QTKQ+GRLPVV FAAGGV TPADAALMM +GC+
Sbjct:  149 RNLGEALRRIREGAAMIRTKGEA-GTGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALMMQLGCD 249          

HSP 2 Score: 81.2629 bits (199), Expect = 3.285e-55
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + +QA+IAE AGAC++M  E       ++ G+ RM DP L+K +KRAV++PVM++ R+GHFVEAQILE I
Sbjct:   41 IMDVVNADQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAI 115          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX11_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.237e-54
Identity = 76/102 (74.51%), Postives = 92/102 (90.20%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++LGEALRRIREGAAMIR +G+   +GN+VE V++VRS+MGDIR L NMD+DEVF++AK+IAAPYDLV QTKQ+GRLPVVQFAAGGV TPADAALMM +GC+
Sbjct:  155 RDLGEALRRIREGAAMIRTKGEA-GTGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCD 255          

HSP 2 Score: 80.4925 bits (197), Expect = 1.237e-54
Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP L++ +KRAV++PVM++ R+GHFVEAQILE I
Sbjct:   47 IMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAI 121          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX11_ARATH (Pyridoxal biosynthesis protein PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.345e-53
Identity = 75/102 (73.53%), Postives = 91/102 (89.22%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRIREGAAMIR +G+   +GN+VE V++VRS+ G IR+L +MD+DEVFT+AKKIAAPYDLV QTK++GRLPVVQFAAGGV TPADAALMM +GC+
Sbjct:  147 RNLGEALRRIREGAAMIRTKGEA-GTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKELGRLPVVQFAAGGVATPADAALMMQLGCD 247          

HSP 2 Score: 79.7221 bits (195), Expect = 1.345e-53
Identity = 38/75 (50.67%), Postives = 55/75 (73.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP ++K +K AV++PVM++ R+GHFVEAQILE I
Sbjct:   39 IMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAI 113          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX12_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.2 OS=Oryza sativa subsp. japonica GN=PDX12 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 5.063e-53
Identity = 75/102 (73.53%), Postives = 92/102 (90.20%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            ++LGEALRRIREGAAMIR +G+   +GN+VE V++VRS+MGDIR L +MD+DEVF++AK+IAAPYDLV QTKQ+GRLPVVQFAAGGV TPADAALMM +GC+
Sbjct:  148 RDLGEALRRIREGAAMIRTKGEA-GTGNVVEAVRHVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALMMQLGCD 248          

HSP 2 Score: 77.0258 bits (188), Expect = 5.063e-53
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGAC++M  E       ++ G+ RM DP L++ +KR+V++PVM++ R+GH VEAQILE I
Sbjct:   40 IMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRSVTIPVMAKARIGHLVEAQILEAI 114          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.016e-50
Identity = 71/102 (69.61%), Postives = 89/102 (87.25%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRI EGAAMIR +G+   +GN++E V++VRS++GDIR L ++D+DEVF FAK+IAAPY+LV QTKQ+GRLPVV FAAGGV TPADAALMM +GC+
Sbjct:  146 RNLGEALRRIAEGAAMIRTKGEA-GTGNVIEAVRHVRSVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTKQLGRLPVVNFAAGGVATPADAALMMQLGCD 246          

HSP 2 Score: 76.2554 bits (186), Expect = 1.016e-50
Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP L+K +K AV++PVM++ R+GHFVEAQILE I
Sbjct:   38 IMDVVNAEQARIAEEAGATAVMALERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAI 112          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDX1_SCHPO (Probable pyridoxine biosynthesis PDX1-like protein OS=Schizosaccharomyces pombe GN=snz1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.754e-47
Identity = 61/102 (59.80%), Postives = 82/102 (80.39%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRRI EGAAMIR +G+   +G++VE V++ R + G++R + +M  DE++T+AK+IAAP DLV +  Q+GRLPVV FAAGGV TPADAALMM +GC+
Sbjct:  132 RNLGEALRRISEGAAMIRTKGEA-GTGDVVEAVRHTRQMQGELRRVKSMSPDELYTYAKEIAAPIDLVKECAQLGRLPVVNFAAGGVATPADAALMMQLGCD 232          

HSP 2 Score: 83.9593 bits (206), Expect = 3.754e-47
Identity = 41/75 (54.67%), Postives = 58/75 (77.33%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAEAAGAC++M  E       ++ G+ RM DPS++K ++ AVS+PVM++VR+GHFVEAQILE I
Sbjct:   24 IMDVVNAEQARIAEAAGACAVMALERVPADIRAQGGVARMSDPSMIKEIQAAVSIPVMAKVRIGHFVEAQILESI 98          
BLAST of EY735088 vs. ExPASy Swiss-Prot
Match: PDXS_ROSS1 (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus sp. (strain RS-1) GN=pdxS PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.800e-43
Identity = 60/102 (58.82%), Postives = 81/102 (79.41%), Query Frame = 1
Query:  328 KNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFTFAKKIAAPYDLVAQTKQMGRLPVVQFAAGGVVTPADAALMMAVGCE 633
            +NLGEALRR+ EGAAM+R +G+   +GN+VE V++ R++  +IR L +MDEDE+FT+AK I APY+LV Q  + GRLPVV FAAGG+ TPADAAL+M +G +
Sbjct:  129 RNLGEALRRVAEGAAMLRTKGEA-GTGNVVEAVRHARAVYSEIRRLQSMDEDELFTYAKNIQAPYELVRQVAETGRLPVVNFAAGGIATPADAALLMQLGVD 229          

HSP 2 Score: 72.7886 bits (177), Expect = 1.800e-43
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 2
Query:  128 IVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILERI 334
            I++V + EQA+IAE AGA ++M  E       ++ G+ RM DP L+ ++K AV++PVM++ R+GHFVEAQILE +
Sbjct:   21 IMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKEAVTIPVMAKARIGHFVEAQILEAL 95          
The following BLAST results are available for this feature:
BLAST of EY735088 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
PDX12_ARATH1.178e-6776.58Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDX1_HEVBR3.937e-5677.45Probable pyridoxal biosynthesis protein PDX1 OS=He... [more]
PDX13_ARATH1.137e-5576.47Pyridoxal biosynthesis protein PDX1.3 OS=Arabidops... [more]
PDX1_PHAVU3.285e-5575.49Pyridoxal biosynthesis protein PDX1 OS=Phaseolus v... [more]
PDX11_ORYSJ1.237e-5474.51Probable pyridoxal biosynthesis protein PDX1.1 OS=... [more]
PDX11_ARATH1.345e-5373.53Pyridoxal biosynthesis protein PDX1.1 OS=Arabidops... [more]
PDX12_ORYSJ5.063e-5373.53Probable pyridoxal biosynthesis protein PDX1.2 OS=... [more]
PDX1_GINBI1.016e-5069.61Probable pyridoxal biosynthesis protein PDX1 OS=Gi... [more]
PDX1_SCHPO3.754e-4759.80Probable pyridoxine biosynthesis PDX1-like protein... [more]
PDXS_ROSS11.800e-4358.82Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-082-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735088 ID=EY735088; Name=EY735088; organism=Citrus sinensis; type=EST; length=1026bp
ANAAGAAGGGACGAGGGGGGGGANTGAANNNNNCCCAAANNNNNAAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCCGACCCACGCGTCCGC
GGACGCGNNNTGGTCGGACGCGTGGGCATTGTTGAAGTCTCCAGTGTGGA
ACAAGCCAAGATCGCCGAAGCAGCTGGCGCCTGTTCTATCATGGTATCCG
AGCCCAGCCGGCCCGGCATTAAGCGCATGCCGGATCCTTCTCTTGTTAAA
AGCGTTAAACGCGCCGTTTCAGTCCCCGTTATGTCACGTGTTCGTGTTGG
GCATTTTGTTGAAGCGCAGATTCTTGAAAGAATCTTGGTGAAGCTTTGAG
GAGAATTAGAGAAGGAGCTGCTATGATAAGAATACAAGGGGATTTGTTAA
ATTCTGGTAATATTGTCGAGACTGTTAAAAATGTGAGGTCGTTAATGGGA
GATATTCGAATTTTGAATAACATGGATGAAGATGAGGTCTTCACGTTTGC
TAAGAAGATAGCGGCTCCGTATGATTTGGTGGCTCAAACTAAACAAATGG
GAAGGTTGCCCGTGGTGCAATTTGCTGCAGGAGGGGTTGTGACACCTGCT
GATGCCGCCCTGATGATGGCAGTGGGATGTGAATGGGGTGGTTGTGGGAA
TCGAGGTTTTTGAGTGCTCAAATCCGCACAAGGAAGTGGAGGGGGTATGG
GCGCCGCCTGTTAGGCCTAAAAACTGGACCCGCCGCGGCTCGGGGGGAAG
GGGCACGTGCGCGATAGCACGAACGCGCATTGCGGGGGAAGTCGCCGGGC
GGTGAGGAAGGAACCAGAAATGGAAGGTCGCAAAGAAGCGAGGTAACGGA
ATGAGCCCCCCATAAGGCCCCCTCCCGTCGCTCCTGCCCCCATCTCGCCC
CACNCTCGCCACCACAGGGCGGGCGCGGAGGCGCGGGCGGGCATGGCGTG
ACGCCGGGCCCCGGCGGTGCCGCCGTCGCGGGTGACCGGCCGCCGCGCCG
GACGCTCGCCTCGCGGTGGCGGAGGG
back to top