EY735019

Overview
NameEY735019
Unique NameEY735019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY735019 vs. ExPASy Swiss-Prot
Match: C3H44_ARATH (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana GN=At3g51120 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.249e-12
Identity = 64/174 (36.78%), Postives = 82/174 (47.13%), Query Frame = 1 
Query:  124 WQAMVVPEPDEFTTLGDESVSDLLAEVEAMESLNRFASPTSDMRCGME---FSPENDCFSPIGGLSPTPDAGKSDAXXXXXXXXXXXXXTVTDEPIGVSQAEVLDPHKRSDGRSSMSAEVEDDTKPSDDSINQCEVGSKIQPALPPVT-SWDITAMDTSWSLGSETASISQGAV 633
            W A +V +PDE     DESVSDLLAEVEAME     +SPTS   C  +     PE D F+P+  +S TP+  + D                      VSQ  +LD    S G+SSM  E +D+T  S       E+     P  PP   S D+T   T+  LGSET ++  G V
Sbjct:  972 WPA-IVADPDEC----DESVSDLLAEVEAMEQNGLPSSPTSTFHCDDDDDLKGPEKDFFNPVARMSLTPETCRLD----------------------VSQTSILD--NVSAGKSSMLTEAKDNTPFSHCGTAGPELLLFAPPPPPPTAISHDLTLTTTALRLGSET-TVEAGTV 1115
The following BLAST results are available for this feature:
BLAST of EY735019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C3H44_ARATH5.249e-1236.78Zinc finger CCCH domain-containing protein 44 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-075-D05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735019 ID=EY735019; Name=EY735019; organism=Citrus sinensis; type=EST; length=907bp
TTAAATGTAGGGGCTGCACGCAGTACGGTCGGGATTCCGGGTCGACCCAC
GCGTCCGCAACATCAGGAAGTTGCCACCCCTACGCATTCTTCTCCTTCAC
ACCTTTCATCTAATGCAGCTAGTTGGCAGGCCATGGTTGTCCCTGAACCT
GATGAGTTCACCACTTTGGGAGATGAATCAGTTTCAGATCTGCTGGCTGA
AGTTGAAGCAATGGAGTCGCTTAATCGCTTTGCTTCTCCTACTTCAGATA
TGCGTTGTGGTATGGAATTCTCTCCTGAAAATGATTGTTTTAGCCCTATA
GGGGGTTTGAGCCCAACACCTGATGCAGGAAAAAGTGATGCCTTGAGCTC
CAGTAGTGATTTACAAGTGCATTCTCATTCAACTGTGACAGACGAACCAA
TTGGAGTATCTCAAGCTGAAGTTCTTGATCCTCACAAAAGATCTGATGGG
CGCTCTTCCATGAGTGCTGAGGTGGAAGACGACACGAAGCCTAGTGATGA
TTCAATAAATCAATGTGAAGTTGGTTCAAAGATCCAACCTGCTTTACCAC
CTGTCACGAGTTGGGACATTACTGCCATGGACACTTCTTGGAGCCTGGGG
TCGGAAACTGCAAGTATTAGCCAGGGAGCTGTGCATGGTAATTCAAACTT
GGCAATGGGGGGATTCTCTCACGAGAGGATTGAGGACATGGGTTTGGGAG
CTGCTCAGTGGACTGCTCAAGAGCATTTTGACGTGAATATGGGGACATCC
ATAAGAAAACCCAGACATTTTGGGAAACCATCCCTAGGTATTGTGGGGAA
CAAATTTTCTGGGTCAAAAAACCATGGTTTTTCTGGGGGGAAATTCTATT
TTTGAGAAGGGGCAGCTTGGGAATGGAATGGGGAAGGGGAAATTTTGATG
GTTAAAA
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