EY734966

Overview
NameEY734966
Unique NameEY734966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_WHEAT (Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24
Identity = 59/161 (36.65%), Postives = 91/161 (56.52%), Query Frame = 3
Query:    6 RPKIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKPR-----NDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGDIAGD 467
            R ++ +K+ G++WWY+  +HAAELTAGYYN  ++DGY  +  +L +H  +M F CA    S Q +EA + PE L  QVL+  W  GL VA ENAL  YD      ++  A+P+       P+ + F F   +  + LL+G   ++    F++ MH ++  D
Sbjct:  287 RVQLAIKISGIHWWYRVPNHAAELTAGYYNLDDRDGYRTIARMLTRHHASMNFTCAEMRDSEQSEEAKSAPEELVQQVLSAGWREGLHVACENALGRYDATAYNTILRNARPKGINKNGPPEHKLFGFTYLRLSNELLEG-QNYATFQTFVEKMHANLGHD 446          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_HORSP (Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.306e-23
Identity = 58/159 (36.48%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   12 KIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKPR-----NDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGDIAGD 467
            ++ +K+ G++WWYK  SHAAELTAGYYN  ++DGY  +  +LK+H  ++ F CA    S Q  +A++ PE L  QVL+  W  GL VA ENAL  YD      ++  A+P        P+ + F F   +  + L++G   + +   F+  MH ++  D
Sbjct:  289 QLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDSEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEG-QNYVNFKTFVDRMHANLPRD 446          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_HORVU (Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.122e-22
Identity = 57/159 (35.85%), Postives = 88/159 (55.35%), Query Frame = 3
Query:   12 KIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKPR-----NDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGDIAGD 467
            ++ +K+ G++WWYK  SHAAELTAGYYN  ++DGY  +  +LK+H  ++ F CA      Q  +A++ PE L  QVL+  W  GL VA ENAL  YD      ++  A+P        P+ + F F   +  + L++G   + +   F+  MH ++  D
Sbjct:  289 QLAIKISGIHWWYKVPSHAAELTAGYYNLHDRDGYRTIARMLKRHRASINFTCAEMRDLEQSSQAMSAPEELVQQVLSAGWREGLNVACENALPRYDPTAYNTILRNARPHGINQSGPPEHKLFGFTYLRLSNQLVEG-QNYVNFKTFVDRMHANLPRD 446          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_MAIZE (Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 7.032e-22
Identity = 57/155 (36.77%), Postives = 84/155 (54.19%), Query Frame = 3
Query:   12 KIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKP----RNDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGDI 458
            ++ +KV G++WWY   +HAAELTAGYYN  ++DGY  +  +L +H  +M F CA    S Q  EA + PE L  QVL+  W  GL +A ENAL+ YD      ++  A+P    +N P       F Y + S  L     ++    F++ MH ++
Sbjct:  289 QLAIKVSGIHWWYNVPNHAAELTAGYYNLDDRDGYRTIAHMLTRHRASMNFTCAEMRDSEQSSEAKSAPEELVQQVLSAGWREGLNLACENALNRYDATAYNTILRNARPQGINKNGPPEHKLHGFTYLRVSDELFQEQNYTTFKTFVRRMHANL 443          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_MEDSA (Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.199e-21
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 3
Query:   12 KIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKP----RNDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGD 455
            K+ +KV G++WWYK  +HAAELTAGYYN  ++DGY P+ +++ +H   + F C     S Q  +A + P+ L  QVL+  W   + VAGENALS YD     +++  A+P    ++ P +       Y + S  L     F     F+  MH D
Sbjct:  292 KLAIKVSGIHWWYKAPNHAAELTAGYYNLDDRDGYRPIAKIVSRHHAILNFTCLEMRDSEQSSDAHSSPQKLVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLMQQSNFDIFKKFVVKMHAD 445          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_SOYBN (Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 1.567e-21
Identity = 58/154 (37.66%), Postives = 83/154 (53.90%), Query Frame = 3
Query:   12 KIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKPR----NDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGD 455
            K+ +KV G++WWYK  +HAAELTAGYYN +++DGY P+  +L +H   + F C     S Q  +A + P+ L  QVL+  W   + VAGENAL  YD     +++  AKP+    N P +       Y + S  L     F+    F+  MH D
Sbjct:  292 KLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDGYRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQQVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVNNNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD 445          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_IPOBA (Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4)

HSP 1 Score: 103.219 bits (256), Expect = 2.046e-21
Identity = 60/157 (38.22%), Postives = 81/157 (51.59%), Query Frame = 3
Query:    6 RPKIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKPR----NDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGDI 458
            R  I  KV G++WWY   SHAAELTAG+YN + +DGY P+  +L +H  T+ F C     S Q  EA + P+ L  QVL+  W   + VAGENAL  YD     +++   +P     N P +   S   Y + S  L     F     F+K MH D+
Sbjct:  292 RVNIAAKVSGIHWWYNHVSHAAELTAGFYNVAGRDGYRPIARMLARHHATLNFTCLEMRDSEQPAEAKSAPQELVQQVLSSGWKEYIDVAGENALPRYDATAYNQMLLNVRPNGVNLNGPPKLKMSGLTYLRLSDDLLQTDNFELFKKFVKKMHADL 448          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_VIGUN (Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 55/153 (35.95%), Postives = 83/153 (54.25%), Query Frame = 3
Query:   15 IIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKP----RNDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGD 455
            + +KV G++WWYK  +HAAELTAGYYN  ++DGY P+ +++ +H  ++ F C     S Q  +A + P+ L  QVL+  W   + VAGENALS YD     +++  A+P    ++ P +       Y + S  L     F     F+  MH D
Sbjct:  293 LAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHASLNFTCLEMRDSEQSSDAQSGPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKHRMYGVTYLRLSDELLQQSNFDIFKKFVVKMHAD 445          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_TRIRP (Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.015e-20
Identity = 56/154 (36.36%), Postives = 83/154 (53.90%), Query Frame = 3
Query:   12 KIIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAV--PSLQDQEALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKP----RNDPDRRHFSFFMYQQPSSLLQGIICFSDLGYFIKCMHGD 455
            K+ +KV G++WWYK  +HAAELTAGYYN  ++DGY P+ +++ +H   + F C     S Q  +A + P+ L  QVL+  W   + VAGENALS YD     +++  A+P    ++ P +       Y + S  L     F     F+  MH D
Sbjct:  292 KLAIKVSGIHWWYKAQNHAAELTAGYYNLDDRDGYRPIAKMVSRHHGILNFTCLEMRDSEQSSDAQSAPQELVQQVLSGGWRENIEVAGENALSRYDATAYNQIILNARPQGVNKDGPPKLRMYGVTYLRLSDDLLQESNFEIFKKFVVKMHAD 445          
BLAST of EY734966 vs. ExPASy Swiss-Prot
Match: AMYB_ARATH (Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18
Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 3
Query:   15 IIVKVPGVYWWYKTASHAAELTAGYYNPSNQDGYAPVFEVLKKHSVTMKFVCAVPSLQDQ--EALADPEGLSWQVLNLAWDRGLAVAGENALSCYDREGCMRVVEMAKP 335
            +  KV G++W Y   SHAAELTAGYYN   +DGY P+  +L KH   + F C      D   EAL+ P+ L  +VL+ AW  G+ VAGENAL  Y  +G  +++  A+P
Sbjct:  295 LAAKVSGIHWLYNHHSHAAELTAGYYNLFKRDGYRPIARMLSKHYGILNFTCLEMKDTDNTAEALSAPQELVQEVLSKAWKEGIEVAGENALETYGAKGYNQILLNARP 403          
The following BLAST results are available for this feature:
BLAST of EY734966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
AMYB_WHEAT9.812e-2436.65Beta-amylase OS=Triticum aestivum GN=BMY1 PE=2 SV=... [more]
AMYB_HORSP8.306e-2336.48Beta-amylase OS=Hordeum spontaneum GN=BMY1 PE=1 SV... [more]
AMYB_HORVU4.122e-2235.85Beta-amylase OS=Hordeum vulgare GN=BMY1 PE=1 SV=1[more]
AMYB_MAIZE7.032e-2236.77Beta-amylase OS=Zea mays GN=BMY1 PE=2 SV=1[more]
AMYB_MEDSA1.199e-2136.36Beta-amylase OS=Medicago sativa GN=BMY1 PE=2 SV=1[more]
AMYB_SOYBN1.567e-2137.66Beta-amylase OS=Glycine max GN=BMY1 PE=1 SV=3[more]
AMYB_IPOBA2.046e-2138.22Beta-amylase OS=Ipomoea batatas GN=BMY1 PE=1 SV=4[more]
AMYB_VIGUN3.490e-2135.95Beta-amylase OS=Vigna unguiculata GN=BMY1 PE=2 SV=... [more]
AMYB_TRIRP1.015e-2036.36Beta-amylase OS=Trifolium repens GN=BMY1 PE=2 SV=1[more]
AMYB_ARATH1.241e-1844.04Beta-amylase OS=Arabidopsis thaliana GN=BMY1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-108-G03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734966 ID=EY734966; Name=EY734966; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGAAGATTATTGTTAAGGTTCCTGGGGTTTATTGGTGGTAC
AAGACAGCCAGCCATGCTGCAGAGTTAACAGCAGGATACTATAATCCTTC
AAATCAGGATGGATATGCTCCAGTTTTTGAGGTTCTCAAGAAGCACTCAG
TTACAATGAAGTTTGTGTGTGCGGTTCCTAGCCTGCAGGATCAGGAAGCT
CTGGCTGACCCCGAAGGTTTGAGTTGGCAGGTTCTTAATTTGGCCTGGGA
TCGAGGATTGGCTGTAGCTGGTGAGAATGCACTTTCATGTTATGACAGAG
AAGGGTGCATGAGAGTAGTCGAGATGGCAAAGCCAAGAAATGATCCTGAT
CGCCGTCACTTCTCATTCTTTATGTATCAACAACCATCTTCTTTGCTTCA
GGGGATAATTTGCTTCTCAGATCTGGGTTATTTTATTAAATGCATGCACG
GAGATATCGCAGGCGATCTGCTGCCCTAATAGTTAAGTGTACGTTTACCT
CCCATCTANGGTATCAACAGTCACTGGACATTCTGGGTGAAGGGGTTGGC
GACATGAAGTGTATAGTTTCGGATGTGGGTGAAAAGACCACATGGATCCA
GGTTCTGTGGAAATCTCTGGTTTCGGTAGCTGGTACGTCATTGCTACGCA
GATCATATTTTCTAACTGCAAACAGTATCGGAGAATGTAAGAGATGGGTG
TGGGAAATAACCTCCATGATCCTATTTATGCTTTGGGTGGGATTATAGAA
AGGAAGAAAAAACTCTTGGAATTTTCCTATTCAGATAATTTGAAGGGAAA
AGGGAAAAAATTTTTTGCTCCTTTCCAGAAGAAGCCATTTGGCGGGAAAA
AAAAAGGGCCCGCTTTTTGAAAAAAGAAGCCCAGACGGT
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