EY734955
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP2_PONAB (Gamma-tubulin complex component 2 OS=Pongo abelii GN=TUBGCP2 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38 Identity = 78/176 (44.32%), Postives = 118/176 (67.05%), Query Frame = 3 Query: 189 YLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLE-QPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAW 713 Y+E ++ A+ +AS LL+ + E +L+ LRSIKRY L+DQGDF VHFMD+A EEL K +++IT +L++LL++ALR + A DP +DL + L+ ++ + +E K + ++++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+ KHVER L W Sbjct: 484 YVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELTLSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVW 659
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP2_HUMAN (Gamma-tubulin complex component 2 OS=Homo sapiens GN=TUBGCP2 PE=1 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 3.036e-38 Identity = 78/176 (44.32%), Postives = 118/176 (67.05%), Query Frame = 3 Query: 189 YLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLE-QPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAW 713 Y+E ++ A+ +AS LL+ + E +L+ LRSIKRY L+DQGDF VHFMD+A EEL K +++IT +L++LL++ALR + A DP +DL + L+ ++ + +E K + ++++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+ KHVER L W Sbjct: 484 YVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDPFKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHADPTELALSGLEAFSFDYIVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVW 659
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP2_MOUSE (Gamma-tubulin complex component 2 OS=Mus musculus GN=Tubgcp2 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.765e-38 Identity = 79/180 (43.89%), Postives = 120/180 (66.67%), Query Frame = 3 Query: 189 YLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIK-----TSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAW 713 Y+E ++ A+ +AS LL+ + E +L+ LRSIKRY L+DQGDF VHFMD+ EEL K +++I + +L++LL++ALR + A DP +DL + L+ ++ + +E K T +D +L +++GLE FS Y V+WPLS++I+RKALT+YQM+FR +F+ KHVER L W Sbjct: 484 YVEQIEKAFNYASKVLLDFLMEEKELVAHLRSIKRYFLMDQGDFFVHFMDLTEEELRKPVEDIILTRLEALLELALRMSTANTDPFKDDLKIELMPHDLITQLLRVLAIETKQEKAMTHADPTEL----TLSGLEAFSFDYMVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVW 659
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP2_DROME (Gamma-tubulin complex component 2 homolog OS=Drosophila melanogaster GN=Grip84 PE=1 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.614e-31 Identity = 73/193 (37.82%), Postives = 118/193 (61.14%), Query Frame = 3 Query: 138 VPTSENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQ 716 +PT E + S H + + AY FA+ LL+++ DLMG L+S+KRYLLL+QGDF + FMD +EL K +D + L++LL + LR ++A DP +DL C + L+ +M+ +I ++ + + ++GLE F+ +Y+V+WP S+V++ +++KYQM+FR LF+ KHVER L W+ Sbjct: 457 MPTQEMNLEFDPTSERH-VSVINDAYYFAARMLLDVLLTENDLMGHLQSVKRYLLLNQGDFTMQFMDACEDELTKNVDHVLPMTLENLLGLTLRISSARNDPYKDDLHCELLPYDLVTQMS-----KIMKKEENWQAQPRLDLSGLECFAFTYEVKWPCSLVLNHISISKYQMLFRQLFYCKHVERQLCKIWK 643
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: SPC97_DICDI (Spindle pole body component 97 OS=Dictyostelium discoideum GN=spc97 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 9.791e-29 Identity = 78/236 (33.05%), Postives = 124/236 (52.54%), Query Frame = 3 Query: 138 VPTSENSKLLSFGSNHH-YLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR-STAAAADPCHEDLTCSVERSSLLKRMATLKGVE---------------------IKTSSDSVDLEQPVSIT-----------------GLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQVHQ 725 +PT+ ++ + N + Y++ ++ AY++ASG LLNL+ L+ +L++IK Y LL +GDF HFMD +EL K LD+I + K+ SLL ++LR S+ + D +DL C L+ ++ + + TSS++ + V+ T G+E+ + +Y V WPLS++ISRK+L KYQ++FR LF KHVE+ L W HQ Sbjct: 736 IPTT----IIEYSKNENVYIDKIEKAYDYASGILLNLLINERHLISRLKAIKHYFLLCKGDFFSHFMDTTYDELKKPLDQINMVKMNSLLQLSLRTSSISEEDEFKDDLECEFIPYKLVDQLLNIININNFNNPTTTTTTNTSSNNITATTNTSSNNTTINTTVNTTLIQSTSAHEVLKTNKLFGIESLAFNYNVGWPLSLIISRKSLIKYQIIFRHLFLCKHVEKVLVDTWSQHQ 967
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: ALP4_SCHPO (Spindle pole body component alp4 OS=Schizosaccharomyces pombe GN=alp4 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.259e-24 Identity = 75/212 (35.38%), Postives = 106/212 (50.00%), Query Frame = 3 Query: 210 AYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALR--STAAAADPCHEDLTCSVERSSL---LKRMATLKGVEIKTSS-------DSVDLEQPV-------------------------SITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQVHQGSS 734 AY +A+ LL L++ L L S+K Y LDQ DF F+D A+ EL K I++ KLQS LD+ALR T A DP E +T V ++SL L + ++ G+E TSS +S+ + V I G ET L YKV +PLS+++SRKA+ +YQ++FR +HVE L +W H +S Sbjct: 405 AYVYANESLLQLLQSSQSLYAHLYSLKHYFFLDQSDFFTTFLDNAQHELRKPAKYISITKLQSQLDLALRQPGTITATDPHKEYVTVEVNQTSLIDWLMHIVSISGLEEGTSSQGNEVWNESITKQADVGNETRNFESEHNRSTQGTSKVGSDKDINGFETMQLCYKVPFPLSLILSRKAIIRYQLLFRYFLLLRHVEMQLENSWVQHSKNS 616
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP3_XENLA (Gamma-tubulin complex component 3 homolog OS=Xenopus laevis GN=tubgcp3 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.267e-16 Identity = 55/182 (30.22%), Postives = 92/182 (50.55%), Query Frame = 3 Query: 201 VKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQVHQGSSCLLR 746 + AY S LL+++ + Y+L+ +++++RYLLL QGDF+ H MD+ + EL++ + L +L+ A+R+T A D +LKR+ D LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L W+ H ++ LL+ Sbjct: 533 IDAAYFDTSKYLLDVLNKNYNLLEHMQAMRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFD-----------NPEILKRL------------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIWKGHMCNAKLLK 691
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: SPC98_DICDI (Spindle pole body component 98 OS=Dictyostelium discoideum GN=spc98 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15 Identity = 52/197 (26.40%), Postives = 95/197 (48.22%), Query Frame = 3 Query: 150 ENSKLLSFGSNHHYLECVKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQVHQGSSCL 740 E +K L++ + E +++ +S LL ++ R+ M ++++K+YLLL QGDF+ + MD+ E+L+K +I KL +D A+R++ A E ++ R+ D L + G + FSL Y V PL+ ++S + +Y+ +F ++ K VE L W+ + S+ L Sbjct: 459 EKTKELNYINKEVLQEIIELVSRQSSERLLKIVLNRFKFMNHVKALKKYLLLGQGDFIQYLMDLIGEDLLKPTSQIQRHKLVGWMDTAIRNSNA-----------QFEEQDIVNRL------------DIALLPERPGNIGWDIFSLDYHVDTPLNTILSPNDILRYKKIFHFMWGIKRVEYSLASIWRKIRSSTSL 632
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP3_MOUSE (Gamma-tubulin complex component 3 OS=Mus musculus GN=Tubgcp3 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.161e-15 Identity = 55/182 (30.22%), Postives = 91/182 (50.00%), Query Frame = 3 Query: 201 VKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQVHQGSSCLLR 746 + AY S LL+++ ++Y L+ +++++RYLLL QGDF+ H MD+ + EL++ + L +L+ A+R+T A D +LKR+ D LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L + H ++ LLR Sbjct: 532 IDAAYFETSKYLLDVLNKKYSLLEHMQAMRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFD-----------SPEILKRL------------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLR 690
BLAST of EY734955 vs. ExPASy Swiss-Prot
Match: GCP3_HUMAN (Gamma-tubulin complex component 3 OS=Homo sapiens GN=TUBGCP3 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 1.051e-14 Identity = 54/182 (29.67%), Postives = 91/182 (50.00%), Query Frame = 3 Query: 201 VKVAYEFASGELLNLIKERYDLMGKLRSIKRYLLLDQGDFLVHFMDIAREELMKQLDEITVEKLQSLLDIALRSTAAAADPCHEDLTCSVERSSLLKRMATLKGVEIKTSSDSVDLEQPVSITGLETFSLSYKVQWPLSIVISRKALTKYQMVFRLLFHWKHVERPLWGAWQVHQGSSCLLR 746 + AY S LL+++ ++Y L+ +++++RYLLL QGDF+ H MD+ + EL++ + L +L+ A+R+T A D +L+R+ D LE TG + FSL Y V P++ V +R+ ++ Y VF L+ K +E L + H ++ LLR Sbjct: 534 IDAAYFETSKYLLDVLNKKYSLLDHMQAMRRYLLLGQGDFIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFD-----------SPEILRRL------------DVRLLEVSPGDTGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRMEYILTDIRKGHMCNAKLLR 692 The following BLAST results are available for this feature:
BLAST of EY734955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY734955 ID=EY734955; Name=EY734955; organism=Citrus sinensis; type=EST; length=871bpback to top |