EY734924

Overview
NameEY734924
Unique NameEY734924
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: YK01_SCHPO (Uncharacterized protein P11E10.01 OS=Schizosaccharomyces pombe GN=SPAP11E10.01 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.582e-28
Identity = 77/212 (36.32%), Postives = 115/212 (54.25%), Query Frame = 3
Query:   18 LTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVD-NEAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPD----DDEGTVFKSVGSRGWDLSSWSV 638
            LT  RTA  S LAS  L++ DS  L++IG+G +A  LI AH + RP ++ V IWN   + A  LA   SK      +     +NLE  ++  DI+S AT S+ P++ G  +  G H+DLVG +   M E D + ++   VFVD  + AL EAG+L+   + G+    ++  +L +L   K  GR       +  T+FKSVG    DL++ S+
Sbjct:  111 LTSRRTAAASALASSYLSKEDSTSLLIIGSGKVAEKLIHAHCSVRP-IRSVRIWNHRFESAKSLASRASKELPSIQIDAVPIQNLENAVKCSDIISSATLSKKPIIVGSWINPGTHIDLVGGFTPHMHEADSKCIQISNVFVDTRKGALHEAGDLLTPIKEGLFSPNEVIADLFDLCNNKHSGRSQLKNPAEAITLFKSVGDSREDLAAASL 321          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: OCD2_RHIME (Ornithine cyclodeaminase 2 OS=Rhizobium meliloti GN=ocd2 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17
Identity = 55/198 (27.78%), Postives = 99/198 (50.00%), Query Frame = 3
Query:   12 TVLTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDNEAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVG 605
            +++T  RT     ++ K LAR +++ +  IG GN A   I+A +     ++++  W+RT +  S     + +     G+      + +E ++  DI+   T  +  LV    +K G H+  +G+ +   +E D E  +  +V VD+ A   E GE      + +I ++DI G + E++ G+K GR  DDE T+F S G
Sbjct:  108 SLITGLRTGASGAVSVKALARKNARTVASIGTGNQARMQIRA-VNEIMKIEKIHAWSRTPESLSRYKTDIQREF---GIPVIVASSKKEAVEQADILITTTRGKGSLVEADWVKPGTHIVAIGTDQRGKQELDPEIFRNAKVVVDSVAQCTEKGETWHPLNKNIITKDDIHGEIGEVLLGRKPGRESDDEITIFDSTG 301          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: CRYM_MACFL (Mu-crystallin OS=Macropus fuliginosus GN=CRYM PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.902e-17
Identity = 67/198 (33.84%), Postives = 108/198 (54.55%), Query Frame = 3
Query:   15 VLTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDN-EAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVG 605
            ++T  RTA VS +A+K L    S+VL ++GAG  A    +     + S K V IWNRT K A   A+ +   GD   VC     +++E +   D++   T +  P++ G  +K GAH++ VG+ +   RE DDE +K   ++VD+ EAAL E+G++       ++   +I   L E+++G K      ++ TVFKS+G
Sbjct:  114 IITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEI-FKEQFSFKEVRIWNRTKKNAEKFAQTVK--GDVR-VC----SSVQEAVTGADVIITVTMATKPILFGEWVKPGAHINAVGASRPDWRELDDEIMKNCVLYVDSREAALKESGDV-------ILSGAEIFAELGEVVKGVKPAH--REKTTVFKSLG 294          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: CRYM_RAT (Mu-crystallin homolog OS=Rattus norvegicus GN=Crym PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.163e-16
Identity = 73/215 (33.95%), Postives = 111/215 (51.63%), Query Frame = 3
Query:   15 VLTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDN-EAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVGSRGWDL-------SSWS 635
            V+T  RTA VS +A+K L    S VL ++GAG  A    +     + S K V +WNRT + A   A   S  GD   VC     +++E +   D++   T +  P++ G  +K GAH++ VG+ +   RE DDE +K+  ++VD+ EAAL E+G++       ++   DI   L E++ G K      ++ TVFKS+G    DL        SWS
Sbjct:  113 VITAKRTAAVSAIATKFLKPPGSDVLCILGAGVQAYSHYEI-FTEQFSFKEVRMWNRTRENAEKFAS--SVQGDVR-VC----SSVQEAVTGADVIITVTMATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKQAVLYVDSREAALKESGDV-------LLSGADIFAELGEVVSGAKPAY--CEKTTVFKSLGMAVEDLVAAKLVYDSWS 310          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: CRYM_MOUSE (Mu-crystallin homolog OS=Mus musculus GN=Crym PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.518e-16
Identity = 72/215 (33.49%), Postives = 112/215 (52.09%), Query Frame = 3
Query:   15 VLTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDN-EAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVGSRGWDL-------SSWS 635
            V+T  RTA VS +A+K+L    S VL ++GAG  A    +     + S K V +WNRT + A   A  +   GD   VC     +++E +   D++   T +  P++ G  +K GAH++ VG+ +   RE DDE +++  ++VD+ EAAL E+G++       ++   DI   L E+I G K      ++ TVFKS+G    DL        SWS
Sbjct:  113 VITAKRTAAVSAIATKLLKPPGSDVLCILGAGVQAYSHYEI-FTEQFSFKEVRMWNRTRENAEKFASTVQ--GDVR-VC----SSVQEAVTGADVIITVTMATEPILFGEWVKPGAHINAVGASRPDWRELDDELMRQAVLYVDSREAALKESGDV-------LLSGADIFAELGEVISGAKPAH--CEKTTVFKSLGMAVEDLVAAKLVYDSWS 310          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: CRYM_HUMAN (Mu-crystallin homolog OS=Homo sapiens GN=CRYM PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.418e-16
Identity = 66/198 (33.33%), Postives = 106/198 (53.54%), Query Frame = 3
Query:   15 VLTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDN-EAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVG 605
            V+T  RTA VS +A+K L    S+VL ++GAG  A    +     + S K V IWNRT + A   A+ +        VC     +++E +   D++   T +  P++ G  +K GAH++ VG+ +   RE DDE +K   ++VD+ EAAL E+G++       ++   +I   L E+I+G K      ++ TVFKS+G
Sbjct:  114 VITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEI-FTEQFSFKEVRIWNRTKENAEKFADTVQ---GEVRVC----SSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDV-------LLSGAEIFAELGEVIKGVKPAH--CEKTTVFKSLG 294          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: CRYM_BOVIN (Mu-crystallin homolog OS=Bos taurus GN=CRYM PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.332e-15
Identity = 65/215 (30.23%), Postives = 110/215 (51.16%), Query Frame = 3
Query:   15 VLTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDN-EAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVGSRGWDL-------SSWS 635
            V+T  RTA VS +A+K L   +S+VL ++GAG  A    +     +   K V IWNRT + A      +        +C     +++E +   D++   T +  P++ G  +K GAH++ +G+ +   RE DDE +K+  ++VD+ EAAL E+G++       ++   +I   L E+++G K      ++ TVFKS+G    D+        SWS
Sbjct:  114 VITAKRTAAVSAIATKFLKPPNSEVLCILGAGVQAYSHYEV-FTEQFFFKEVRIWNRTKENAEKFVNTVP---GEVRIC----SSVQEAVTGADVIITVTMATEPILFGEWVKPGAHINAIGASRPDWRELDDELMKQAVLYVDSQEAALKESGDV-------LLSGAEIFAELGEVVKGVKPAH--CEKTTVFKSLGMAVEDMVAAKLVYDSWS 311          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: Y4TK_RHISN (Uncharacterized cyclodeaminase y4tK OS=Rhizobium sp. (strain NGR234) GN=NGR_a01480 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 57/198 (28.79%), Postives = 92/198 (46.46%), Query Frame = 3
Query:   18 LTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFV-DNEAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVGS 608
            LT  RTA    +A+K L++ D+ V  + GAG  A   ++A    RP +++  IW R   KA  L E L      +     ++++  + +    IV   T ++ P++    L+ G H+  +GS      E D  A+ R  V+V D+       GEL  A E G+I  +     L E+I G K GR  + + T+    G+
Sbjct:  112 LTDVRTAAAGAVAAKHLSQQDASVATIFGAGVQARLQLRALTLVRP-IRQARIWARDQLKAEALVEQLKL---EHSFAISASDDPRQAVSGAHIVVTTTPADRPILVASWLEAGQHVTAMGSDAEHKNELDPAAIARADVYVADSLTQTRRLGELHHAIEAGLIARDAAFPELGEVIAGVKTGRTRESDITIADLTGT 305          
BLAST of EY734924 vs. ExPASy Swiss-Prot
Match: OCD1_RHIME (Ornithine cyclodeaminase 1 OS=Rhizobium meliloti GN=ocd1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12
Identity = 58/197 (29.44%), Postives = 86/197 (43.65%), Query Frame = 3
Query:   18 LTLYRTACVSGLASKILARNDSKVLVMIGAGNLATHLIKAHLAARPSLKRVIIWNRTMKKASDLAEHLSKHGDHNGVCFESNENLEEILQLGDIVSCATNSEVPLVRGGRLKVGAHLDLVGSYKHTMRECDDEAVKRGRVFVDNEAALVEAGELVGAFERGVIKEEDIAGNLVELIEGKKMGRPDDDEGTVFKSVGS 608
            LT  RTA    +A++ L+R DS V  + GAG  A   ++A    RP ++   IW R   KA   A  L   G   G   ++  +    +   DI+   T SE P+++   L+ G H+  +GS      E D  A+ R     D+       GEL  A    ++  E     L ++I G K GR   DE T+    G+
Sbjct:  111 LTDVRTAAAGAVAARRLSREDSSVAAVFGAGMQARLQLEALALVRP-IREARIWARDAAKAEAAAIAL---GGKLGFAVKAETDPRAAITGADIIVTTTPSETPVLKAEWLEPGQHVTAMGSDAEHKNEIDPHAIARATYVADSLKQTRRLGELHHAIAAHLMSAEAEFPELGQVIAGLKPGRTRADEITIADLTGT 303          
The following BLAST results are available for this feature:
BLAST of EY734924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
YK01_SCHPO8.582e-2836.32Uncharacterized protein P11E10.01 OS=Schizosacchar... [more]
OCD2_RHIME8.902e-1727.78Ornithine cyclodeaminase 2 OS=Rhizobium meliloti G... [more]
CRYM_MACFL8.902e-1733.84Mu-crystallin OS=Macropus fuliginosus GN=CRYM PE=2... [more]
CRYM_RAT1.163e-1633.95Mu-crystallin homolog OS=Rattus norvegicus GN=Crym... [more]
CRYM_MOUSE1.518e-1633.49Mu-crystallin homolog OS=Mus musculus GN=Crym PE=1... [more]
CRYM_HUMAN4.418e-1633.33Mu-crystallin homolog OS=Homo sapiens GN=CRYM PE=1... [more]
CRYM_BOVIN8.332e-1530.23Mu-crystallin homolog OS=Bos taurus GN=CRYM PE=2 S... [more]
Y4TK_RHISN7.798e-1328.79Uncharacterized cyclodeaminase y4tK OS=Rhizobium s... [more]
OCD1_RHIME5.055e-1229.44Ornithine cyclodeaminase 1 OS=Rhizobium meliloti G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-108-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734924 ID=EY734924; Name=EY734924; organism=Citrus sinensis; type=EST; length=752bp
CCACGCGTCCGACTGTATTGACCCTTTATCGAACAGCTTGTGTATCTGGG
TTAGCTTCAAAGATCTTGGCCAGAAACGACAGCAAAGTGCTTGTTATGAT
TGGTGCTGGCAATTTGGCTACCCATTTGATCAAGGCACATTTGGCAGCAA
GGCCCAGTTTGAAGAGAGTGATAATTTGGAACAGGACTATGAAGAAAGCA
AGTGATTTGGCTGAGCATTTGAGCAAGCATGGGGATCATAATGGAGTGTG
TTTTGAGAGTAATGAGAACTTGGAGGAAATTCTTCAACTGGGTGATATTG
TGAGCTGTGCAACTAATTCTGAAGTGCCATTGGTGAGAGGTGGGAGATTG
AAAGTGGGAGCTCATTTAGATTTGGTTGGGTCGTATAAGCATACGATGAG
GGAATGTGATGATGAGGCTGTGAAGAGAGGTAGAGTGTTCGTTGATAATG
AGGCTGCTTTGGTGGAAGCTGGGGAATTGGTTGGTGCTTTTGAGAGAGGT
GTGATTAAGGAGGAGGATATTGCGGGGAATTTGGTCGAGTTGATTGAGGG
AAAGAAGATGGGTAGGCCAGATGATGACGAGGGTACCGTGTTCAAGTCTG
TTGGTTCCCGGGGTTGGGATCTTTCATCCTGGTCAGTTGATGGATGAAGC
TATGCGAAGGGAGGACCGCTAAGATACTTATACTTTAACCCGTAGTATCA
AACCTATGCTGGAATAAGACGGGCCTCTAATGTGGTCCCGGGAACAAAAG
CC
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