EY734857

Overview
NameEY734857
Unique NameEY734857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 9.663e-58
Identity = 75/113 (66.37%), Postives = 84/113 (74.34%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLN 518
            VKGVLT +DARIA  A A GIIVSNHG RQLDYVPATI ALEEVVKAT GRIPV LDGGV+RGTDVFK LA  AS IFIGRP  +SL + G   ++ VL M   ++ L   L+
Sbjct:  229 VKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFSLAAEGEAGVRKVLQMLRDEFELTMALS 341          

HSP 2 Score: 107.457 bits (267), Expect = 9.663e-58
Identity = 51/58 (87.93%), Postives = 55/58 (94.83%), Query Frame = 2
Query:   14 LPPFLTLKNFHGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LPP LTLKNF GLDLGKMDEANDSGLA+YVAGQIDR+LSWKDV+WLQTITKLPIL +G
Sbjct:  174 LPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDVQWLQTITKLPILVKG 231          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.052e-56
Identity = 74/113 (65.49%), Postives = 84/113 (74.34%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLN 518
            VKGVLT +DARIA  A A GIIVSNHG RQLDYVPATI ALEEVVKAT GR+PV LDGGV+RGTDVFK LA  AS IFIGRP  ++L + G   +K VL M   ++ L   L+
Sbjct:  229 VKGVLTGEDARIAIQAGAAGIIVSNHGARQLDYVPATISALEEVVKATQGRVPVFLDGGVRRGTDVFKALALGASGIFIGRPVVFALAAEGEAGVKKVLQMLRDEFELTMALS 341          

HSP 2 Score: 104.375 bits (259), Expect = 1.052e-56
Identity = 48/58 (82.76%), Postives = 54/58 (93.10%), Query Frame = 2
Query:   14 LPPFLTLKNFHGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LPP LTLKNF GLDLGKMDEANDSGLA+YVAGQIDR+LSWKD++WLQTIT +PIL +G
Sbjct:  174 LPPNLTLKNFEGLDLGKMDEANDSGLASYVAGQIDRTLSWKDIQWLQTITNMPILVKG 231          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.330e-56
Identity = 71/113 (62.83%), Postives = 83/113 (73.45%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLN 518
            VKGV+T +DAR+A    A GIIVSNHG RQLDYVPATIMALEEVVKA  GRIPV LDGGV+RGTDVFK LA  A+ +FIGRP  +SL + G   +K VL M   ++ L   L+
Sbjct:  229 VKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAEGEAGVKKVLQMMRDEFELTMALS 341          

HSP 2 Score: 105.916 bits (263), Expect = 2.330e-56
Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 2
Query:   14 LPPFLTLKNFHGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LPPFLTLKNF G+DLGKMD+ANDSGL++YVAGQIDRSLSWKDV WLQTIT LPIL +G
Sbjct:  174 LPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILVKG 231          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.701e-33
Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 3
Query:  183 KGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLN 518
            KG+L   DAR A      GI+VSNHG RQLD VPATI  L E+V+A  G++ V LDGGV++GTDV K LA  A  +F+GRP  + L   G   ++ VL +   ++ L   L+
Sbjct:  236 KGILRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIVWGLAFQGEKGVQDVLEILKEEFRLAMALS 347          

HSP 2 Score: 65.0846 bits (157), Expect = 8.701e-33
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 2
Query:   14 LPPFLTLKNFHGLDLGKMDEAN---DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LPP L +KNF    L    E N   DSGLAAYVA  ID S+SW+D+KWL+ +T LPI+++G
Sbjct:  177 LPPQLRMKNFETSTLSFSPEENFGDDSGLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKG 237          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.953e-31
Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLN 518
            VKG+L   DA+ A      GI+VSNHG RQLD VPATI  L E+V+A  G++ V LDGGV++GTDV K LA  A  +F+GRP  + L   G   ++ VL +   ++ L   L+
Sbjct:  235 VKGILRGDDAKEAVKHGVDGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPIIWGLAFQGEKGVQDVLEILKEEFRLAMALS 347          

HSP 2 Score: 58.9214 bits (141), Expect = 5.953e-31
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 2
Query:   14 LPPFLTLKNFHGLDLGKMDEAN---DSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LPP L +KNF   DL    + N   +SGLA YVA  ID SLSW D+ WL+ +T LPI+ +G
Sbjct:  177 LPPQLRMKNFETNDLAFSPKGNFGDNSGLAEYVAQAIDPSLSWDDITWLRRLTSLPIVVKG 237          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.313e-30
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHL 503
            VKG++ P+DA +A    A GIIVSNHG RQLD  P+TI  L  + K   GR+P++LDGG++RGTDV K LA  A+ + IGRP  + L++ G   +  VL++ N +  L
Sbjct:  254 VKGIMCPKDAELALQYGADGIIVSNHGGRQLDTCPSTIEVLPYISKVVRGRVPLILDGGIRRGTDVLKALAFGANAVCIGRPIIWGLSTGGKDGVLKVLNLLNSELQL 361          

HSP 2 Score: 55.8398 bits (133), Expect = 1.313e-30
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 2
Query:   14 LPPFLTLKNFHGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILSEG 187
            LP  L+LK F  L L  +D     GL  Y+A  ID SL+W D+KWL++ITKLPIL +G
Sbjct:  203 LPNGLSLKIFEKLMLSNLD----GGLNQYIATMIDPSLTWNDLKWLKSITKLPILVKG 256          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 7.520e-24
Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYH 500
            +KG+LT +DA +A      GIIVSNHG RQLD V A+I AL EVV A  G+I V LDGGV+ G DV K LA  A  IF+GRP  + L   G   +K VL++   ++H
Sbjct:  221 LKGILTKEDAELAVKHNVQGIIVSNHGGRQLDEVLASIDALTEVVAAVKGKIEVYLDGGVRTGNDVLKALALGAKCIFLGRPILWGLACKGEHGVKEVLNILTNEFH 327          

HSP 2 Score: 34.6538 bits (78), Expect = 7.520e-24
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:  113 IDRSLSWKDVKWLQTITKLPILSEG 187
            I  SL W D+ W Q+IT+LPI+ +G
Sbjct:  199 ISTSLCWNDLSWFQSITRLPIILKG 223          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.772e-22
Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLNMPSMIQPKTAISPNLV 566
            +KG+LT +DA +A      GI+VSNHG RQLD V A+I AL EVV A  G+I V +DGGV+ GTDV K LA  A  IF+GRP  + L   G   +K VL +   + H    L   S  Q    ISP+L+
Sbjct:  223 LKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLGRPILWGLACKGEDGVKEVLDILTAELHRCMTL---SGCQSVAEISPDLI 348          

HSP 2 Score: 28.4906 bits (62), Expect = 1.772e-22
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  122 SLSWKDVKWLQTITKLPILSEG 187
            S  W D+  LQ+IT+LPI+ +G
Sbjct:  204 SFCWNDLSLLQSITRLPIILKG 225          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.076e-22
Identity = 60/129 (46.51%), Postives = 77/129 (59.69%), Query Frame = 3
Query:  180 VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYHLPTDLNMPSMIQPKTAISPNLV 566
            +KG+LT +DA +A      GIIVSNHG RQLD VPA+I AL EVV A +G+I V +DGGV+ G DV K LA  A  IF+GRP  + L   G   +K VL +   + H    L   S  +    ISP+L+
Sbjct:  223 LKGILTKEDAELAVKHNIRGIIVSNHGGRQLDEVPASIDALREVVAAVNGKIEVYMDGGVRTGNDVLKALALGARCIFLGRPIIWGLACKGEDGVKEVLDILKEELHTCMAL---SGCRSVAEISPDLI 348          

HSP 2 Score: 26.1794 bits (56), Expect = 5.076e-22
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 2
Query:  122 SLSWKDVKWLQTITKLPILSEG 187
            S  W D+  LQ++T+LPI+ +G
Sbjct:  204 SSCWNDLPLLQSMTRLPIILKG 225          
BLAST of EY734857 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.526e-20
Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  144 SGFKQSPNCQF*VKGVLTPQDARIA*SAEATGIIVSNHGPRQLDYVPATIMALEEVVKATHGRIPVLLDGGVKRGTDVFKTLAPEASDIFIGRPAAYSLTSAGHICLKTVLHMHNRKYH 500
            S F+        +KG+LT +DA +A      GIIVSNHG RQLD VPA+I AL EVV A  G++ V LDGG++ G DV K LA  A  +F+GRP  + L   G   +K VL +   ++H
Sbjct:  211 SWFQSMTRLPIILKGILTKEDAELAVKHNVHGIIVSNHGGRQLDEVPASIDALTEVVAAVKGKVEVYLDGGIRTGNDVLKALALGAKCVFVGRPILWGLAYKGEHGVKEVLDILKNEFH 329          
The following BLAST results are available for this feature:
BLAST of EY734857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 125
Match NameE-valueIdentityDescription
GOX2_ARATH9.663e-5866.37Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH1.052e-5665.49Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
GOX_SPIOL2.330e-5662.83Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
HAOX1_HUMAN8.701e-3346.43Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE5.953e-3146.02Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX_DICDI1.313e-3047.22Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_HUMAN7.520e-2450.47Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]
HAOX2_RAT1.772e-2246.51Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_MOUSE5.076e-2246.51Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
HAOX2_BOVIN1.526e-2045.38Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-103-H12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734857 ID=EY734857; Name=EY734857; organism=Citrus sinensis; type=EST; length=820bp
CCACGCGTCCGCTCTACCACCATTTTTGACATTAAAGAATTTTCATGGTT
TGGACCTTGGCAAGATGGACGAGGCAAATGACTCTGGGCTTGCTGCCTAT
GTTGCTGGTCAAATTGATCGTTCTCTGAGCTGGAAGGACGTGAAGTGGCT
TCAAACAATCACCAAATTGCCAATTCTGAGTGAAGGGTGTACTCACACCA
CAGGATGCGCGGATTGCATGATCGGCTGAAGCAACTGGCATTATTGTATC
CAATCATGGACCTCGTCAACTTGACTATGTCCCTGCCACTATCATGGCCC
TGGAAGAGGTTGTGAAAGCTACTCATGGGCGTATTCCTGTGCTCTTGGAT
GGTGGTGTTAAGCGAGGAACTGATGTCTTCAAAACATTGGCACCTGAAGC
CTCTGATATATTTATTGGACGACCAGCGGCGTACTCATTGACATCTGCCG
GACACATATGCCTAAAAACAGTACTCCACATGCATAACAGAAAATACCAT
CTACCCACGGATCTAAATATGCCATCAATGATCCAACCTAAAACTGCCAT
ATCACCTAACCTTGTGTACGCGCCACCATCTCCTCTCCACCCCCTGTCTT
CACACTGCAGGATACCGACATCTACCAAACCACTCAATCTCAACAATTCC
ATTAACCCACTCTGTACTAACATATACCGTGCAAGGCATCAAACATCCAT
TACATATGCACGCACCTATATGCCACCCTCCCCCCACCTACTCCACACAT
CTACCTACCTCCCGGCCAACATACCAGATACCGCAACCAACGCTATATTG
CCGCTCATACCAGCCACTCA
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