EY734706

Overview
NameEY734706
Unique NameEY734706
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length438
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR_PEA (Pyrroline-5-carboxylate reductase OS=Pisum sativum GN=PROC PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.218e-23
Identity = 53/59 (89.83%), Postives = 54/59 (91.53%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 194
            LGAASM T SGKHPGQLKDDV SPGGTTIAG+HELEK GFRG LMNAVVAAAKRSRELS
Sbjct:  215 LGAASMATLSGKHPGQLKDDVTSPGGTTIAGVHELEKGGFRGTLMNAVVAAAKRSRELS 273          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR_SOYBN (Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.724e-22
Identity = 51/59 (86.44%), Postives = 54/59 (91.53%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 194
            LGAASMV+++GKHPGQLKDDV SPGGTTI GIHELE  GFRG LMNAVVAAAKRSRELS
Sbjct:  216 LGAASMVSQTGKHPGQLKDDVTSPGGTTITGIHELENGGFRGTLMNAVVAAAKRSRELS 274          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR1_ARATH (Pyrroline-5-carboxylate reductase OS=Arabidopsis thaliana GN=PROC1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.934e-21
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSRELS 194
            LGAA+MV+K+GKHPG LKDDV SPGGTTIAG+HELEK  FR  LMNAVVAAAKRSRELS
Sbjct:  216 LGAATMVSKTGKHPGVLKDDVTSPGGTTIAGVHELEKGSFRATLMNAVVAAAKRSRELS 274          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR_ACTCH (Pyrroline-5-carboxylate reductase OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.763e-21
Identity = 48/58 (82.76%), Postives = 52/58 (89.66%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAASMV + GKHPGQLKDDVAS GGTTIAGIHELEK GFRG LMNAVV+A KRS+E+
Sbjct:  218 LGAASMVARGGKHPGQLKDDVASAGGTTIAGIHELEKGGFRGTLMNAVVSATKRSQEI 275          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR_METAC (Pyrroline-5-carboxylate reductase OS=Methanosarcina acetivorans GN=proC PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.038e-13
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAA M  ++G HPG+LKD V SP GTTI GIH LE++G R   MNAV+ A++RS+EL
Sbjct:  210 LGAAKMALETGMHPGELKDMVTSPAGTTIQGIHSLEEAGIRAAFMNAVIRASERSKEL 267          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR1_PONAB (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Pongo abelii GN=PYCR1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.725e-13
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAA M+  S +HPGQLKD+V+SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  211 LGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEASCIRTREL 268          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR1_HUMAN (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Homo sapiens GN=PYCR1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.725e-13
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAA M+  S +HPGQLKD+V+SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  211 LGAAKMLLHSEQHPGQLKDNVSSPGGATIHALHVLESGGFRSLLINAVEASCIRTREL 268          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR2_BOVIN (Pyrroline-5-carboxylate reductase 2 OS=Bos taurus GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.147e-12
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAA M+  S +HPGQLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  211 LGAAKMLLDSEQHPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTREL 268          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR2_RAT (Pyrroline-5-carboxylate reductase 2 OS=Rattus norvegicus GN=Pycr2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.957e-12
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAA M+  S  HPGQLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  211 LGAAKMLLDSEDHPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTREL 268          
BLAST of EY734706 vs. ExPASy Swiss-Prot
Match: P5CR2_MOUSE (Pyrroline-5-carboxylate reductase 2 OS=Mus musculus GN=Pycr2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.957e-12
Identity = 35/58 (60.34%), Postives = 42/58 (72.41%), Query Frame = 3
Query:   18 LGAASMVTKSGKHPGQLKDDVASPGGTTIAGIHELEKSGFRGILMNAVVAAAKRSREL 191
            LGAA M+  S  HPGQLKD+V SPGG TI  +H LE  GFR +L+NAV A+  R+REL
Sbjct:  211 LGAAKMLLDSEDHPGQLKDNVCSPGGATIHALHFLESGGFRSLLINAVEASCIRTREL 268          
The following BLAST results are available for this feature:
BLAST of EY734706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
P5CR_PEA3.218e-2389.83Pyrroline-5-carboxylate reductase OS=Pisum sativum... [more]
P5CR_SOYBN2.724e-2286.44Pyrroline-5-carboxylate reductase OS=Glycine max P... [more]
P5CR1_ARATH3.934e-2183.05Pyrroline-5-carboxylate reductase OS=Arabidopsis t... [more]
P5CR_ACTCH8.763e-2182.76Pyrroline-5-carboxylate reductase OS=Actinidia chi... [more]
P5CR_METAC1.038e-1360.34Pyrroline-5-carboxylate reductase OS=Methanosarcin... [more]
P5CR1_PONAB6.725e-1360.34Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR1_HUMAN6.725e-1360.34Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR2_BOVIN1.147e-1260.34Pyrroline-5-carboxylate reductase 2 OS=Bos taurus ... [more]
P5CR2_RAT1.957e-1260.34Pyrroline-5-carboxylate reductase 2 OS=Rattus norv... [more]
P5CR2_MOUSE1.957e-1260.34Pyrroline-5-carboxylate reductase 2 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-098-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734706 ID=EY734706; Name=EY734706; organism=Citrus sinensis; type=EST; length=438bp
CGAGCTTCTCTATAGCCTTAGGAGCAGCATCAATGGTCACTAAAAGTGGG
AAGCATCCTGGACAGCTAAAAGATGATGTTGCATCGCCTGGTGGGACTAC
TATTGCCGGTATTCATGAGTTGGAGAAAAGTGGATTTCGCGGGATATTAA
TGAATGCTGTTGTTGCTGCTGCTAAGCGAAGCCGAGAACTGTCCTAGAGC
TAATTCATTTTGATTCCAGTTTCTCAGCTCTTATACATCTAGTATGGCGA
TTTAACTTTTTTTTTTTGTTTTCTGCATTTATATTGATGTAAACAGTTGC
TTGAAGCTGCATTGGTAAGTTGCTTATATGCTAATAATGTACTTCCAGGC
GTTGATGAATAGGGAAATTTTGATACTTATTAACAAAAAAAAAAAACAAC
AACAGCACCTCCCTCAAGACAACACGAACACACAAAGC
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