EY734661

Overview
NameEY734661
Unique NameEY734661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX1_MEDTR (Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.648e-50
Identity = 104/155 (67.10%), Postives = 115/155 (74.19%), Query Frame = 1
Query:  181 MISEKQADEEMVSSLNXXXXXXXXXXXXXXXXX-FGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            M+SEKQ +E M+SSLN                   G K+ LWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGM+SGII Q+FYG+MGSWTAYLIS+LYVEYRSRKEKENVSFKNHVIQWFEVL+GLLG        W +  L+F     LFGS
Sbjct:    1 MLSEKQGEETMMSSLNETIELNEEREEEKGASPGSGFKNFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMISGIIFQVFYGLMGSWTAYLISILYVEYRSRKEKENVSFKNHVIQWFEVLEGLLGPY------WKAIGLAFNCTFLLFGS 149          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX2_MEDTR (Auxin transporter-like protein 2 OS=Medicago truncatula GN=LAX2 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.994e-49
Identity = 102/156 (65.38%), Postives = 115/156 (73.72%), Query Frame = 1
Query:  181 MISEKQADEEMVSSLNXXXXXXXXXXXXXXXXX--FGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            M+ +KQ +E +VSS N                   F +K+ LWHGGSV+DAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+LQ+FYGI+GSWTAYLISVLYVEYRSRKEKENV+FKNHVIQWFEVLDGLLG        W +  L+F     LFGS
Sbjct:    1 MLPQKQGEEAIVSSFNETDQQEGVVGREEEVEDHSFSVKNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQVFYGILGSWTAYLISVLYVEYRSRKEKENVNFKNHVIQWFEVLDGLLGPY------WKALGLAFNCTFLLFGS 150          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX4_MEDTR (Auxin transporter-like protein 4 OS=Medicago truncatula GN=LAX4 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.521e-48
Identity = 99/156 (63.46%), Postives = 115/156 (73.72%), Query Frame = 1
Query:  181 MISEKQADEEMVSSLNXXXXXXXXXXXXXXXXX--FGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            M+S+ QA+E +V+++N                   F  KS LWHGGSV+DAWFSCASNQVAQVLLTLPYSFSQLGM+SGI+ QIFYG++GSWTAYLISVLYVEYR+RKEKENV+FKNHVIQWFEVLDGLLG        W +  L+F     LFGS
Sbjct:    1 MLSQNQAEEAIVTNMNETEQEGGSSLEEIAEDQSMFNFKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIVFQIFYGLIGSWTAYLISVLYVEYRARKEKENVNFKNHVIQWFEVLDGLLGRY------WKALGLAFNCTFLLFGS 150          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX1_ORYSJ (Auxin transporter-like protein 1 OS=Oryza sativa subsp. japonica GN=Os01g0856500 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.230e-47
Identity = 97/154 (62.99%), Postives = 110/154 (71.43%), Query Frame = 1
Query:  181 MISEKQADEEMVSSLNXXXXXXXXXXXXXXXXXFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            ++++    EE V  +                  F +K+LLWHGGSV+DAWFSCASNQVAQVLLTLPYSFSQLGMLSG++LQ+FYG MGSWTAYLISVLYVEYRSRKEKE VSFKNHVIQWFEVLDGLLG        W +  L+F     LFGS
Sbjct:   11 IVADSNGKEEEVGVMGVSAGEHGADDHHGGGGKFSMKNLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGVLLQLFYGFMGSWTAYLISVLYVEYRSRKEKEGVSFKNHVIQWFEVLDGLLGPY------WKAAGLAFNCTFLLFGS 158          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX2_ORYSJ (Auxin transporter-like protein 2 OS=Oryza sativa subsp. japonica GN=Os05g0447200 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 2.098e-47
Identity = 97/149 (65.10%), Postives = 109/149 (73.15%), Query Frame = 1
Query:  196 QADEEMVSSLNXXXXXXXXXXXXXXXXXFGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            QA+E +V+                    F + SLLWHGGSV+DAWFSCASNQVAQVLLTLPYSFSQLGMLSG++LQ+FYG+MGSWTAYLISVLYVEYR+RKEKE VSFKNHVIQWFEVLDGLLG        W +  L+F     LFGS
Sbjct:    7 QAEEAIVADAGKEEAEVRAAMGVEQDGKFSMTSLLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGLLLQVFYGLMGSWTAYLISVLYVEYRARKEKEGVSFKNHVIQWFEVLDGLLGPY------WKAAGLAFNCTFLLFGS 149          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: AUX1_ARATH (Auxin transporter protein 1 OS=Arabidopsis thaliana GN=AUX1 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.814e-46
Identity = 92/119 (77.31%), Postives = 100/119 (84.03%), Query Frame = 1
Query:  286 LKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            L + LWHGGSV+DAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+LQIFYG++GSWTAYLISVLYVEYR+RKEKE  SFKNHVIQWFEVLDGLLGS       W +  L+F     LFGS
Sbjct:   38 LSNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIFYGLLGSWTAYLISVLYVEYRARKEKEGKSFKNHVIQWFEVLDGLLGSY------WKALGLAFNCTFLLFGS 150          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX1_ARATH (Auxin transporter-like protein 1 OS=Arabidopsis thaliana GN=LAX1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.835e-44
Identity = 91/122 (74.59%), Postives = 99/122 (81.15%), Query Frame = 1
Query:  280 FGLKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENV-SFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            F +KS LWHGGS +DAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+LQIFYG+MGSWTAYLISVLYVEYR+R EK+   SFKNHVIQWFEVLDGLLG        W +  L+F     LFGS
Sbjct:   41 FSMKSFLWHGGSAWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILLQIFYGLMGSWTAYLISVLYVEYRARMEKQEAKSFKNHVIQWFEVLDGLLGPY------WKAAGLAFNCTFLLFGS 156          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX2_ARATH (Auxin transporter-like protein 2 OS=Arabidopsis thaliana GN=LAX2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.837e-44
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 1
Query:  286 LKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            L  + WHGGS YDAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+ Q+FYGI+GSWTAYLIS+LYVEYR+RKE+E V+F+NHVIQWFEVLDGLLG        W +  L+F     LFGS
Sbjct:   32 LSDMFWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGK------HWRNVGLAFNCTFLLFGS 144          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX3_MEDTR (Auxin transporter-like protein 3 OS=Medicago truncatula GN=LAX3 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.317e-44
Identity = 88/119 (73.95%), Postives = 95/119 (79.83%), Query Frame = 1
Query:  286 LKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            L    WHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+ QIFYG+MGSWTAY+ISVLYVEYR+RKE+E V F+NHVIQWFEVLDGLLG        W +  L F     LFGS
Sbjct:   31 LSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGK------HWRNLGLFFNCTFLLFGS 143          
BLAST of EY734661 vs. ExPASy Swiss-Prot
Match: LAX5_MEDTR (Auxin transporter-like protein 5 OS=Medicago truncatula GN=LAX5 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.077e-43
Identity = 86/119 (72.27%), Postives = 97/119 (81.51%), Query Frame = 1
Query:  286 LKSLLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIILQIFYGIMGSWTAYLISVLYVEYRSRKEKENVSFKNHVIQWFEVLDGLLGSLLESCWDWPSTALSF-----LFGS 627
            L + LWHGGS YDAWFSCASNQVAQVLLTLPYSFSQLGMLSGI+ Q+FYGI+GSWTAYLIS+LYVEYR+RKE+E V+F++HVIQWFEVLDGLLG        W +  L F     LFGS
Sbjct:   34 LSNFLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGILGSWTAYLISILYVEYRTRKEREKVNFRSHVIQWFEVLDGLLGK------HWRNVGLGFNCTFLLFGS 146          
The following BLAST results are available for this feature:
BLAST of EY734661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LAX1_MEDTR2.648e-5067.10Auxin transporter-like protein 1 OS=Medicago trunc... [more]
LAX2_MEDTR4.994e-4965.38Auxin transporter-like protein 2 OS=Medicago trunc... [more]
LAX4_MEDTR5.521e-4863.46Auxin transporter-like protein 4 OS=Medicago trunc... [more]
LAX1_ORYSJ1.230e-4762.99Auxin transporter-like protein 1 OS=Oryza sativa s... [more]
LAX2_ORYSJ2.098e-4765.10Auxin transporter-like protein 2 OS=Oryza sativa s... [more]
AUX1_ARATH8.814e-4677.31Auxin transporter protein 1 OS=Arabidopsis thalian... [more]
LAX1_ARATH2.835e-4474.59Auxin transporter-like protein 1 OS=Arabidopsis th... [more]
LAX2_ARATH4.837e-4472.27Auxin transporter-like protein 2 OS=Arabidopsis th... [more]
LAX3_MEDTR6.317e-4473.95Auxin transporter-like protein 3 OS=Medicago trunc... [more]
LAX5_MEDTR1.077e-4372.27Auxin transporter-like protein 5 OS=Medicago trunc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-105-E05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734661 ID=EY734661; Name=EY734661; organism=Citrus sinensis; type=EST; length=868bp
CCACGCGTCCGGCCAATTCTTCAATTGTGAAGCTTTAAATGATTTTGTAG
CTGTTCCGCCTTTCATGCTTTTGCATTCTTGCTCTCTTTTCCTTAGAAAG
ACAGTTTAGCAAGTAAACCAATTTGCCAGTGTTCCTACATTTGTTAATCA
CAACAAGATCTTTGAATTTGTGTGAGCAAAATGATAAGTGAGAAACAAGC
AGATGAAGAAATGGTGTCAAGCTTGAATGAGAGTGAGAGTCAAGAGAAAG
AGGAACAAATTAAGCAAGATGACTCAAAGTTTGGCCTCAAAAGCCTTCTT
TGGCATGGTGGGTCTGTTTATGATGCCTGGTTTAGCTGTGCTTCTAATCA
GGTTGCACAAGTTTTGTTGACACTTCCATACTCATTCTCTCAACTGGGAA
TGCTATCAGGCATCATATTGCAAATTTTCTATGGGATTATGGGAAGCTGG
ACTGCATATCTTATTAGTGTTTTGTATGTGGAGTATAGAAGCAGAAAAGA
GAAAGAGAATGTCAGTTTCAAGAACCATGTCATACAGTGGTTTGAAGTGC
TAGATGGACTGCTGGGGTCCTTACTGGAAAGCTGTTGGGATTGGCCTTCA
ACTGCACTTTCCTTCCTCTTTGGGTCCGGTAATCCCGCTTAATGGCTTGG
GGCAAGTCATATAATACTATATTAATGGACAATTTGGACCCAAAAACGAT
GGACCTTTTTTTTTTGGAACCTTGCGTGAGCCCCACACATGGTTTCTAAC
CCCCCTATTTTCACCATTAAACCAGTTTTGAGTTCTCTTCGTGGGCCTTT
GGTATTGACCCCTTTGAACTGGTTTGGTTATTTTACAATTTTGACAACTT
TTTTTATTCTGGCACTGT
back to top