EY734655

Overview
NameEY734655
Unique NameEY734655
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_ARATH (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Arabidopsis thaliana GN=PDH2 PE=1 SV=2)

HSP 1 Score: 306.22 bits (783), Expect = 1.573e-82
Identity = 156/220 (70.91%), Postives = 186/220 (84.55%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYAAHSSQNWVTPRLQKLS*PSKKPGYIS 694
            +F+GPNGAAAGVGAQHS CYAAWYASVPGLKVL+PYS+EDARGLLKAAIRDPDPVVFLENELLYGESFP+S E LDSSFCLPIGKA IEREGKDVTI  FSK+VG +LKAAE LA+EGISAEVINLRSI+PLDR+TI ASVRKT+R+VTVEEGFP HG+ A+ +C  ++  +  YLDAP+ +++ G +VPMPYAA + +    P+++ +   SK+  Y S
Sbjct:  146 VFRGPNGAAAGVGAQHSQCYAAWYASVPGLKVLAPYSAEDARGLLKAAIRDPDPVVFLENELLYGESFPISEEALDSSFCLPIGKAKIEREGKDVTIVTFSKMVGFALKAAEKLAEEGISAEVINLRSIRPLDRATINASVRKTSRLVTVEEGFPQHGVCAE-ICASVVEESFSYLDAPV-ERIAGADVPMPYAA-NLERLALPQIEDIVRASKRACYRS 362          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_PEA (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 300.442 bits (768), Expect = 8.634e-81
Identity = 156/223 (69.96%), Postives = 185/223 (82.96%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYAAHSSQNWVTPRLQKLS*PSKKPGYISSPI 703
            +F+G NG AAGVGAQHSHCYA+WY S PGLKVL P+S+EDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSF LPIGKA IEREGKDVTITAFSK+VG +LKAAEIL KEGISAEVINLRSI+PLDR TI ASVRKTNR+VTVEEGFP HG+GA+ +C  ++  +  YLDA + +++ G +VPMPYA  + +  V P ++ +   +K+  + S P+
Sbjct:  136 VFRGLNGDAAGVGAQHSHCYASWYGSCPGLKVLVPHSAEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFWLPIGKAKIEREGKDVTITAFSKMVGFALKAAEILEKEGISAEVINLRSIRPLDRPTINASVRKTNRLVTVEEGFPQHGVGAE-ICTSVIEESFGYLDATV-ERIGGADVPMPYAG-NLERLVVPHVEDIVRAAKRACHRSVPL 355          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_YEAST (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=PDB1 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 6.433e-60
Identity = 120/195 (61.54%), Postives = 149/195 (76.41%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYA 616
            +F+GPNGAA GVGAQHS  ++ WY S+PGLKVL PYS+EDARGLLKAAIRDP+PVVFLENELLYGESF +S E L   F LP  KA IEREG D++I  +++ V  SL+AAEIL K+ G+SAEVINLRSI+PLD   I  +V+KTN ++TVE  FPS G+GA+ +   +   A  YLDAPI +++ G +VP PYA
Sbjct:  149 VFRGPNGAAVGVGAQHSQDFSPWYGSIPGLKVLVPYSAEDARGLLKAAIRDPNPVVFLENELLYGESFEISEEALSPEFTLPY-KAKIEREGTDISIVTYTRNVQFSLEAAEILQKKYGVSAEVINLRSIRPLDTEAIIKTVKKTNHLITVESTFPSFGVGAEIVAQVMESEAFDYLDAPI-QRVTGADVPTPYA 341          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_DICDI (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Dictyostelium discoideum GN=pdhB PE=1 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 6.433e-60
Identity = 115/196 (58.67%), Postives = 153/196 (78.06%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYAAH 622
            +++GPNG    VGAQHS C+AAWY SVPGLKV++P+S+ D RGLLK+AIRD +PVV+LE+ELLY   F +S +  D  + +PIGKA +EREGKDVTI  FS+IV   ++AAEILAKEGISAEVINLR+I+P+D  TI  S++KTN++VTVEEG+   GIGA+   + ++  A  YLDAPI +++ G +VPMPYA++
Sbjct:  139 VWRGPNGPPTAVGAQHSQCFAAWYGSVPGLKVVAPWSAADHRGLLKSAIRDDNPVVYLESELLYNYKFDLSDQEQDKEYLVPIGKAKVEREGKDVTIVGFSRIVSNCMEAAEILAKEGISAEVINLRTIRPIDAETIVNSLKKTNKLVTVEEGWAQSGIGAEISAL-MMEHAFDYLDAPI-ERICGADVPMPYASN 332          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_MOUSE (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus GN=Pdhb PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.657e-57
Identity = 111/202 (54.95%), Postives = 146/202 (72.28%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYAAHSSQNWV 640
            +F+GPNGA+AGV AQHS C+AAWY   PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG +F + AE     F +PIGKA IER+G  +T+ A S+ VG  L+AA +L+KEGI  EVINLR+I+P+D   I ASV KTN +VTVE G+P  G+GA+     +   A ++LDAP   ++ G +VPMPYA     N V
Sbjct:  143 VFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVMLENELMYGVAFELPAEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPA-VRVTGADVPMPYAKVLEDNSV 343          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_BOVIN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Bos taurus GN=PDHB PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 6.657e-57
Identity = 113/202 (55.94%), Postives = 145/202 (71.78%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYAAHSSQNWV 640
            +F+GPNGA+AGV AQHS C+AAWY   PGLKV+SP+SSEDA+GL+K+AIRD +PVV LENEL+YG  F + +E     F +PIGKA IER+G  VTI A S+ VG  L+AA +L+KEGI  EVINLR+I+P+D  TI  SV KTN +VTVE G+P  G+GA+     +   A ++LDAP   ++ G +VPMPYA     N V
Sbjct:  143 VFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWSSEDAKGLIKSAIRDNNPVVVLENELMYGVPFELPSEAQSKDFLIPIGKAKIERQGTHVTIVAHSRPVGHCLEAATVLSKEGIECEVINLRTIRPMDIETIEGSVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPA-VRVTGADVPMPYAKILEDNSV 343          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_SCHPO (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=pdb1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 8.694e-57
Identity = 119/220 (54.09%), Postives = 155/220 (70.45%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEIL-AKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYAAHSSQNWVTPRLQKLS*PSKKPGYI 691
            +F+GPNG AA V AQHS  +A WY S+PGLKV+SPYS+EDARGLLKAAIRDP+PVV LENE+LYG++FP+S E L   F LP G A +ER GKD+TI   S  V  +L+AA+ L A  G+ AEVINLRSI+PLD +TI ASV+KTNR+VTV++ +  HGIG++     +   A  YLDAP+ +++   +VPMPY +H  +    P    +   +KK  YI
Sbjct:  148 VFRGPNGPAAAVAAQHSQHFAPWYGSIPGLKVVSPYSAEDARGLLKAAIRDPNPVVVLENEILYGKTFPISKEALSEDFVLPFGLAKVERPGKDITIVGESISVVTALEAADKLKADYGVEAEVINLRSIRPLDINTIAASVKKTNRIVTVDQAYSQHGIGSEIAAQIMESDAFDYLDAPV-ERVSMADVPMPY-SHPVEAASVPNADVVVAAAKKCLYI 365          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_RAT (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Rattus norvegicus GN=Pdhb PE=1 SV=2)

HSP 1 Score: 219.55 bits (558), Expect = 1.937e-56
Identity = 108/194 (55.67%), Postives = 143/194 (73.71%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYA 616
            +F+GPNGA+AGV AQHS C+AAWY   PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG +F +  E     F +PIGKA IER+G  +T+ A S+ VG  L+AA +L+KEGI  EVINLR+I+P+D   I ASV KTN +VTVE G+P  G+GA+     +   A ++LDAP   ++ G +VPMPYA
Sbjct:  143 VFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDDNPVVMLENELMYGVAFELPTEAQSKDFLIPIGKAKIERQGTHITVVAHSRPVGHCLEAAAVLSKEGIECEVINLRTIRPMDIEAIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPA-VRVTGADVPMPYA 335          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_PONAB (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii GN=PDHB PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 9.613e-56
Identity = 106/194 (54.64%), Postives = 142/194 (73.20%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYA 616
            +F+GPNGA+AGV AQHS C+AAWY   PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG  F    E     F +PIGKA IER+G  +T+ + S+ VG  L+AA +L+KEG+  EVIN+R+I+P+D  TI ASV KTN +VTVE G+P  G+GA+     +   A ++LDAP   ++ G +VPMPYA
Sbjct:  143 VFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPA-VRVTGADVPMPYA 335          
BLAST of EY734655 vs. ExPASy Swiss-Prot
Match: ODPB_HUMAN (Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens GN=PDHB PE=1 SV=3)

HSP 1 Score: 217.238 bits (552), Expect = 9.613e-56
Identity = 106/194 (54.64%), Postives = 142/194 (73.20%), Query Frame = 2
Query:   35 IFKGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKATIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIKPLDRSTIPASVRKTNRMVTVEEGFPSHGIGAQTLCIPLLRTAPHYLDAPI*KKLLGVEVPMPYA 616
            +F+GPNGA+AGV AQHS C+AAWY   PGLKV+SP++SEDA+GL+K+AIRD +PVV LENEL+YG  F    E     F +PIGKA IER+G  +T+ + S+ VG  L+AA +L+KEG+  EVIN+R+I+P+D  TI ASV KTN +VTVE G+P  G+GA+     +   A ++LDAP   ++ G +VPMPYA
Sbjct:  143 VFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPA-VRVTGADVPMPYA 335          
The following BLAST results are available for this feature:
BLAST of EY734655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
ODPB_ARATH1.573e-8270.91Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_PEA8.634e-8169.96Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_YEAST6.433e-6061.54Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_DICDI6.433e-6058.67Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_MOUSE6.657e-5754.95Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_BOVIN6.657e-5755.94Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_SCHPO8.694e-5754.09Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_RAT1.937e-5655.67Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_PONAB9.613e-5654.64Pyruvate dehydrogenase E1 component subunit beta, ... [more]
ODPB_HUMAN9.613e-5654.64Pyruvate dehydrogenase E1 component subunit beta, ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-105-D10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734655 ID=EY734655; Name=EY734655; organism=Citrus sinensis; type=EST; length=881bp
CGCCGTCCGTCTGGCCAAATATCGGCCCCTTTTCATCTTCAAAGGGCCTA
ATGGTGCTGCTGCTGGAGTGGGTGCCCAACACTCTCACTGTTATGCAGCA
TGGTATGCCTCAGTCCCTGGGTTGAAAGTACTGAGCCCATACAGTTCTGA
AGATGCTCGTGGACTGCTAAAAGCTGCTATAAGGGATCCGGATCCTGTTG
TTTTTCTTGAAAATGAGTTGTTATATGGTGAGTCATTCCCGGTATCAGCT
GAAGTTCTTGATTCCAGTTTTTGCCTTCCAATTGGGAAAGCTACAATTGA
GAGAGAAGGAAAGGATGTAACCATTACAGCTTTCTCAAAAATTGTGGGCC
TTTCACTCAAGGCGGCTGAGATACTTGCAAAGGAAGGAATAAGTGCTGAG
GTTATCAATCTGCGGTCAATTAAGCCACTAGATAGATCCACAATCCCTGC
TTCTGTCAGAAAAACTAACAGAATGGTAACAGTTGAAGAAGGGTTCCCTT
CACATGGAATTGGTGCCCAAACTCTCTGCATACCGTTATTGAGGACAGCT
CCACATTATCTTGATGCACCAATCTGAAAAAAATTGCTGGGAGTTGAAGT
CCCAATGCCATATGCAGCCCATTCTTCACAAAACTGGGTGACCCCCAGGT
TGCAAAAATTGTCCTAGCCTTCCAAGAAACCTGGTTACATATCTTCGCCA
ATAGGTTGTTGAACATATAAAAAATTCCTTCTACGCCGAAAATATTTATC
AAATATTGAACACAAAAACGGTATACACTATACTTCCTGCTTTCCCAATA
CCTTCTAAAGATGCAAATGCGCCCCATACAATCTCACGAATATTGAATTC
ACACACAATCGCTGAATAATGGTTCGCTTAT
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