EY734647

Overview
NameEY734647
Unique NameEY734647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSEF5 (3-isopropylmalate dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=leuB PE=3 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.786e-60
Identity = 115/126 (91.27%), Postives = 121/126 (96.03%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDVIVTDN+FG ILSD+ASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLT+AADAIE+AVS VLDQGLRTGDIWS GCTKVGTQEMGDA++AALRN
Sbjct:  234 PKQFDVIVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTEAADAIEQAVSRVLDQGLRTGDIWSAGCTKVGTQEMGDAVVAALRN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSEU2 (3-isopropylmalate dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=leuB PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.540e-58
Identity = 114/126 (90.48%), Postives = 119/126 (94.44%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDVIVTDNLFG ILSDQASMLTGSIGMLPSASLD  NKGMYEPCHGSAPDIAG+GIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQG+RTGDIWS+G  KVGTQEMGDA++AALRN
Sbjct:  234 PKQFDVIVTDNLFGDILSDQASMLTGSIGMLPSASLDTANKGMYEPCHGSAPDIAGKGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGIRTGDIWSEGKVKVGTQEMGDAVVAALRN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSEPF (3-isopropylmalate dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.011e-58
Identity = 113/126 (89.68%), Postives = 121/126 (96.03%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDVIVTDN+FG ILSD+ASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAG+GIANPLATILSVSMMLRYSFNL +AADAIEKAVS+VLDQGLRTGDI+S GCTKVGTQEMGDA++AALRN
Sbjct:  234 PKQFDVIVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGKGIANPLATILSVSMMLRYSFNLHEAADAIEKAVSVVLDQGLRTGDIFSTGCTKVGTQEMGDAVVAALRN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSE14 (3-isopropylmalate dehydrogenase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=leuB PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.430e-58
Identity = 113/126 (89.68%), Postives = 119/126 (94.44%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDVIVTDNLFG ILSDQASMLTGSIGMLPSASLD  NKGMYEPCHGSAPDIAG+GIANPLATILSVSMMLRYSFNLTDAADAIEKAVS+VLDQG+RTGDIWS+G  KVGTQEMGDA++AALRN
Sbjct:  234 PKQFDVIVTDNLFGDILSDQASMLTGSIGMLPSASLDTANKGMYEPCHGSAPDIAGKGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSVVLDQGIRTGDIWSEGKVKVGTQEMGDAVVAALRN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSESM (3-isopropylmalate dehydrogenase OS=Pseudomonas syringae pv. tomato GN=leuB PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.792e-57
Identity = 112/126 (88.89%), Postives = 118/126 (93.65%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDVIVTDNLFG ILSDQASMLTGSIGMLPSASLD  NKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLT AADAIE+AVSLVLDQG+RTGDIWS+G  KVGT+EMGDA++AALRN
Sbjct:  234 PKQFDVIVTDNLFGDILSDQASMLTGSIGMLPSASLDTANKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTAAADAIEQAVSLVLDQGIRTGDIWSEGKVKVGTKEMGDAVVAALRN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSEAE (3-isopropylmalate dehydrogenase OS=Pseudomonas aeruginosa GN=leuB PE=3 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 2.458e-56
Identity = 108/126 (85.71%), Postives = 118/126 (93.65%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDV+VTDN+FG ILSD+ASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSF+   AADAIE+AVS VLDQGLRTGDIWS+GC KVGT+EMGDA++AAL+N
Sbjct:  234 PKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQGLRTGDIWSEGCRKVGTREMGDAVVAALKN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_PSEPK (3-isopropylmalate dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=leuB PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 7.152e-56
Identity = 109/126 (86.51%), Postives = 119/126 (94.44%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAALRN 402
            P  FDV+VTDN+FG ILSD+ASMLTGSIGMLPSASLDA+NKGMYEPCHGSAPDIAG GIANPLATILSVSMMLRYSFN + AA+AIEKAVSLVLDQGLRTGDI+S+GC KVGTQEMGDA++AALRN
Sbjct:  234 PKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDADNKGMYEPCHGSAPDIAGLGIANPLATILSVSMMLRYSFNQSAAAEAIEKAVSLVLDQGLRTGDIFSEGCRKVGTQEMGDAVVAALRN 359          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_XANOR (3-isopropylmalate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=leuB PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.813e-52
Identity = 103/124 (83.06%), Postives = 112/124 (90.32%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAAL 396
            P  FDVIVTDN+FG ILSDQASMLTGSIGMLPSASLDAN+KGMYEPCHGSAPDIAG+GIANPLATILSV+MMLRY+F   DAADAIE+AV  VLDQGLRT DIWS+G TKVGT  MGDA++AAL
Sbjct:  234 PKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGKGIANPLATILSVAMMLRYTFAQADAADAIERAVGKVLDQGLRTADIWSEGTTKVGTVAMGDAVVAAL 357          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_XANOM (3-isopropylmalate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=leuB PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.813e-52
Identity = 103/124 (83.06%), Postives = 112/124 (90.32%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAAL 396
            P  FDVIVTDN+FG ILSDQASMLTGSIGMLPSASLDAN+KGMYEPCHGSAPDIAG+GIANPLATILSV+MMLRY+F   DAADAIE+AV  VLDQGLRT DIWS+G TKVGT  MGDA++AAL
Sbjct:  234 PKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGKGIANPLATILSVAMMLRYTFAQADAADAIERAVGKVLDQGLRTADIWSEGTTKVGTVAMGDAVVAAL 357          
BLAST of EY734647 vs. ExPASy Swiss-Prot
Match: LEU3_XANC5 (3-isopropylmalate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=leuB PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.813e-52
Identity = 103/124 (83.06%), Postives = 112/124 (90.32%), Query Frame = 1
Query:   25 PL*FDVIVTDNLFGHILSDQASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFNLTDAADAIEKAVSLVLDQGLRTGDIWSQGCTKVGTQEMGDAIIAAL 396
            P  FDVIVTDN+FG ILSDQASMLTGSIGMLPSASLDAN+KGMYEPCHGSAPDIAG+GIANPLATILSV+MMLRY+F   DAADAIE+AV  VLDQGLRT DIWS+G TKVGT  MGDA++AAL
Sbjct:  234 PKQFDVIVTDNMFGDILSDQASMLTGSIGMLPSASLDANSKGMYEPCHGSAPDIAGKGIANPLATILSVAMMLRYTFAQADAADAIERAVGKVLDQGLRTADIWSEGTTKVGTVAMGDAVVAAL 357          
The following BLAST results are available for this feature:
BLAST of EY734647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 335
Match NameE-valueIdentityDescription
LEU3_PSEF54.786e-6091.273-isopropylmalate dehydrogenase OS=Pseudomonas flu... [more]
LEU3_PSEU21.540e-5890.483-isopropylmalate dehydrogenase OS=Pseudomonas syr... [more]
LEU3_PSEPF2.011e-5889.683-isopropylmalate dehydrogenase OS=Pseudomonas flu... [more]
LEU3_PSE143.430e-5889.683-isopropylmalate dehydrogenase OS=Pseudomonas syr... [more]
LEU3_PSESM3.792e-5788.893-isopropylmalate dehydrogenase OS=Pseudomonas syr... [more]
LEU3_PSEAE2.458e-5685.713-isopropylmalate dehydrogenase OS=Pseudomonas aer... [more]
LEU3_PSEPK7.152e-5686.513-isopropylmalate dehydrogenase OS=Pseudomonas put... [more]
LEU3_XANOR2.813e-5283.063-isopropylmalate dehydrogenase OS=Xanthomonas ory... [more]
LEU3_XANOM2.813e-5283.063-isopropylmalate dehydrogenase OS=Xanthomonas ory... [more]
LEU3_XANC52.813e-5283.063-isopropylmalate dehydrogenase OS=Xanthomonas cam... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-105-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734647 ID=EY734647; Name=EY734647; organism=Citrus sinensis; type=EST; length=864bp
CGCCGCCATGCAACTGGTGCGTGCCCCCTTTAATTCGACGTGATCGTCAC
CGACAACCTGTTTGGCCACATCCTGTCCGACCAGGCCTCGATGCTCACCG
GTTCCATCGGCATGCTGCCGTCGGCGTCCCTGGATGCCAACAACAAGGGC
ATGTACGAGCCGTGCCACGGTTCTGCGCCGGACATCGCAGGGCAGGGCAT
TGCCAACCCGTTGGCGACCATTTTGTCGGTGTCGATGATGCTGCGTTACA
GCTTCAACCTGACCGACGCGGCGGATGCCATCGAAAAGGCTGTGAGCCTG
GTGCTGGACCAAGGCCTGCGCACCGGCGACATCTGGTCCCAGGGTTGCAC
CAAGGTCGGTACGCAAGAAATGGGCGACGCCATAATCGCCGCGCTGCGGA
ATCCTGTAATCTCTCGGGCCCACTTGCAGATGTTGCTGCAAGGCGGCCCA
ACTTTTGAACACAGTGAAAATGCCATGAAACGTGTACGTCTGTTCTGCTG
CCGCGGTATGGACGGTTCCCCTGCTCATGCCGCGGGATGCTGGAAAACCA
CGGTTTTCATCCTATTTGACCCGGTGTTTTTCTCTCCCTCCAGTGAAAGG
TGGTCCATCGCCCCTTCGTTGGGGCACACGACCTTTCCCCACATCATCGC
CCCCTTAACCACTTTGACCAAATTACCACCTCTCACCCCCTTTCCACTCC
GATCTCTCACACTCACAACACATCAATTATCCATTCCCATAATTCCAAAT
AAAGCAGAATATCAATCTCAATCCACAATATCAGCCCCTTCTACGACACT
CAACACTGCTACCAATGACATACCCGAATCCTACCACTCTACCCCAACCC
ATACGCAATCTCCC
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