EY734639

Overview
NameEY734639
Unique NameEY734639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM11_CUCSA (Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumis sativus GN=HEMA1 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.145e-48
Identity = 113/205 (55.12%), Postives = 140/205 (68.29%), Query Frame = 2
Query:   23 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLENCSYY*EN*KTNAEKIRGGTILLLAFQKRGDVIPART 637
            HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERV AI EE+  VEIIYKPL++MLSC A+A V FT+TASE+ LF K+ V+DLPPV    +G   LF D + P  +G  C+ ++    +++ ++L E + AN++DRL K M+   II EES QF AWR  LE      +  +  AE+IR    L     K GD IP +T
Sbjct:  283 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVTAIREEMKDVEIIYKPLTEMLSCTAEADVIFTSTASESLLFTKEQVKDLPPV-GHDVGGLRLFIDISVPRNVG-ACINNLEDVRVYNVDDLKEVVAANKEDRLRKAMEAQSIITEESKQFEAWRDSLETVPTI-KKLRAYAERIRTAE-LEKCLSKMGDDIPKKT 483          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM11_ARATH (Glutamyl-tRNA reductase 1, chloroplastic OS=Arabidopsis thaliana GN=HEMA1 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.907e-45
Identity = 106/206 (51.46%), Postives = 141/206 (68.45%), Query Frame = 2
Query:   23 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLENCSYY*EN*KTNAEKIRGGTILLLAFQKRGDVIPARTT 640
            + +ARM VIGAGKMGKLVIKHL+AKGCTK+VVVNRSEERV+AI EE+ G+EIIY+PL +ML+CA++A V FT+TASE PLFLK+HV++LP      +G    F D + P  +G +CV +V  A +++ ++L E + AN++DR+ K M+   II EES QF AWR  LE      +  +  AE+IR    L     K GD I  +TT
Sbjct:  276 NVSARMCVIGAGKMGKLVIKHLMAKGCTKVVVVNRSEERVSAIREEMPGIEIIYRPLDEMLACASEADVVFTSTASETPLFLKEHVENLPQASP-EVGGLRHFVDISVPRNVG-SCVGEVETARVYNVDDLKEVVAANKEDRMRKAMEAQTIITEESTQFEAWRDSLETVPTI-KKLRAYAERIRVAE-LEKCMSKMGDDINKKTT 477          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM12_ARATH (Glutamyl-tRNA reductase 2, chloroplastic OS=Arabidopsis thaliana GN=HEMA2 PE=2 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 1.367e-43
Identity = 102/193 (52.85%), Postives = 131/193 (67.88%), Query Frame = 2
Query:   26 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEEL-NGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLENCSYY*EN*KTNAEKIRGGTILLLA 601
            ++ARMLV+GAGKMGKLVIKHLVAKGCTKMVVVNRSEE+VAA+  E+  GVEIIYKPL +MLSCAA+A V FT+TASE PLFLK+ V+ LPPV         LF D + P  +G +CVA++    + + ++L E + AN++DR+ K M    II +ES  F AWR  LE             +K+RG T  ++A
Sbjct:  269 SSARMLVVGAGKMGKLVIKHLVAKGCTKMVVVNRSEEKVAAVRNEMPPGVEIIYKPLDEMLSCAAEADVVFTSTASETPLFLKEQVETLPPVRDA-----RLFVDISVPRNVG-SCVAEIDGTRVFNVDDLKEVVAANKEDRVRKAMDAQAIITDESKHFEAWRDSLETV--------PTIKKLRGYTERIIA 447          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM13_HORVU (Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeum vulgare GN=HEMA3 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 2.415e-40
Identity = 87/166 (52.41%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   29 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLE 526
            +ARML+IGAGKMG+LV KHL AKGC K+V+VNRS ERV AI EE+ G+EI+Y+ L++M   AADA V FT+T+SE+PLF K+H + LPPV    LG   LF D + P  + + CV+DV  A +++ ++L E + AN++DRL K M+   II EE  +F AWR  +E
Sbjct:  265 SARMLLIGAGKMGRLVAKHLAAKGCKKVVIVNRSVERVDAIREEMQGIEIVYRSLTEMYEAAADADVVFTSTSSESPLFTKEHAEALPPVSGA-LGGVRLFVDISVPRNV-SACVSDVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIISEELKRFEAWRDSME 428          

HSP 2 Score: 21.9422 bits (45), Expect = 2.415e-40
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  516 DSLKTVPTTKKI 551
            DS++TVPT KK+
Sbjct:  425 DSMETVPTIKKL 436          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM11_HORVU (Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeum vulgare GN=HEMA1 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 6.961e-40
Identity = 86/166 (51.81%), Postives = 119/166 (71.69%), Query Frame = 2
Query:   29 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLE 526
            +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AI EE+  +EI+Y+PL++M   AADA V FT+TASE+ LF K+H + LPP+     GV  LF D + P  +G  C+++V  A +++ ++L E + AN++DR+ K M+   II +E  +F AWR  LE
Sbjct:  259 SARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAADADVVFTSTASESLLFTKEHAEVLPPISLAMGGV-RLFVDISVPRNVG-ACLSEVEHARVYNVDDLKEVVEANKEDRVRKAMEAQTIITQELKRFEAWRDSLE 422          

HSP 2 Score: 22.7126 bits (47), Expect = 6.961e-40
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  516 DSLKTVPTTKKI 551
            DSL+TVPT KK+
Sbjct:  419 DSLETVPTIKKL 430          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSJ (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os10g0502400 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.067e-40
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   29 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLE 526
            +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AI EE+  +EI+Y+PL++M   AA+A V FT+TASE PLF K+H + LP +     GV  LF D + P  + + CV++V  A +++ ++L E + AN++DRL K M+   II +E  +F AWR  LE
Sbjct:  269 SARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAAEADVVFTSTASETPLFTKEHAEALPAISDAMGGV-RLFVDISVPRNV-SACVSEVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIITQELKRFEAWRDSLE 432          

HSP 2 Score: 22.7126 bits (47), Expect = 9.067e-40
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  516 DSLKTVPTTKKI 551
            DSL+TVPT KK+
Sbjct:  429 DSLETVPTIKKL 440          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM1_ORYSI (Glutamyl-tRNA reductase, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_033071 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 9.067e-40
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   29 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLE 526
            +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AI EE+  +EI+Y+PL++M   AA+A V FT+TASE PLF K+H + LP +     GV  LF D + P  + + CV++V  A +++ ++L E + AN++DRL K M+   II +E  +F AWR  LE
Sbjct:  269 SARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAAEADVVFTSTASETPLFTKEHAEALPAISDAMGGV-RLFVDISVPRNV-SACVSEVGHARVYNVDDLKEVVEANKEDRLRKAMEAQTIITQELKRFEAWRDSLE 432          

HSP 2 Score: 22.7126 bits (47), Expect = 9.067e-40
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  516 DSLKTVPTTKKI 551
            DSL+TVPT KK+
Sbjct:  429 DSLETVPTIKKL 440          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM12_HORVU (Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vulgare GN=HEMA2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.183e-39
Identity = 86/166 (51.81%), Postives = 118/166 (71.08%), Query Frame = 2
Query:   29 TARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLE 526
            +ARML+IGAGKMGKLV+KHL+AKGC K+VVVNRS ERV AI EE+  +EI+Y+PL++M   AADA V FT+TASE+ LF K+H + LPP+     GV  LF D + P  +G  C++ V  A +++ ++L E + AN++DR+ K M+   II +E  +F AWR  LE
Sbjct:  197 SARMLLIGAGKMGKLVVKHLIAKGCKKVVVVNRSVERVDAIREEMKDIEIVYRPLTEMYEAAADADVVFTSTASESLLFTKEHAEALPPISLAMGGV-RLFVDISVPRNVG-ACLSQVEHARVYNVDDLKEVVEANKEDRVRKAMEAQAIITQELKRFEAWRDSLE 360          

HSP 2 Score: 22.7126 bits (47), Expect = 1.183e-39
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 3
Query:  516 DSLKTVPTTKKI 551
            DSL+TVPT KK+
Sbjct:  357 DSLETVPTIKKL 368          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM12_CUCSA (Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumis sativus GN=HEMA2 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.579e-38
Identity = 97/207 (46.86%), Postives = 132/207 (63.77%), Query Frame = 2
Query:   23 HATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*T---LFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLENCSYY*EN*KTNAEKIRGGTILLLAFQKRGDVIPAR 634
            +ATA+++V+GAGKMGKLVIKHLVAKGC KMVVVNR+++ V A+ EEL  VEIIYKPLS++L+CA++A V FT TAS+ PLF K+HV  LPP      G  T   LF D + P  +    V+D+   S+ + ++L E + AN++DRL K+ +   II EE  +F AWR  LE      +  +   E+IR    L     K G+ IP +
Sbjct:  275 YATAKVMVVGAGKMGKLVIKHLVAKGCRKMVVVNRTQDSVDAV-EELKDVEIIYKPLSKILACASEADVIFTCTASKTPLFTKEHVAMLPPA-----GTETGRRLFVDISVPRNVEQR-VSDLETVSVFNVDDLKEVVAANKEDRLKKVQEAQSIIGEEINKFEAWRDSLETVPTI-KKFRAYVERIRAAE-LDKCLSKMGEDIPKK 472          
BLAST of EY734639 vs. ExPASy Swiss-Prot
Match: HEM1_CYAA5 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ATCC 51142) GN=hemA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.686e-15
Identity = 48/167 (28.74%), Postives = 85/167 (50.90%), Query Frame = 2
Query:   26 ATARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRSEERVAAICEELNGVEIIYKPLSQMLSCAADAHVDFTTTASEAPLFLKDHVQDLPPVEAC*LGV*TLFTDSAAPLKMGTTCVADVAIASLHSGEELMEEMCANRDDRLPKIMQTPDIIPEES*QFAAWRGFLE 526
            AT  + +IGAGKM  L++KHLVAKG T + +VNRS+ R   + ++    E+    L +M+S    +H+ FT+T +  P+  +D+++++   E        +  D + P  + T  V D+ I   ++ ++L   +  N   R    ++   ++ EE   F  W   LE
Sbjct:  181 ATRNISIIGAGKMACLLVKHLVAKGATSITIVNRSQRRAEELAKKFPQAELTLVSLDEMMSVVGKSHLVFTSTGATEPILHQDNLREVVSAEQG-----LMLFDISVPRNVATN-VQDLEIVEAYNVDDLKAVVAQNHASRRQMALEAEGLLEEEVEAFELWWRSLE 341          
The following BLAST results are available for this feature:
BLAST of EY734639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
HEM11_CUCSA9.145e-4855.12Glutamyl-tRNA reductase 1, chloroplastic OS=Cucumi... [more]
HEM11_ARATH1.907e-4551.46Glutamyl-tRNA reductase 1, chloroplastic OS=Arabid... [more]
HEM12_ARATH1.367e-4352.85Glutamyl-tRNA reductase 2, chloroplastic OS=Arabid... [more]
HEM13_HORVU2.415e-4052.41Glutamyl-tRNA reductase 3, chloroplastic OS=Hordeu... [more]
HEM11_HORVU6.961e-4051.81Glutamyl-tRNA reductase 1, chloroplastic OS=Hordeu... [more]
HEM1_ORYSJ9.067e-4051.81Glutamyl-tRNA reductase, chloroplastic OS=Oryza sa... [more]
HEM1_ORYSI9.067e-4051.81Glutamyl-tRNA reductase, chloroplastic OS=Oryza sa... [more]
HEM12_HORVU1.183e-3951.81Glutamyl-tRNA reductase 2 (Fragment) OS=Hordeum vu... [more]
HEM12_CUCSA8.579e-3846.86Glutamyl-tRNA reductase 2, chloroplastic OS=Cucumi... [more]
HEM1_CYAA52.686e-1528.74Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-105-B05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY734639 ID=EY734639; Name=EY734639; organism=Citrus sinensis; type=EST; length=854bp
CCACGCGTCCGCCTGAATCTTCCATGCCACTGCCCGGATGTTGGTTATTG
GAGCAGGCAAGATGGGGAAGCTTGTGATAAAACACTTGGTAGCCAAAGGA
TGCACTAAGATGGTGGTTGTAAACAGGTCAGAAGAGAGAGTTGCAGCCAT
CTGCGAGGAGCTCAACGGTGTTGAGATAATTTATAAACCTCTCTCACAAA
TGTTGTCCTGTGCTGCTGATGCACATGTGGACTTCACCACCACAGCATCT
GAAGCTCCATTATTCTTGAAGGATCATGTTCAGGACCTTCCTCCCGTTGA
GGCGTGCTAGTTGGGGGTGTAGACGCTCTTTACTGACAGCGCCGCTCCGC
TCAAAATGGGGACTACTTGTGTTGCAGATGTCGCTATTGCTTCGCTTCAT
TCTGGTGAGGAGCTGATGGAGGAAATGTGTGCTAATAGGGATGACAGGCT
CCCAAAAATAATGCAAACTCCAGATATTATCCCTGAGGAATCATAACAGT
TTGCAGCTTGGAGGGGATTCCTTGAAAACTGTTCCTACTACTAAGAAAAT
TGAAAAACTAATGCTGAGAAAATCAGGGGGGGCACAATTCTATTATTGGC
CTTTCAAAAAAGGGGTGACGTTATCCCAGCAAGAACAACTGGGGGGGGTG
GTCGTATGATATTATAACGACATCCTCATTAATCATCTATGTTACGGTTC
CGCTTGCCTTGCTTCCCGATGTTGTAGCGGCCGGTACCCAAGTGTCTTTC
TCAAGCAATCATTTACTCAGAGTGGTATATGTCACCCCTACATTGTTCTC
AACTTTTGCCCCCTTTACCTTGCCCCGCGCTACGTATGTGCGCGTACCGC
ACGG
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