EY733976

Overview
NameEY733976
Unique NameEY733976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY733976 vs. ExPASy Swiss-Prot
Match: GOGC6_ARATH (Golgin candidate 6 OS=Arabidopsis thaliana GN=GC6 PE=1 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 3.247e-59
Identity = 136/258 (52.71%), Postives = 168/258 (65.12%), Query Frame = 2 
Query:  104 MDLVSGYKGVVGLVFGNENSASSEDSYVERLLERISNGVLAEDRRSAMTELQAVVAESKGAQLAFGAMGFPVIMVVLKEERDDVEMVRGALETLVSALTPLDHVKGPKKEVQPALMNTDXXXXXXXXXXXXXXXXXXXDFYIRYYTXXXXXXXXXXXXXXXXEAILTIPRGITRLMDMLMDRGGIRNEALLLLTYFDS*S*GNQKIGGL*SAFEKILT**RRKEVKWKVLLGENC---LNN--EKSSSHQEYYRKLPG 862
            MDL S YKGVVG+VFG +N +S+EDSY++RLL+RISNG L +DRR+A+ ELQ+VVAES  AQLAFGA GFPVI+ +LK++RDD+EMVRGALETL+ ALTP+DH +  K EVQ ALMN+D                   DFY+RYYT                EAILT PRGITRLMDMLMDR  IRNEALLLLT+    +   QKI     AFEKI +  + +      ++ ++C   LNN    SSS+Q   R+  G
Sbjct:    1 MDLASRYKGVVGMVFG-DNQSSNEDSYIQRLLDRISNGTLPDDRRTAIVELQSVVAESNAAQLAFGAAGFPVIVGILKDQRDDLEMVRGALETLLGALTPIDHARAQKTEVQAALMNSDLLSREAENITLLLSLLEEEDFYVRYYTLQILTALLMNSQNRLQEAILTTPRGITRLMDMLMDREVIRNEALLLLTHLTREAEEIQKIVVFEGAFEKIFSIIKEEGGSDGDVVVQDCLELLNNLLRSSSSNQILLRETMG 257
The following BLAST results are available for this feature:
BLAST of EY733976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GOGC6_ARATH3.247e-5952.71Golgin candidate 6 OS=Arabidopsis thaliana GN=GC6 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-079-H05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY733976 ID=EY733976; Name=EY733976; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGCCCACGCGTCCGTAAAAAATAGATAATTATCGTGATATC
AATATTTCCGTCGAGCTTGGATCCAATTTCAGATCGGTTTCAGTATGAAG
AAGATGGATTTGGTTTCTGGTTACAAGGGGGTTGTTGGGCTTGTTTTTGG
CAATGAAAATTCTGCTTCAAGTGAAGATAGCTACGTTGAGCGCTTGCTCG
AACGTATCAGCAATGGTGTCCTAGCCGAGGACAGGAGAAGTGCTATGACT
GAGCTTCAGGCTGTTGTAGCAGAAAGTAAAGGTGCCCAGCTAGCATTTGG
AGCAATGGGCTTCCCTGTAATAATGGTTGTCTTAAAGGAAGAACGAGATG
ATGTTGAAATGGTTCGAGGGGCATTAGAAACACTTGTTAGTGCTTTGACT
CCTCTTGATCATGTTAAAGGGCCTAAGAAGGAGGTGCAGCCAGCTTTAAT
GAACACCGATTTACTTTCCCGAGAAGCCGAAAGCATTTCTCTTCTTCTAA
GTTTGTTGTCAGAGGAGGATTTCTACATAAGATATTACACTCTTCAAGTT
TTGACAAGTCTTCTCACAAATTCTCTCAATAGGTTACAGGAAGCCATTCT
GACCATTCCGCGTGGTATCACTCGGCTGATGGATATGCTCATGGATCGTG
GAGGCATACGAAATGAGGCATTACTTCTACTTACATACTTTGACTCGTGA
AGCTGAGGAAATCAAAAAATTGGTGGCCTTTGAAGTGCCTTCGAGAAAAT
TTTAACATAATAAAGAAGGAAGGAGGTCAAATGGAAGGTGTTGTTGGGCG
AGAATTGTCTGAATAATGAAAAATCTTCTTCCCACCAGGAATATTATCGA
AAACTACCGGGGAATACATATGCTTTAACCCCTTGTAAC
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