EY756536

Overview
NameEY756536
Unique NameEY756536
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11050 contig Csv1_Contig11050:689..1578. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 4.171e-93
Identity = 173/228 (75.88%), Postives = 188/228 (82.46%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGSHPGCLRAITLWS 690
            + DL+VRYR NTPLVLKGITL I GGEK+GVVGRTGSGKSTLIQV FRLVEPS                   RSRFGIIPQEPVLFEGTVRSNIDP  QYSDEEIWKSLERCQLKDVVA KP+KLDSLV D+G+NWSVGQRQLLCLGRVMLK SRLLF+DEATASVDSQTDA IQ+IIRE+FA+CTIISIAHRIPTVMD DRV+V+DAG AKEF S    L   +L++
Sbjct: 1276 LEDLKVRYRPNTPLVLKGITLDIKGGEKVGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDISTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFLDEATASVDSQTDAVIQKIIREDFASCTIISIAHRIPTVMDGDRVLVIDAGKAKEFDSPARLLERPSLFA 1503          

HSP 2 Score: 29.261 bits (64), Expect = 4.171e-93
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  674 PSLFGALVQEYANRSA 721
            PSLF ALVQEYA RSA
Sbjct: 1499 PSLFAALVQEYALRSA 1514          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 2.682e-92
Identity = 168/217 (77.42%), Postives = 186/217 (85.71%), Query Frame = 1
Query:    4 RVRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            R+ D++VRYR NTPLVLKG+T+ I GGEKIGVVGRTGSGKSTLIQV FRLVEPS                   RSRFGIIPQEPVLFEGTVRSNIDP  +YSDEEIWKSLERCQLKDVVA+KP+KLDSLVAD+G+NWSVGQRQLLCLGRVMLK SR+LF+DEATASVDSQTDA IQ+IIRE+F+ CTIISIAHRIPTVMDCDRV+V+DAG AKE+ S
Sbjct: 1298 RLEDVKVRYRPNTPLVLKGLTIDIKGGEKIGVVGRTGSGKSTLIQVLFRLVEPSGGKIIIDGIDICTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAMIQKIIREDFSDCTIISIAHRIPTVMDCDRVLVIDAGKAKEYDS 1514          

HSP 2 Score: 26.5646 bits (57), Expect = 2.682e-92
Identity = 13/15 (86.67%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  677 SLFGALVQEYANRSA 721
            SLF ALVQEYA RSA
Sbjct: 1523 SLFAALVQEYALRSA 1537          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB8C_ARATH (ABC transporter C family member 8 OS=Arabidopsis thaliana GN=ABCC8 PE=2 SV=2)

HSP 1 Score: 251.136 bits (640), Expect = 6.109e-66
Identity = 122/215 (56.74%), Postives = 159/215 (73.95%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSL-VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            +++L++RYR N PLVLKGI+ +   G ++GVVGRTGSGKSTLI   FRLVEP+                   R +  IIPQEP LF G +R+N+DP+G YSD+EIWK+LE+CQLK  ++  P+KLDS  V+D G+NWSVGQRQL CLGRV+LK +++L +DEATAS+DS TDA IQRIIREEFA CT+I++AHR+PTV+D D V+V+  G   E+
Sbjct: 1047 LQELKIRYRPNAPLVLKGISCTFREGTRVGVVGRTGSGKSTLISALFRLVEPASGCILIDGIDISKIGLKDLRMKLSIIPQEPTLFRGCIRTNLDPLGVYSDDEIWKALEKCQLKTTISNLPNKLDSSEVSDEGENWSVGQRQLFCLGRVLLKRNKILVLDEATASIDSATDAIIQRIIREEFADCTVITVAHRVPTVIDSDMVMVLSFGDLVEY 1261          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.471e-65
Identity = 121/214 (56.54%), Postives = 152/214 (71.03%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            + DLQ+RYR  +PLVLKGI+ +  GG KIG+VGRTGSGK+TLI   FRLVEP                    RSRFGIIPQ+P LF GTVR N+DP+ Q+SD EIW+ L +CQLK+VV  K + LDSLV + G NWS+GQRQL CLGR +L+ SR+L +DEATAS+D+ TD  +Q+ IR EFA CT+I++AHRIPTVMDC  V+ +  G   E+
Sbjct: 1145 ISDLQIRYRRESPLVLKGISCTFEGGHKIGIVGRTGSGKTTLISALFRLVEPVGGKIVVDGVDISKIGVHDLRSRFGIIPQDPTLFNGTVRFNLDPLCQHSDAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRSRVLVLDEATASIDNATDLILQKTIRREFADCTVITVAHRIPTVMDCTMVLSISDGRIVEY 1358          

HSP 2 Score: 21.1718 bits (43), Expect = 3.471e-65
Identity = 9/12 (75.00%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  671 EPSLFGALVQEY 706
            E SLFG LV+EY
Sbjct: 1368 ENSLFGKLVKEY 1379          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB9C_ARATH (ABC transporter C family member 9 OS=Arabidopsis thaliana GN=ABCC9 PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 6.754e-65
Identity = 122/215 (56.74%), Postives = 156/215 (72.56%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            RDLQVRY  + P VLK IT    GG+KIGVVGRTGSGKSTLIQ  FR+VEPS                   RSR GIIPQ+P LF+GT+R N+DP+ QY+D EIW+++++CQL DV+ AK ++LD+ V ++G+NWSVGQRQL+CLGRV+LK S +L +DEATASVDS TD  IQ+II +EF   T+++IAHRI TV++ D V+V+  G   EF S
Sbjct: 1242 RDLQVRYAEHFPAVLKNITCEFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSQGTIVIDNVDITKIGLHDLRSRLGIIPQDPALFDGTIRLNLDPLAQYTDHEIWEAIDKCQLGDVIRAKDERLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDS 1456          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB15C_ARATH (Putative ABC transporter C family member 15 OS=Arabidopsis thaliana GN=ABCC15 PE=5 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.505e-64
Identity = 123/215 (57.21%), Postives = 156/215 (72.56%), Query Frame = 1
Query:   10 RDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            RDLQVRY  + P VLK IT +  GG+KIGVVGRTGSGKSTLIQ  FR+VEPS                   RSR GIIPQ+  LF+GT+R N+DP+ QY+D EIW++L++CQL DV+ AK +KLD+ V ++G+NWSVGQRQL+CLGRV+LK S +L +DEATASVDS TD  IQ+II +EF   T+++IAHRI TV++ D V+V+  G   EF S
Sbjct:  789 RDLQVRYAEHFPAVLKNITCAFPGGKKIGVVGRTGSGKSTLIQALFRIVEPSHGTIVIDNVDITKIGLHDLRSRLGIIPQDNALFDGTIRLNLDPLAQYTDREIWEALDKCQLGDVIRAKDEKLDATVVENGENWSVGQRQLVCLGRVLLKKSNILVLDEATASVDSATDGVIQKIINQEFKDRTVVTIAHRIHTVIESDLVLVLSDGRIAEFDS 1003          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB3C_ARATH (ABC transporter C family member 3 OS=Arabidopsis thaliana GN=ABCC3 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.173e-63
Identity = 116/214 (54.21%), Postives = 158/214 (73.83%), Query Frame = 1
Query:    7 VRDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            +RDLQVRY  + PLVL+GIT +  GG + G+VGRTGSGKSTLIQ  FR+VEPS                   R R  IIPQ+P +FEGT+RSN+DP+ +Y+D++IW++L++CQL D V  K  KLDS V+++GDNWS+GQRQL+CLGRV+LK S++L +DEATASVD+ TD  IQ+ +RE F+ CT+I+IAHRI +V+D D V+++  G  +E+
Sbjct: 1271 IRDLQVRYAPHMPLVLRGITCTFKGGLRTGIVGRTGSGKSTLIQTLFRIVEPSAGEIRIDGVNILTIGLHDLRLRLSIIPQDPTMFEGTMRSNLDPLEEYTDDQIWEALDKCQLGDEVRKKEQKLDSSVSENGDNWSMGQRQLVCLGRVLLKRSKILVLDEATASVDTATDNLIQKTLREHFSDCTVITIAHRISSVIDSDMVLLLSNGIIEEY 1484          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.989e-62
Identity = 114/214 (53.27%), Postives = 155/214 (72.43%), Query Frame = 1
Query:   13 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            +LQVRY  + P+VL+G+T +  GG K G+VGRTG GKSTLIQ  FR+VEP+                   RSR  IIPQEP +FEGTVRSN+DP+ +Y+D++IW++L++CQL D +  K  KLDS V+++G NWSVGQRQL+CLGRV+LK S++L +DEATASVD+ TD  IQ  +R+ F+ CT+I+IAHRI +V+D D V+++D G  +E  S
Sbjct: 1245 NLQVRYGPHLPMVLRGLTCTFRGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAGEIRIDGINILTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLEEYADDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKVLILDEATASVDTATDTLIQETLRQHFSGCTVITIAHRISSVIDSDMVLLLDQGLIEEHDS 1458          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB5C_ARATH (ABC transporter C family member 5 OS=Arabidopsis thaliana GN=ABCC5 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 1.192e-61
Identity = 117/212 (55.19%), Postives = 153/212 (72.17%), Query Frame = 1
Query:   13 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 648
            D++VRY  N P VL G++    GG+KIG+VGRTGSGKSTLIQ  FRL+EP+                   RSR GIIPQ+P LFEGT+R+N+DP+ ++SD++IW++L++ QL DVV  K  KLDS V ++GDNWSVGQRQL+ LGR +LK +++L +DEATASVD+ TD  IQ+IIR EF  CT+ +IAHRIPTV+D D V+V+  G   EF
Sbjct: 1272 DVKVRYAENLPTVLHGVSCVFPGGKKIGIVGRTGSGKSTLIQALFRLIEPTAGKITIDNIDISQIGLHDLRSRLGIIPQDPTLFEGTIRANLDPLEEHSDDKIWEALDKSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQKIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEF 1483          
BLAST of EY756536 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 5.917e-61
Identity = 115/214 (53.74%), Postives = 152/214 (71.03%), Query Frame = 1
Query:   13 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGS 654
            +LQVRY  + P+VL G+T +  GG K G+VGRTG GKSTLIQ  FR+VEP+                   RSR  IIPQ+P +FEGT+RSN+DP+ +Y+D++IW++L+ CQL D V  K  KLDS V+++G NWSVGQRQL+CLGRV+LK S+LL +DEATAS+D+ TD  IQ  +R  FA CT+I+IAHRI +V+D D V+++D G  KE  S
Sbjct: 1223 NLQVRYGPHLPMVLHGLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAGEIRIDGINILSIGLHDLRSRLSIIPQDPTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMVLLLDQGLIKEHDS 1436          
The following BLAST results are available for this feature:
BLAST of EY756536 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB4C_ARATH4.171e-9375.88ABC transporter C family member 4 OS=Arabidopsis t... [more]
AB14C_ARATH2.682e-9277.42ABC transporter C family member 14 OS=Arabidopsis ... [more]
AB8C_ARATH6.109e-6656.74ABC transporter C family member 8 OS=Arabidopsis t... [more]
AB10C_ARATH3.471e-6556.54ABC transporter C family member 10 OS=Arabidopsis ... [more]
AB9C_ARATH6.754e-6556.74ABC transporter C family member 9 OS=Arabidopsis t... [more]
AB15C_ARATH1.505e-6457.21Putative ABC transporter C family member 15 OS=Ara... [more]
AB3C_ARATH2.173e-6354.21ABC transporter C family member 3 OS=Arabidopsis t... [more]
AB7C_ARATH6.989e-6253.27ABC transporter C family member 7 OS=Arabidopsis t... [more]
AB5C_ARATH1.192e-6155.19ABC transporter C family member 5 OS=Arabidopsis t... [more]
AB6C_ARATH5.917e-6153.74ABC transporter C family member 6 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-009-G04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756536 ID=EY756536; Name=EY756536; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGT
TCTCAAAGGTATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAG
TTGGGCGTACAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGG
CTGGTGGAGCCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTC
ATTGTTGGGGCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAG
AACCTGTCCTTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGT
CAGTATTCAGATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAA
AGATGTGGTAGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATA
GTGGTGACAACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGG
GTTATGCTAAAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTC
TGTTGATTCACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGAGT
TTGCTGCCTGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATG
GATTGTGATAGAGTTATAGTTGTTGATGCAGGATGGGCGAAAGAATTTGG
CAGCCATCCAGGTTGCTTGAGAGCCATCACTCTTTGGAGCATTGGTGCAG
GAGTATGCCAACCGATCGGCAGAACTGTAGGAACAATCCTTTGCACTTGA
TGNTGGGTGAAAAGAGTTTTCTGTGATGGAATGCCTATGAGTTTAGGACC
ACCTGTGACTGGCATGAAAGATCACATTCCTCGCTCAAAGGTGCAGCAAA
GAACTTCTTCTGATATGCATGGAATTTAGTAATACTCT
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