EY756441

Overview
NameEY756441
Unique NameEY756441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length531
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY756441 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.148e-15
Identity = 36/71 (50.70%), Postives = 55/71 (77.46%), Query Frame = 2 
Query:    8 SGESTKRREKMDETETKIRALREEELSHLGRIESEYKEQLSALQRDAESKEAKLMEAWCSRHVKLLKLVEQ 220
            S ++ ++REKM+E E K++ALREE+ + + +IE EY+EQL  L+RDAE+K+ KL + W SRH++L K +EQ
Sbjct:  288 SEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAEAKDQKLADQWTSRHIRLTKFLEQ 358
[Close]
BLAST of EY756441 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.300e-13
Identity = 31/67 (46.27%), Postives = 52/67 (77.61%), Query Frame = 2 
Query:   23 KRREKMDETETKIRALREEELSHLGRIESEYKEQLSALQRDAESKEAKLMEAWCSRHVKLLKLVEQI 223
            +RRE  +E E K+RALREE+ + + R+E+EY+E+++ L+RDAE+KE K+ E W ++H +L K ++Q+
Sbjct:  253 RRREATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKFLDQV 319
The following BLAST results are available for this feature:
BLAST of EY756441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AS1_ARATH7.148e-1550.70Transcription factor AS1 OS=Arabidopsis thaliana G... [more]
RS2_ORYSJ2.300e-1346.27Protein rough sheath 2 homolog OS=Oryza sativa sub... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-F06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756441 ID=EY756441; Name=EY756441; organism=Citrus sinensis; type=EST; length=531bp
CCACGCGTCCGGAGAAAGTACAAAGAGGAGGGAAAAGATGGATGAAACTG
AAACAAAGATAAGGGCTTTGAGAGAAGAGGAATTGTCTCATCTTGGGAGA
ATTGAGAGTGAGTATAAAGAGCAGCTGAGTGCTTTGCAGAGAGATGCTGA
GAGTAAAGAAGCTAAGTTAATGGAAGCATGGTGTAGCAGGCATGTTAAAC
TGCTTAAGCTTGTTGAGCAAATTGGAGTTCATCAAAGCAGCACTTCTCAT
GGATTCTGTGTCGTCCCAAAGGATATGCACTAACCGGCCATAGCTAATTA
AGGCCTGCATTTGGATTTTGCGACCGTTTTTGATAAGGCATAATGTGATA
GATAAGACTTTGATTCCTTGAACCCATGTAGCTATTGTGTTGTTTTTTTT
TTTTTCTTATATATATCCTTAAGAACTTCGATCAATAACGTTGGTAAATT
AAACTGTTCGATATTTTCTGGTTGAATAATTAATCATAGAATTTTTCATC
TTTATTCAAAAAAAAAAAAAAAAAAAAAAAA
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