EY732426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY732426 vs. ExPASy Swiss-Prot
Match: PRP8_MOUSE (Pre-mRNA-processing-splicing factor 8 OS=Mus musculus GN=Prpf8 PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54 Identity = 91/130 (70.00%), Postives = 109/130 (83.85%), Query Frame = 2 Query: 53 WDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 442 WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNYNFMGV+H +MKY ++L P+E+YHE HRP+HFL F+ L+EGE+ DRED ++ Sbjct: 2206 WDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA 2335
BLAST of EY732426 vs. ExPASy Swiss-Prot
Match: PRP8_HUMAN (Pre-mRNA-processing-splicing factor 8 OS=Homo sapiens GN=PRPF8 PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 7.861e-54 Identity = 91/130 (70.00%), Postives = 109/130 (83.85%), Query Frame = 2 Query: 53 WDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 442 WDGEK II+TCSFTPGSC+LTAYKLTPSGYEWGR N D G+NP GYLP+HYE+VQMLLSDRFLGF+MVP WNYNFMGV+H +MKY ++L P+E+YHE HRP+HFL F+ L+EGE+ DRED ++ Sbjct: 2206 WDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA 2335
BLAST of EY732426 vs. ExPASy Swiss-Prot
Match: PRP8_CAEEL (Pre-mRNA-splicing factor 8 homolog OS=Caenorhabditis elegans GN=prp-8 PE=1 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.299e-48 Identity = 85/131 (64.89%), Postives = 101/131 (77.10%), Query Frame = 2 Query: 53 WDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEG-EMAEGDREDTFS 442 WDGEK +++TCSFTPGS SLTAYKLTPSGYEWG+ N D G+NP GY+PTHYEKVQMLLSDRFLG++MVP NG WNYNF G + + +MK+ V L P+EYYHEDHRP HF F ++ DRED F+ Sbjct: 2199 WDGEKTVMITCSFTPGSVSLTAYKLTPSGYEWGKANTDKGNNPKGYMPTHYEKVQMLLSDRFLGYFMVPSNGVWNYNFQGQRWSPAMKFDVCLSNPKEYYHEDHRPVHFHNFKAFDDPLGTGSADREDAFA 2329
BLAST of EY732426 vs. ExPASy Swiss-Prot
Match: PRP8_DICDI (Pre-mRNA-processing-splicing factor 8 homolog OS=Dictyostelium discoideum GN=prpf8 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.031e-37 Identity = 72/118 (61.02%), Postives = 88/118 (74.58%), Query Frame = 2 Query: 44 HKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNL 397 +K WDGEK +I++ S C+LTAY LTPSG+EWG+ NKD+ N GY P YEKVQMLLSDRFLGFYMVPD G WNYNFMGVKH+ +M YG+KL P+ +Y E HRP HF ++ + Sbjct: 2193 NKSWDGEKTVIISVSVA-WPCTLTAYHLTPSGFEWGKNNKDS-LNYQGYQPQFYEKVQMLLSDRFLGFYMVPDRGSWNYNFMGVKHSTNMTYGLKLDYPKNFYDESHRPAHFQNWTQM 2308
BLAST of EY732426 vs. ExPASy Swiss-Prot
Match: SPP42_SCHPO (Pre-mRNA-splicing factor spp42 OS=Schizosaccharomyces pombe GN=spp42 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.264e-27 Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 2 Query: 44 HKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSNPH-GYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 442 H +WD K + LT S+ PGS SL AY ++ G EWG N D S+ GY P+ EK Q+LLSDR GF++VP+ G WNYNF G + M Y +KL P ++ +HRPTH + ++ LE + E D D F+ Sbjct: 2231 HPEWD-TKAVTLTVSYIPGSISLAAYTVSKEGIEWGSKNMDINSDEAIGYEPSMAEKCQLLLSDRIQGFFLVPEEGVWNYNFNGASFSPKMTYSLKLDVPLPFFALEHRPTHVISYTELETNDRLEEDMPDAFA 2363
BLAST of EY732426 vs. ExPASy Swiss-Prot
Match: PRP8_YEAST (Pre-mRNA-splicing factor 8 OS=Saccharomyces cerevisiae GN=PRP8 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.871e-25 Identity = 57/126 (45.24%), Postives = 72/126 (57.14%), Query Frame = 2 Query: 68 CIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGSN-PHGYLPTHYEKVQMLLSDRFLGFYMVPDNGPWNYNFMGVKHTVSMKYGVKLGTPREYYHEDHRPTHFLEFSNLEEGEMAEGDREDTFS 442 CI ++ TPGS SL+AY LT GY+WG NKD + G+ PT Q+LLSDR G +++P WNY FMG Y K G P E+Y+E HRP HFL+FS L E E ++ D FS Sbjct: 2288 CIDISIFSTPGSVSLSAYNLTDEGYQWGEENKDIMNVLSEGFEPTFSTHAQLLLSDRITGNFIIPSGNVWNYTFMGTAFNQEGDYNFKYGIPLEFYNEMHRPVHFLQFSELAGDEELEAEQIDVFS 2413 The following BLAST results are available for this feature:
BLAST of EY732426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY732426 ID=EY732426; Name=EY732426; organism=Citrus sinensis; type=EST; length=810bpback to top |