EY756422

Overview
NameEY756422
Unique NameEY756422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTC_SPIOL (Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.919e-39
Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 337
            +GTGS            RK GKAVRVVSFVSWELF++QSD YKESVLP+ V+ARVSIEAGSTFGW KIVGSKGKAIGID+FGASAPAGKIY+E+GIT EAV+ AAK VC
Sbjct:  633 IGTGSELEIAAKAGDELRKEGKAVRVVSFVSWELFEKQSDEYKESVLPSDVTARVSIEAGSTFGWHKIVGSKGKAIGIDKFGASAPAGKIYQEYGITVEAVVEAAKSVC 741          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTC_CRAPL (Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.979e-39
Identity = 82/108 (75.93%), Postives = 89/108 (82.41%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            +GTGS            RK GK VRVVSFVSWELFDEQS  YKESVLP++V+ARVSIEAGSTFGW KIVGSKGKAIGIDRFGASAPAGKIY+EFGIT EAV+ AAKE+
Sbjct:  411 IGTGSELEIAAKAGEVLRKEGKGVRVVSFVSWELFDEQSKEYKESVLPSSVTARVSIEAGSTFGWGKIVGSKGKAIGIDRFGASAPAGKIYEEFGITVEAVVAAAKEL 518          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTC_MAIZE (Transketolase, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.356e-36
Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAK 328
            +GTGS            RK GK VRVVSFVSWELFDEQSD YKESVLPAAV+AR+SIEAGST GW+K VG++GKAIGID+FGASAPAG IYKE+GIT E++I AAK
Sbjct:  568 MGTGSELEIAAKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGSTLGWQKYVGAQGKAIGIDKFGASAPAGTIYKEYGITVESIIAAAK 673          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTC_SOLTU (Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36
Identity = 77/108 (71.30%), Postives = 86/108 (79.63%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            +GTGS            +K GK VRVVSFV WEL+DEQS  YKESVLP++V+ARVSIEAGSTFGW+K VG KGKAIGID FGASAPA KIYKEFGITAEAV+ AAK+V
Sbjct:  633 IGTGSELEIAVKAAEELKKEGKTVRVVSFVCWELYDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKAIGIDGFGASAPADKIYKEFGITAEAVVAAAKQV 740          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT7_CRAPL (Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.362e-35
Identity = 70/109 (64.22%), Postives = 85/109 (77.98%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 337
            +GTGS            RK GK VRVVS V WELF EQS+ Y+E+VLP+ V+ARVS+EAGSTFGWE+ +G KGKA+GIDRFGASAPA +++KEFGIT EAV+ AAKE+C
Sbjct:  568 IGTGSELEIAARAGDELRKEGKKVRVVSLVCWELFAEQSEKYRETVLPSGVTARVSVEAGSTFGWERFIGPKGKAVGIDRFGASAPAERLFKEFGITVEAVVAAAKEIC 676          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKTA_CRAPL (Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.693e-34
Identity = 72/109 (66.06%), Postives = 83/109 (76.15%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 337
            +GTGS            RK GK VRVVS VSWELF EQS  YKE VLP+ V+ARVS+EAGSTFGWE+ VG KG+A+GIDRFGASA A ++YKEFGIT EAV+ AAKE+C
Sbjct:  571 MGTGSELEIAARAGEELRKEGKKVRVVSLVSWELFGEQSKEYKEMVLPSEVTARVSVEAGSTFGWERFVGLKGRAVGIDRFGASASAERLYKEFGITVEAVVAAAKELC 679          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT_ANASP (Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 53/108 (49.07%), Postives = 72/108 (66.67%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            +GTGS            +  GK VRVVS  +W+LFD Q  AYKESVLP AV+ R+++EA S+FGW K +GS+G A+ IDRFGASAP G   ++FG + + V+  AK++
Sbjct:  561 IGTGSELSLCVTAAEKLKAEGKKVRVVSLAAWDLFDAQDAAYKESVLPKAVTKRLAVEAASSFGWHKYIGSEGDAVTIDRFGASAPGGVCLEKFGFSVDNVLAKAKQL 668          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_VIBF1 (Transketolase 2 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=tkt2 PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GKAVRVVS  S + FD+Q +AY+E+VLP+AV+ R++IEAG    W K VG  GK IG+  FG SAPA +++K FG T E V+  AKE+
Sbjct:  554 IATGSEVELAIEAAAQLTAEGKAVRVVSMPSTDAFDKQDEAYREAVLPSAVTKRIAIEAGIADFWYKYVGFGGKIIGMTTFGESAPADELFKMFGFTTENVVNTAKEL 661          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT2_VIBCH (Transketolase 2 OS=Vibrio cholerae GN=tkt2 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GKAVRVVS  S + FD+Q  AY+E+VLPAAV+ R++IEAG    W K VG  G+ IG+  FG SAPAG+++K FG T E V+  AKE+
Sbjct:  555 IATGSEVELAVAAYEQLSAEGKAVRVVSMPSTDAFDKQDAAYREAVLPAAVTKRIAIEAGIADFWYKYVGFGGRIIGMTSFGESAPAGELFKLFGFTTENVVKQAKEL 662          
BLAST of EY756422 vs. ExPASy Swiss-Prot
Match: TKT1_VIBCH (Transketolase 1 OS=Vibrio cholerae GN=tkt1 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 2
Query:   11 VGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEV 334
            + TGS               GKAVRVVS  S + FD+Q  AY+E+VLPAAV+ R++IEAG    W K VG  G+ IG+  FG SAPAG+++K FG T E V+  AKE+
Sbjct:  556 IATGSEVELAVAAYEQLSAEGKAVRVVSMPSTDAFDKQDAAYREAVLPAAVTKRIAIEAGIADFWYKYVGFGGRIIGMTSFGESAPAGELFKLFGFTTENVVKQAKEL 663          
The following BLAST results are available for this feature:
BLAST of EY756422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
TKTC_SPIOL2.919e-3974.31Transketolase, chloroplastic OS=Spinacia oleracea ... [more]
TKTC_CRAPL4.979e-3975.93Transketolase, chloroplastic (Fragment) OS=Cratero... [more]
TKTC_MAIZE1.356e-3671.70Transketolase, chloroplastic OS=Zea mays PE=1 SV=1[more]
TKTC_SOLTU1.771e-3671.30Transketolase, chloroplastic OS=Solanum tuberosum ... [more]
TKT7_CRAPL4.362e-3564.22Transketolase 7 OS=Craterostigma plantagineum GN=T... [more]
TKTA_CRAPL3.693e-3466.06Transketolase 10 OS=Craterostigma plantagineum GN=... [more]
TKT_ANASP5.909e-2449.07Transketolase OS=Anabaena sp. (strain PCC 7120) GN... [more]
TKT2_VIBF18.830e-2047.22Transketolase 2 OS=Vibrio fischeri (strain ATCC 70... [more]
TKT2_VIBCH8.830e-2048.15Transketolase 2 OS=Vibrio cholerae GN=tkt2 PE=3 SV... [more]
TKT1_VIBCH8.830e-2048.15Transketolase 1 OS=Vibrio cholerae GN=tkt1 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-D09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756422 ID=EY756422; Name=EY756422; organism=Citrus sinensis; type=EST; length=655bp
CCACGCGTCCGTTGGAACTGGTTCTGAATTGGAAATTGCCGCCAAAGCAG
CTGAGGAACTTAGAAAGGGAGGAAAGGCTGTAAGAGTTGTCTCCTTTGTT
TCTTGGGAGCTTTTTGATGAGCAATCAGATGCCTACAAGGAAAGTGTGCT
TCCGGCTGCTGTCTCAGCTAGAGTTAGCATTGAAGCTGGATCTACATTTG
GGTGGGAGAAGATTGTTGGAAGCAAAGGAAAGGCCATCGGCATTGACCGA
TTCGGCGCTAGTGCACCAGCAGGCAAAATATACAAGGAGTTTGGTATCAC
CGCGGAGGCTGTTATCACTGCAGCCAAAGAAGTCTGCTAAGCTGGGGTAG
TCAAAAACTTCTTATTATTCCATATGCATTTGGGAATTGGTGATTACAGT
GAAGAGACCATTCCCAAGAGAGTTGCTTCATTATGGTCTCTCTTGTGTTA
ATAAAAGCAAGATTATTTTTCTTCCTTTTGCTTATTATTCCACTGCAGAG
CATCGTATATTGAAAATACAGAGACGGATACAGAGTATGGCTTGTTCATG
TTCATGAATTTGTATCACACTCTTGGACCTATCTCGAGATTTGGAATGTC
TCCTGATGATTGTGATGCAAATTTGCTCGTCCATCATCAAAAAAAAAAAA
AAAAA
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