EY756385

Overview
NameEY756385
Unique NameEY756385
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length915
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756385_ssr53 microsatellite EY756385_ssr53:53..64. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 3.686e-65
Identity = 110/156 (70.51%), Postives = 126/156 (80.77%), Query Frame = 1
Query:   91 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            NA V DFCVA+LK +++PAGYPC+ P  V A DFVFSGLG  GNTT+IINAAVTPAF AQFP +NGLGLS ARLDLA  GVIPMHTHP ASE+L V+ G ITAGF+ SSAN VYV+TLK G +M+FPQGLLHFQ+N+G   A   V+FNS NPGLQ
Sbjct:   16 NASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFV-SSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQ 170          

HSP 2 Score: 45.4394 bits (106), Expect = 3.686e-65
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGTG 670
            F L  ++L ++LV  TTFLD  TVK+LKG+LGGTG
Sbjct:  174 FALFANSLPTELVVGTTFLDATTVKKLKGVLGGTG 208          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 6.832e-64
Identity = 109/156 (69.87%), Postives = 126/156 (80.77%), Query Frame = 1
Query:   91 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            +A V DFCVAD K  D PAGY C  PA+VT +DFV+SGLG+AGNTT+I  AAVTPAF AQFP VNGLG+SLARLDL  GGV+P HTHP ASE+LLVV G I AGF++S  NT Y+KTLKKGDI++FPQGLLHFQVN G   A+ F SF+SP+PGLQ
Sbjct:   17 HASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQ 171          

HSP 2 Score: 40.0466 bits (92), Expect = 6.832e-64
Identity = 17/34 (50.00%), Postives = 26/34 (76.47%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGT 667
            F L  ++L+++L+ QTT LD   +K+LKG+LGGT
Sbjct:  175 FALFKNDLATELIAQTTLLDAPQIKKLKGVLGGT 208          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 2.151e-62
Identity = 106/156 (67.95%), Postives = 124/156 (79.49%), Query Frame = 1
Query:   91 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            NA V DFCVADL   + PAG+ C  PA V  +DFVFSGLG+AGNT++II AAVTPAFVAQFP VNGLG+S+ARLDLA GGV+P HTHP ASE+L+V  G I AGF++S  NT Y++TL+KGDIM+FPQGLLHFQVN G   AL F SF S +PGLQ
Sbjct:   22 NAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASD-NTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQ 176          

HSP 2 Score: 42.3578 bits (98), Expect = 2.151e-62
Identity = 18/34 (52.94%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGT 667
            F L  ++L ++++ QTTFLD A +K+LKG+LGGT
Sbjct:  180 FALFKNDLPTEVIAQTTFLDAAQIKKLKGVLGGT 213          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.798e-61
Identity = 100/155 (64.52%), Postives = 121/155 (78.06%), Query Frame = 1
Query:   94 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            A+  DFCVADL  SD+PAGYPC   A V A DF + GL  AGNT+++I AAVTPAFV QFP VNGLG+S ARLD+A GGV+P+HTHPAASE+L V  G + AGFI+SS+NTVY +TL  GDIM+FPQGLLH+Q N+G   A+  V+F+ PNPGLQ
Sbjct:   23 ALTQDFCVADLTCSDTPAGYPC--KASVGAGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQ 175          

HSP 2 Score: 45.8246 bits (107), Expect = 1.798e-61
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGTG 670
            + L  +NL S +VE+ TFLDDA VK+LK +LGG+G
Sbjct:  179 YALFANNLPSAIVEKVTFLDDAQVKKLKSVLGGSG 213          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.798e-61
Identity = 106/156 (67.95%), Postives = 126/156 (80.77%), Query Frame = 1
Query:   91 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            N  V DFCVA+LK +++PAGYPC+ P  V A DFVFS LG  GNTT+II+AAVTP FVAQFPA+NGLG+S ARLDLA  GVIPMHTHP ASE+L V+ G ITAGFI SSAN+VYV+TLK G +M+FPQGLLHFQ+N+G   A   V+F+S +PGLQ
Sbjct:   16 NDSVQDFCVANLKRAETPAGYPCIRPIHVKASDFVFS-LGTPGNTTNIISAAVTPGFVAQFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFI-SSANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQ 169          

HSP 2 Score: 46.2098 bits (108), Expect = 1.798e-61
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGTG 670
            F L  + LS++LV  TTFL  ATVK LKG+LGGTG
Sbjct:  173 FALFANTLSTELVSATTFLPPATVKTLKGVLGGTG 207          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 5.659e-60
Identity = 102/155 (65.81%), Postives = 120/155 (77.42%), Query Frame = 1
Query:   94 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            A V DFCVAD K   SP+GY C  P  VT +DF F+GLG AGNT++II AAVTPAF   +  +NGLG+SLARLDLA GGVIP+HTHP ASE+L+V+ G I AGFI SSAN VY+KTL +GD M+FPQGLLHFQ+NSG   AL FV+F S +PGLQ
Sbjct:   20 ASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI-SSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQ 173          

HSP 2 Score: 47.3654 bits (111), Expect = 5.659e-60
Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGT 667
            F L  ++L S+LVE TTFL DA VK+LKG+LGGT
Sbjct:  177 FALFANDLPSELVEATTFLSDAEVKKLKGVLGGT 210          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.610e-59
Identity = 113/156 (72.44%), Postives = 126/156 (80.77%), Query Frame = 1
Query:   91 NAMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            +A V DFCVAD K  D PAGY C  PA VT +DFV+SGLG+AGNTT+II AAVTPAF AQFP VNGLG+SLARLDL  GGVIP HTHP ASE+LLVV G I AGF++S  NT Y+KTLKKGDIM+FPQGLLHFQVN G   AL F SF+SP+PGLQ
Sbjct:   17 HASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQ 171          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.322e-58
Identity = 101/155 (65.16%), Postives = 119/155 (76.77%), Query Frame = 1
Query:   94 AMVNDFCVADLKLSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            A V DFCVAD K   +P+GY C  P  VT +DF FSGLG AGNT+++I AAVTPAF   F  +NGL +SLARLDLA GGVIP+HTHP ASE+L+V+ G I AGFI SSAN VY+KTL +GD M+FPQGLLHFQ+NSG   AL FV+F S +PGLQ
Sbjct:   20 ASVQDFCVADPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTSNVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI-SSANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQ 173          

HSP 2 Score: 45.4394 bits (106), Expect = 2.322e-58
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGT 667
            F L  ++L S+LVE TTFL D  VK+LKG+LGGT
Sbjct:  177 FALFANDLPSELVEATTFLSDEEVKKLKGVLGGT 210          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.456e-47
Identity = 100/157 (63.69%), Postives = 111/157 (70.70%), Query Frame = 1
Query:   91 NAMVNDFCVADLK-LSDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            NA VNDFCVA+     D+P+G+ C   A VTA DFV+SGL   GNTT+IINAAVTPAFV QFP V GLG++LARLDLA GGVIPMHTHP ASEIL VV G I A FI SS N VY K L  GD+M+FPQGLL FQ  +G   A G       NPGLQ
Sbjct:   21 NASVNDFCVANGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFI-SSGNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPGLQ 175          

HSP 2 Score: 31.5722 bits (70), Expect = 4.456e-47
Identity = 18/42 (42.86%), Postives = 25/42 (59.52%), Query Frame = 2
Query:  542 RILDSNHRFRLICHNLSSQLVEQTTFLDDATVKRLKGILGGT 667
            +IL+  H F  I      + +  TT LD+AT+K+LK  LGGT
Sbjct:  175 QILEFQHCFPTI---FPPKTIAGTTCLDEATIKKLKSGLGGT 213          
BLAST of EY756385 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.829e-45
Identity = 83/156 (53.21%), Postives = 108/156 (69.23%), Query Frame = 1
Query:   94 AMVNDFCVADLKL-SDSPAGYPCVPPAMVTADDFVFSGLGVAGNTTSIINAAVTPAFVAQFPAVNGLGLSLARLDLAKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQ 558
            A+  DFCVA+L L +D+P+GY C P A VTA DF    L   G      N ++  AFV Q+PAVNGLG+S +R+D+  GGV+P+HTHPA SE+L V+ G + AGFISSS N VY K + KG + +FPQGLLHFQ N+G   A+ F +++S NPGLQ
Sbjct:   26 ALTQDFCVANLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQ 181          

HSP 2 Score: 31.9574 bits (71), Expect = 6.829e-45
Identity = 15/35 (42.86%), Postives = 22/35 (62.86%), Query Frame = 2
Query:  566 FRLICHNLSSQLVEQTTFLDDATVKRLKGILGGTG 670
            + L  +NL +  V + TFL +A V+RLK   GG+G
Sbjct:  185 YALFANNLPTSYVVKGTFLAEAEVRRLKSKFGGSG 219          
The following BLAST results are available for this feature:
BLAST of EY756385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
GL31_ARATH3.686e-6570.51Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
AB19B_PRUPE6.832e-6469.87Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
ABP20_PRUPE2.151e-6267.95Auxin-binding protein ABP20 OS=Prunus persica GN=A... [more]
GL814_ORYSJ1.798e-6164.52Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA1.798e-6167.95Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL33_ARATH5.659e-6065.81Germin-like protein subfamily 3 member 3 OS=Arabid... [more]
AB19A_PRUPE2.610e-5972.44Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GLP1_SINAL2.322e-5865.16Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2... [more]
GLP1_IPONI4.456e-4763.69Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL813_ORYSJ6.829e-4553.21Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-008-A06-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756385 ID=EY756385; Name=EY756385; organism=Citrus sinensis; type=EST; length=915bp
CCACGCGTCCGAAAATAACTACACTAAATATTAGTCAAAATGCTTCACAT
TCTCTTCTTCTTCTTCCTTGCTTTCGTATCCTCTTCCTCCAATGCTATGG
TTAACGACTTCTGCGTCGCTGACCTAAAGCTGTCGGATAGTCCCGCCGGC
TATCCTTGCGTGCCCCCTGCTATGGTTACCGCTGACGACTTCGTATTTTC
GGGCCTCGGCGTGGCCGGAAACACCACGAGTATTATCAACGCGGCAGTGA
CACCTGCATTTGTAGCTCAATTTCCGGCCGTGAATGGCCTCGGACTCTCC
TTGGCACGCCTAGATCTTGCAAAGGGTGGCGTAATCCCAATGCACACTCA
TCCAGCTGCTTCCGAAATCCTTCTTGTTGTGCATGGCTGCATAACTGCCG
GGTTCATTTCCTCTTCAGCTAACACTGTTTACGTAAAGACGCTTAAGAAG
GGAGATATCATGATCTTTCCACAAGGGTTGTTGCATTTTCAAGTAAATTC
CGGCGCGGACGGAGCCCTCGGTTTTGTTAGCTTCAACAGCCCGAATCCTG
GACTCCAATCACCGATTTCGCCTTATTTGCCACAACTTGTCTTCCCAATT
GGTGGAGCAGACCACTTTCCTTGACGATGCTACGGTGAAGAGGCTCAAGG
GTATCCTTGGTGGCACCGGCTAGGCTTATTAGTTACACATTCTTCATTTG
NNNAGTTTGAGTCTNAANNTTCATTTAGTGCTAATGGATTTNNGATGTGG
AATTCACGAGTAGTATTTTCTCTGGTCTCACTTCCCNTATCTTTCTCTGA
ATAATAAATTCTCTCATTAAAAAAAAAAAAAAGGCNGCCCGTCTAAAGAT
TCAAGTTTCGTACCGTGCATGCGAGTCATACTCTCTATAGGCACCTAATT
CATTACTGGCGCCGT
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