EY732178

Overview
NameEY732178
Unique NameEY732178
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length887
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY732178 vs. ExPASy Swiss-Prot
Match: C72A1_CATRO (Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.016e-36
Identity = 77/173 (44.51%), Postives = 112/173 (64.74%), Query Frame = 1 
Query:  142 VLPFSMYHLPLTSNMCVYW*KISAGKNSFMWFGPTPRVNIMNPDQIKEIFTRINDFQKVNSI--PLSRLLIVGLATLEGEKWAKHRKLINPAFHQEKLKLMLPAFYLSCIEIITKWEKQMSVEGSSELDVWPYLANLTGDVISRTAFGSSYEEGRRIFQLQAELAELTMQVFR 654
            ++P  M H+  T N        + G+NSF W G  PR+++M P+ IKE+ T  + +QK   +  PL + L+ G+ + EG KW+KHR++I+PAF  EKLK MLPAF +   +++TKWEK    +GS E+D++P    LT DVIS+ AFGS+YEEG +IF+L  EL +LT+   R
Sbjct:   80 IVPRLMPHINHTIN--------TYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAFAICYHDMLTKWEKIAEKQGSHEVDIFPTFDVLTSDVISKVAFGSTYEEGGKIFRLLKELMDLTIDCMR 244
The following BLAST results are available for this feature:
BLAST of EY732178 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
C72A1_CATRO5.016e-3644.51Secologanin synthase OS=Catharanthus roseus GN=CYP... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-056-G10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY732178 ID=EY732178; Name=EY732178; organism=Citrus sinensis; type=EST; length=887bp
CCACGCGTCCGCTAATTGTTTACCTTATAATGGGCAAAGTTGCTTGTTAG
ATCTTTTCTGCTTGAAGTAAAATCAATTAGTATGAATGATTATCCTTTGA
CTGATTTGTGAATAATATCACTAAATTTTCACAGCTTAGGTGTACTACCA
TTTTCAATGTACCATCTGCCTCTAACAAGTAACATGTGCGTATATTGGTA
AAAAATTTCTGCAGGTAAGAATTCTTTCATGTGGTTTGGTCCGACACCAA
GGGTGAATATTATGAATCCTGATCAAATAAAAGAGATATTTACCAGGATC
AATGATTTTCAAAAAGTCAATTCAATCCCACTTTCCAGGCTGCTGATAGT
TGGATTGGCTACCCTTGAGGGGGAGAAGTGGGCTAAACATAGAAAACTCA
TCAACCCAGCCTTCCACCAAGAGAAGCTCAAGCTTATGTTGCCAGCATTC
TACTTGAGTTGTATCGAAATAATTACAAAATGGGAGAAGCAAATGTCTGT
AGAAGGATCATCTGAGTTGGATGTATGGCCTTATCTTGCAAATTTGACAG
GTGATGTGATTTCTCGAACGGCTTTTGGGAGTAGTTATGAAGAAGGAAGA
AGGATTTTTCAGCTCCAGGCAGAGCTAGCTGAACTCACAATGCAAGTCTT
TCGGTCCAGTTCACATTCCAGGGATGGAGGTATATTCACATGTCTCTTCA
CTGGAAACATTCATATATACATGTCATATAGGATTATTCATGAGTAGGCT
TCGATAACTTTGCAGGAGTTATGTGCTTTCGCGCCAGATATAGAAGTAGA
CCCACCTGATCCGGCCCGAAAACTGGAACGTGCGATCCTAGAGGTATCCA
AGAGGGCCCGGCAAATTCTGGGGGGGGAATAAGGGGG
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