EY756278

Overview
NameEY756278
Unique NameEY756278
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7004 contig Csv1_Contig7004:443..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY756278 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.099e-17
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 3 
Query:   12 AISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 155
            AI+EYKGTVITVSHDRYF+KQIVNRV+EV+   L DYAGDYNY+LEKN
Sbjct:  571 AINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYFLEKN 618
[Close]
BLAST of EY756278 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.601e-16
Identity = 38/48 (79.17%), Postives = 44/48 (91.67%), Query Frame = 3 
Query:   12 AISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 155
            AI+EY+GTVI VSHDRYF+KQIVNRV+EV+   L+DYAGDYNYYLEKN
Sbjct:  585 AINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKN 632
The following BLAST results are available for this feature:
BLAST of EY756278 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
AB2F_ARATH7.099e-1781.25ABC transporter F family member 2 OS=Arabidopsis t... [more]
AB5F_ARATH4.601e-1679.17ABC transporter F family member 5 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-006-F08-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756278 ID=EY756278; Name=EY756278; organism=Citrus sinensis; type=EST; length=666bp
CCACGCGTCCGGCCATATCAGAGTACAAGGGCACAGTAATCACAGTTTCT
CATGACCGATACTTCGTAAAGCAAATAGTTAATAGAGTAGTGGAGGTTAA
AGGCAGCAATTTACAGGACTATGCTGGTGATTACAATTATTACCTAGAGA
AAAACCTCGATGCTCGGGAAAAGGAGCTTGAACGTGAGGCAGAGCTCGAA
GAAAGGGCTCCAAAAATCAAGGCCAAATCCAAGATGTCAAAGGCTGAGAA
GGAAGCTCGGAAGAAACAGAAAATGCAGGCCTTCCAGGCAGCGAAACAAA
AATCAAAAGGCTCGAAGAATGCAAAGAGATGGAAATGAGAGATAAACCCA
GTATATTATGCGGAAGATAATCCATTGTAACTTAATTTTGCTGAGCAAAT
TTCCAGGAAGCAGTATGGGCAATGGTGAGTCTGCAAACTAGGGGGTCTGC
TGTATAGGCATACTGATTGTAGTTAAGGGCTGAAATGGAAAAATCTTTTG
GCAGAAATTTGTGATTTTTTGCTTCCCTGGCAATTTCTGCCTCAAGAGAG
TCGAGAAGCTGTAATTTATGGCATAAACGTTATGCAAACAGCATTTTAGG
GCCATTTTTAGATCTGCTTATTCCTGAATAAAGTGGAATCTTACTGTCAA
AAAAAAAAAAAAAAAA
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