EY756157

Overview
NameEY756157
Unique NameEY756157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756157 vs. ExPASy Swiss-Prot
Match: IQD14_ARATH (Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQD14 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.786e-49
Identity = 120/246 (48.78%), Postives = 154/246 (62.60%), Query Frame = 2
Query:   14 SLLTKEEMEARMQRKVEAMIKRERAMAYAYSHQLWKSTPKSAQTSLADIRSGGFPWWWNWLERQLPGANTPE--TSAMKNFQLTPPRPNSEIKPSPRVQASTHKQHNFEFSN-MDTPTPKSAKSTILTATRPVRSPSSSKIPQGSPSLSKYSRARVSGAASPFDVPLRDDDSLMSCPPFSVPNYMTPTVSAKAKVRPNSNPKERFPGTPSSESQRRLSFPLHKALALSSGKKVIALY*QDSSSQRG 742
            S+LTKEE ++R QRK +A+IKRER+MAYAYS +LWK++PKS Q    D RS  FP WWNW++RQ P A+     +   ++F+LTP    S + PSP  Q+S  KQH+    N  DT TP+S++ST  T +RP+ +             S+YSR R+ G  SPF    +DDDSL SCPPF  P+YM PTVSAKAKVRPNSNPKER  GTP SE +R    P       + G  V++    +SSS RG
Sbjct:  414 SVLTKEERDSRSQRKTDAIIKRERSMAYAYSRKLWKNSPKSTQ----DNRS--FPQWWNWVDRQNPLASPAPSYSQPQRDFRLTP----SRLCPSPLSQSS--KQHHIRLDNHFDTSTPRSSRSTFHTPSRPIHT-----------GTSRYSRGRLRGQDSPF----KDDDSLTSCPPF--PSYMAPTVSAKAKVRPNSNPKERVMGTPVSEKRRMSYPPTQDTFRWNKGSLVMS----NSSSHRG 626          
BLAST of EY756157 vs. ExPASy Swiss-Prot
Match: IQD1_ARATH (Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD1 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13
Identity = 76/232 (32.76%), Postives = 100/232 (43.10%), Query Frame = 2
Query:   23 TKEEMEARMQRKVEAMIKRERAMAYAYSHQL-WKSTPKSAQTSLADIRSGGFPWWWNWLERQLPGANTPETSAMKNFQLTPPRPNSEIKPSPRVQA---STHKQHNFEFSNMDT-PTPKSAKSTILTATRPVRS-PSSSKIPQGSPSLSKYSRARVSGAASPFDVPLRDDDSLMSCPPFSVPNYMTPTVSAKAKVRPNSNPKERFPGTPSSESQRRL---SFPLHKALALSS 691
            +KE++EA M  K EA ++RERA+AYA++HQ   KS  K+A     D       W W+WLER + G   P  S+ K  Q T    NS +K S    +    T K  N    N  T P   SA ST     R  R  PSS K            R R    A P    + DD++L S       N +  T SA+ K  P S    R   T S+  +  +     P  K L+ S+
Sbjct:  207 SKEQVEAGMLHKYEATMRRERALAYAFTHQQNLKSFSKTANPMFMD--PSNPTWGWSWLERWMAG--RPWESSEKE-QNTTNNDNSSVKNSTNRNSQGGETAKSSNRNKLNSSTKPNTPSASSTATRNPRKKRPIPSSIKSKSSDDEAKSSERNRRPSIARP---SVSDDETLSSSTARRSSNLIPTTKSARGK--PKSQTSSRVAVTTSTTEESSILPEKAPAKKRLSTSA 428          
The following BLAST results are available for this feature:
BLAST of EY756157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
IQD14_ARATH1.786e-4948.78Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana GN=IQ... [more]
IQD1_ARATH6.000e-1332.76Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana GN=IQD... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-005-C10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756157 ID=EY756157; Name=EY756157; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGCCAGCTTGCTTACAAAAGAAGAGATGGAGGCAAGAATGC
AGAGAAAGGTAGAGGCAATGATCAAGAGAGAAAGAGCCATGGCCTATGCA
TACTCCCACCAGTTGTGGAAATCCACTCCAAAATCAGCTCAGACATCTCT
TGCGGATATCAGATCAGGAGGATTCCCGTGGTGGTGGAACTGGTTAGAAC
GTCAACTGCCTGGGGCTAATACTCCTGAAACTTCAGCCATGAAGAATTTC
CAACTTACCCCACCAAGGCCAAATTCTGAGATCAAGCCTAGCCCACGCGT
ACAAGCTAGCACTCACAAGCAACATAATTTCGAGTTCAGTAACATGGATA
CTCCCACACCAAAATCTGCAAAATCAACCATACTCACAGCAACACGACCT
GTTCGAAGTCCATCCTCAAGTAAGATCCCACAAGGCAGTCCAAGCCTGTC
AAAATACTCGAGAGCAAGAGTTAGTGGAGCTGCTTCTCCTTTTGACGTAC
CATTGAGGGACGATGACAGCCTCATGAGCTGCCCGCCATTTTCTGTTCCA
AACTATATGACACCGACCGTTTCGGCAAAAGCAAAAGTGAGACCTAATAG
TAATCCTAAGGAGAGGTTCCCAGGAACTCCAAGCAGTGAATCACAAAGAA
GGCTTTCTTTCCCTTTACACAAGGCATTGGCTCTTTCAAGTGGAAAAAAG
GTCATTGCTCTCTACTAGCAGGATTCCAGCTCTCAAAGGGGTTTAGACAG
AAATCATCTCTACATCTATAGGAAAATTGAGTGTGGTTTCACTGTTTCAT
GCCNGCTACTGTCNGTCGGAAGCCGTTACCGAATCNGGGATTTTTTTTTC
CAAAATTTTTACTTTTTCCTTGGATTCTGGGGGGTATTG
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