EY756054

Overview
NameEY756054
Unique NameEY756054
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY756054 vs. ExPASy Swiss-Prot
Match: TCP1A_TOBAC (Two pore calcium channel protein 1A OS=Nicotiana tabacum GN=TPC1A PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.216e-29
Identity = 68/123 (55.28%), Postives = 71/123 (57.72%), Query Frame = 2
Query:   65 DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRVDVLLHHMLSAEL 433
            DLA +DYLLFNFNDYPNGMVTLFN+LVMGNWQVWMQSYKELTGTAWT AYFVSFY                EAF A                               SQRVD LLHHML +EL
Sbjct:  605 DLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTAWTYAYFVSFYLISVLWLLNLIVAFVLEAFQAEVDLEASARCVDGDDKEAKSERRRNVGTKTRSQRVDFLLHHMLRSEL 727          
BLAST of EY756054 vs. ExPASy Swiss-Prot
Match: TPC1B_TOBAC (Two pore calcium channel protein 1B OS=Nicotiana tabacum GN=TPC1B PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.392e-29
Identity = 67/123 (54.47%), Postives = 71/123 (57.72%), Query Frame = 2
Query:   65 DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRVDVLLHHMLSAEL 433
            DLA +DYLLFNFNDYPNGMVTLFN+LVMGNWQVWMQSYKELTGT+WT AYFVSFY                EAF A                               SQRVD LLHHML +EL
Sbjct:  605 DLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTSWTYAYFVSFYLISVLWLLNLIVAFVLEAFQAEMDLEASARCVDGDDKEAKRERRRNVGTKTRSQRVDFLLHHMLRSEL 727          
BLAST of EY756054 vs. ExPASy Swiss-Prot
Match: TPC1_ARATH (Two pore calcium channel protein 1 OS=Arabidopsis thaliana GN=TPC1 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27
Identity = 65/125 (52.00%), Postives = 71/125 (56.80%), Query Frame = 2
Query:   65 DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRVDVLLHHMLSAELQK 439
            +LA+DDYLLFNFNDYPNGMVTLFNLLVMGNWQVWM+SYK+LTGT W++ YFVSFY                EAFF                                SQRVD LLHHML  EL K
Sbjct:  602 ELAEDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMESYKDLTGTWWSITYFVSFYVITILLLLNLVVAFVLEAFFT-ELDLEEEEKCQGQDSQEKRNRRRSAGSKSRSQRVDTLLHHMLGDELSK 725          
BLAST of EY756054 vs. ExPASy Swiss-Prot
Match: TPC1_WHEAT (Two pore calcium channel protein 1 OS=Triticum aestivum GN=TPC1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.340e-26
Identity = 63/129 (48.84%), Postives = 72/129 (55.81%), Query Frame = 2
Query:   65 DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRVDVLLHHMLSAELQKSCDS 451
            DL ++DYLLFNFNDYP+GMVTLFNLLVMGNWQVWM+SY +LTGT+W+L YFVSFY                EAFFA                                  VD+LLHHMLS EL  S +S
Sbjct:  614 DLFNNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGTSWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQNPTSGGIKKRRSMRVRSKGTMVDILLHHMLSNELDGSQNS 742          
BLAST of EY756054 vs. ExPASy Swiss-Prot
Match: TPC1_HORVU (Two pore calcium channel protein 1 OS=Hordeum vulgare GN=TPC1 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 62/129 (48.06%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   65 DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRVDVLLHHMLSAELQKSCDS 451
            DL  +DYLLFNFNDYP+GMVTLFNLLVMGNWQVWM+SY +LTG++W+L YFVSFY                EAFFA                                  VD+LLHHMLS EL  S +S
Sbjct:  614 DLFSNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGSSWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQSPTSGGIKKRRSMRVRSKGTMVDILLHHMLSNELDGSQNS 742          
BLAST of EY756054 vs. ExPASy Swiss-Prot
Match: TPC1_ORYSJ (Two pore calcium channel protein 1 OS=Oryza sativa subsp. japonica GN=TPC1 PE=1 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.693e-25
Identity = 60/126 (47.62%), Postives = 68/126 (53.97%), Query Frame = 2
Query:   65 DLADDDYLLFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTAWTLAYFVSFYXXXXXXXXXXXXXXXXEAFFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQRVDVLLHHMLSAELQKS 442
            DL  +DYLLFNFNDYP+GMVTLFNLLVMGNWQ WM+SY++LTG+ W+L YFVSFY                EAFFA                                  VD+LLHHMLS EL  S
Sbjct:  627 DLFSNDYLLFNFNDYPSGMVTLFNLLVMGNWQAWMESYRQLTGSYWSLIYFVSFYLISVLLLLNLIVAFVLEAFFAEMELEKDGEADIQDPTLEGRNRRRSVRVRTKGTMVDILLHHMLSNELDGS 752          
The following BLAST results are available for this feature:
BLAST of EY756054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
TCP1A_TOBAC4.216e-2955.28Two pore calcium channel protein 1A OS=Nicotiana t... [more]
TPC1B_TOBAC9.392e-2954.47Two pore calcium channel protein 1B OS=Nicotiana t... [more]
TPC1_ARATH1.771e-2752.00Two pore calcium channel protein 1 OS=Arabidopsis ... [more]
TPC1_WHEAT3.340e-2648.84Two pore calcium channel protein 1 OS=Triticum aes... [more]
TPC1_HORVU1.269e-2548.06Two pore calcium channel protein 1 OS=Hordeum vulg... [more]
TPC1_ORYSJ3.693e-2547.62Two pore calcium channel protein 1 OS=Oryza sativa... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-003-A11-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756054 ID=EY756054; Name=EY756054; organism=Citrus sinensis; type=EST; length=721bp
ACTGGTACCCTGCGGTACCGGTCCGGATTCTTTCGTAGACCCCGCGTCCG
AAGTTAGAATACCAGATCTTGCTGATGATGATTATTTACTTTTTAATTTT
AATGACTATCCAAATGGAATGGTGACACTTTTCAATTTGCTCGTCATGGG
AAATTGGCAAGTTTGGATGCAGAGCTACAAAGAGTTGACAGGAACTGCTT
GGACTCTAGCATATTTCGTCAGCTTCTACCTAATAACTGTTTTACTACTA
TTGAATTTGGTCATAGCTTTTGTCTTGGAGGCATTCTTTGCCGAAATGGA
ACTCGAGAGTTCAGAGAAATGTGAAGAAGAGGACAAGGATGGGGAACCAA
GGGAACGGCGCCGACGTGTTGGTACAAAAACTCGAAGTCAGAGGGTGGAT
GTCCTTCTCCATCATATGCTCAGCGCGGAGCTGCAAAAATCATGTGATTC
TTAGGGCTTGTTTGTTAAATATATGAAGTTTGAAAATTTATGATTTTCAG
ACTTTTTTTAAGTTTTGCTTGTTTGTTATTCTTATTTTAAATCTCAATTT
CAGATATATGCTACTTAATAGAATAAGTTAAATAACTTTATTTTTATTTG
AATTGAAAAAATCTGGATGAAAATCAACTATAATCTCTCAAAAAGACCCC
TATTTAACAGGCTTTTTTTCAATTCAATTAAATTGATTTCTATTTTAAAA
AAAAAAAAAAAAAAAAAAAAA
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