EY756035
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 388.267 bits (996), Expect = 3.401e-107 Identity = 193/243 (79.42%), Postives = 208/243 (85.60%), Query Frame = 3 Query: 39 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSA---SFKVEAK-GEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGIFNPLNFAPTDXAKEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL-*PWH 752 MATVTT ASA++FRPC SK RFLTGSSG+LNR+++ + SSA SFKVEAK GEWLPGLASP YL GSL GDNGFDPLGLAEDPENLKW+VQAELVN RWAMLGV GMLLPEVFTKIGIINVP+WYDAGK +YFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP EVGYPGGIFNPLNFAPT AKE +GRLAM AFLGF+VQ +VTGKG + +L PWH Sbjct: 1 MATVTTHASASIFRPCTSKPRFLTGSSGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWH 243
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 8.377e-106 Identity = 195/242 (80.58%), Postives = 206/242 (85.12%), Query Frame = 3 Query: 39 MATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPV--SSSASFKVEAK-GEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGIFNPLNFAPTDXAKEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL-*PWH 752 MATVTTQASAA+F PC KSRFL GSSGKLNR VA +PV S SASFKVEAK GEWLPGLASP YL GSLPGDNGFDPLGLAEDPENL+W+VQAELVN RWAMLGV GMLLPEVFT IGIINVP+WY AGK EYFASSSTLFVIEFIL HYVEIRRWQDIKNPGSVNQDPIFKQYSLP+ EVGYPGGIFNPLNFAPT AKE +GRLAM AFLGFI+Q +VTGKG ++ PWH Sbjct: 1 MATVTTQASAAIFGPCGLKSRFLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWH 242
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 2.634e-67 Identity = 129/203 (63.55%), Postives = 151/203 (74.38%), Query Frame = 3 Query: 150 PVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDA-GKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGIFNPLNFAPTDXAKEXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL-*PWH 752 P S+ V+AKG WLPGL SP YL+GSL GDNGFDPL LAEDPE+L+W+VQA++VN RWAMLGV GML+PEV TK G++N P+W GK YFASSST + + YVEIRRWQDIKNPGSVNQDPIFK YSLP +E GYPG +FNPLNFAP + KE +GRLAM AFLGF+VQ +V GKG + +L PWH Sbjct: 21 PRSTRRDVAVQAKGSWLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRVFNPLNFAPLEN-KEKELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWH 221
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.112e-49 Identity = 107/227 (47.14%), Postives = 136/227 (59.91%), Query Frame = 3 Query: 87 ASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGE---WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGI-FNPLNFAPTDXAK-----EXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740 A+K+ FL G ++++ +A S A V A + W PG P +L+GSLPGD GFDPLGL DPE+LKW QAELV+SRWAMLG G+ +PE TKIG++N P WY AG+ EYF ++TLFVIE +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + AK +GRLAM A +G Q TG G + +L Sbjct: 29 ATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 255
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 2.097e-48 Identity = 102/226 (45.13%), Postives = 135/226 (59.73%), Query Frame = 3 Query: 90 SKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGE---WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGI-FNPLNFAPTDXAK-----EXGACHGRLAMXAFLGFIVQXHVTGKGHLKTSCTYL 740 +K+ FL G ++++ S+ + V A + W PG P +L+GSLPGD GFDPLGLA DPE+L+W QAELV+ RWAMLG G+ +PE+ TKIGI+N P WY AG+ EYF ++TLF++E +L + E RRW DI PG VN DPIF L +VGYPGG+ F+PL + AK +GRLAM A +G Q TG G + +L Sbjct: 30 TKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHL 255
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.148e-28 Identity = 93/253 (36.76%), Postives = 129/253 (50.99%), Query Frame = 3 Query: 42 ATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ-----WYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PSNEVGYPGG-IFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKG 713 ++++T A AA + S+ +T + + R + PV A+ ++ W S +YL+G LPGD GFDPLGL+ DPE KW E++N R+AMLG G + PE+ K G+I PQ W+ AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L S + YPGG +FNPL F + + K +GRLAM A LG+ +Q VTG G Sbjct: 10 SSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQL-----WFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLI--PQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVG 249
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.562e-27 Identity = 84/202 (41.58%), Postives = 106/202 (52.48%), Query Frame = 3 Query: 195 WLPGLASPTYLNGSLPGDNGFDPLGLAEDPENL------KWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQ-----WYD------AGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSL-------PSNEVGYPGG-IFNPLNFAPTDXA----KEXGACHGRLAMXAFLGFIVQXHVTGKG 713 W S +YL+GSLPGD GFDPLGL+ DPE +W E++N R+AMLG VG + PE K+G+I PQ W+ AG Y+A + TLFV+E L + E RR+QD PGS+ KQY L S YPGG FNPL F + + K +GRLAM A LG+ +Q VTG G Sbjct: 58 WFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGKVGLI--PQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMG-----KQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 251
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 9.479e-25 Identity = 77/212 (36.32%), Postives = 109/212 (51.42%), Query Frame = 3 Query: 159 SSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGIFNPLNF----APTDXAKEXGACHGRLAMXAFLGFIVQXHV-TGKGHLKTSCTYL-*PWH 752 ++ S +V EW PG P +L+GS PGD GFDPLGLA PEN + + ++E+ + RWAML V G+L+PE + +W G+A Y + + T+ IEF+ + E +R ++ +DP K+ YPGG F+PL F A + K +GRLAM AF+GF VQ G G L+ T+L PWH Sbjct: 36 ATTSGRVTMSAEWFPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGNWVKAQEWAALPDGQATYLGNPVPWGNLPTILAIEFLAIAFAEQQR--------TMEKDPEKKK---------YPGGAFDPLGFSKDPAKFEELKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWH 230
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.238e-24 Identity = 76/231 (32.90%), Postives = 116/231 (50.22%), Query Frame = 3 Query: 102 FLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQW--YDAGKAEY------FASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPSNEVGYPGGIFNPLNF----APTDXAKEXGACHGRLAMXAFLGFIVQXHV-TGKGHLKTSCTYL-*PWH 752 FL+ + K + + +++ + +W+PG P+YL+GS PGD GFD LGL E P NL+ Y ++EL++ RWAML V G+++PE + +W G+A Y + + T+ IEF+ +VE +R S+ +D S + YPGG F+PL + A + K +GRLA+ A +GF VQ G G L+ T+L PWH Sbjct: 18 FLSSTKSKFAAAMPVYVGATNFMSRFSMSADWMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILAIEFLAIAFVEHQR--------SMEKD---------SEKKKYPGGAFDPLGYSKDPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWH 231
BLAST of EY756035 vs. ExPASy Swiss-Prot
Match: CB4_SPIOL (Chlorophyll a-b binding protein CP24, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.159e-22 Identity = 72/195 (36.92%), Postives = 100/195 (51.28%), Query Frame = 3 Query: 186 KGEWLPGLAS------PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGK---AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPSNEVGYPGG-IFNPLNFAPT-------------DXAKEXGACHGRLAMXAFLGF 683 K W+P + P +L+GSLPGD GFDPLGL +DP LKWY +AEL++ RWAML V+G+ + + +T I W++AG A S TL + +L +VE +RW D +P S + + + +S + E GYPGG F+PL+ A T + K H RLAM A L F Sbjct: 57 KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLGIFVGQAWTGI------PWFEAGADPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFFDPLSLAGTISNGVYNPDTDKLERLKLAEIKHARLAMLAMLIF 245 The following BLAST results are available for this feature:
BLAST of EY756035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >EY756035 ID=EY756035; Name=EY756035; organism=Citrus sinensis; type=EST; length=929bpback to top |