EY755839
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 7.206e-70 Identity = 135/197 (68.53%), Postives = 166/197 (84.26%), Query Frame = -3 Query: 122 RXGGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 712 R GGA G +M A+ A YA AL D+AK+N TLE T+AD+EKIEKI ++ + FFV+P + EKKRE+VDEI SS++QP NFLNIL+D KRV+++K+IVKEFE+VYN +T+TE+AVV+SVVKLES+HLAQIAK VQ+LTG+KNVRIKTVID SLVAGFTIRYG G KLIDMSVKKQLE+IAAQL++GD+QLAV Sbjct: 52 RGGGAAGSKMVASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIKTVIDESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLEIGDIQLAV 248
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2) HSP 1 Score: 256.144 bits (653), Expect = 1.962e-67 Identity = 140/253 (55.34%), Postives = 185/253 (73.12%), Query Frame = -3 Query: 122 SLAKRCSDQIRVSSEKGVF*QPEPFQXNQTXPXXRGASRNPL------SANIPSGPRXGGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 862 +L R + + S P+PF + + A+ NPL ++ + + PR GGA G RM + A+ YA AL D+A TLE+T++DVEK+ +IFSE+ ++ FF NP I I+ KR ++DEI +S LQP T NF+NILID++R+++VK+I+ EFE+V+NK+T TE+AVV+SVVKLE++HLAQIAK VQK+TGAKNVRIKTVIDPSLVAGFTIRYG G KL+DMSVKKQLEEIAAQL++ DV LAV Sbjct: 9 ALQSRTTTAVAALSTSSTTSTPKPFSLSFSSST---ATFNPLRLKILTASKLTAKPR-GGALGTRMVDSTASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLEMDDVTLAV 257
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.115e-65 Identity = 121/195 (62.05%), Postives = 158/195 (81.03%), Query Frame = -3 Query: 122 GGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 706 GGA G RMS+ A YA AL DLA +NNTL++ +AD +KIE++FS+ ++ ++F +P ++ KR+++ E +S QP T NFLN+LID+KR+D++ DI+KEFE VYN +T+TE+ VV+SVVKLES HLAQIAKQVQKLTGAK VR KT++DPSLVAGFT+RYG G K IDMSVK++LEEIAAQ+DLGD+QLAV Sbjct: 57 GGALGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTKTLLDPSLVAGFTVRYGNTGSKFIDMSVKRKLEEIAAQIDLGDIQLAV 251
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 4.392e-51 Identity = 107/222 (48.20%), Postives = 151/222 (68.02%), Query Frame = -3 Query: 122 TXPXXRGASRNPLSANIPS----GPRXGGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 775 T R AS + +PS PR G + A YA AL ++A N TLE T +D+EK++KIF+++ + EFF NPT+ E+K ++DEI KS LQP NF+N+++D R ++ +IV EFE ++N +T TE+A V+SVV+LES+ LAQIA+ VQK+TGAKNVR+KT +DP L+AGFT++YG+ G LIDMSV+KQ+EEI ++ +L DV L V Sbjct: 26 TPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVATVTSVVQLESQDLAQIAQHVQKMTGAKNVRLKTQLDPELIAGFTVQYGRDGSSLIDMSVRKQIEEITSEFELPDVPLEV 247
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.017e-31 Identity = 79/212 (37.26%), Postives = 127/212 (59.91%), Query Frame = -3 Query: 149 LSANIPSGPRXGGAHGIRMSAT--------------VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 739 L+A +GPR A +R + V+ YA ALV+LA LE+ ADV+ + + E ++ +NP ++ +KKR ++ +I K + Q T N+LN+L++ R+ +V +I + FE++Y +MT+T++A + S VKLE E IAK++Q+LTG+KN+++K VID SL+AGF + YG ID+SV+ Q+E +A QL Sbjct: 2 LAAKSIAGPRAFKASAVRAAPKAGRRTVVVMARKNEVSESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVIDSSLIAGFVVEYGS---SQIDLSVRGQIERVADQL 210
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_EMIHU (ATP synthase subunit delta, chloroplastic OS=Emiliania huxleyi GN=atpD PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.236e-20 Identity = 57/176 (32.39%), Postives = 104/176 (59.09%), Query Frame = -3 Query: 149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673 +A YA AL++LA AN++L+ T+ D+ + + + + +F NP I + K+ ++ ++ + T FL +L+D R+ + I +F E+ K + E+A V+S V+L ++ IA++++K+TGAK +++ +DP L+ GFTI G KLID S++ QL++I+ L Sbjct: 6 IAVPYAEALLELANANSSLKETTNDINIVSQFLANSSDLKKFLGNPLITRDAKKGVLKDVL-GEQIGEKTLTFLMLLVDRGRIAYLDGIAYKFLELSYKEESIEIAKVTSSVQLSAQQQKTIAEKLKKITGAKQIKLALKVDPQLIGGFTIEIGS---KLIDTSIRGQLKQISTLL 177
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PORYE (ATP synthase subunit delta, chloroplastic OS=Porphyra yezoensis GN=atpD PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.524e-19 Identity = 53/178 (29.78%), Postives = 103/178 (57.87%), Query Frame = -3 Query: 143 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDL 673 +A YA+AL+DLAK E S D++ I+ I ++ ++ F NP +E K+E++ + T +FL IL+D KR+ ++ I ++ E+ +M + +A +++ + L + + ++++ +T AK V++ ++P L+ GFTI+ G K+ID S++ QL ++A+ LD+ Sbjct: 10 IAQPYAVALLDLAKTKKVTEKVSQDIQSIQNILAQSDKLKIFLANPLKTVEAKKEVIIATV-GDQINENTLSFLMILVDRKRIGMLDAIASKYLELAYQMESLTIANINTSIALSPDQETLLTEKIKVMTKAKEVKLIISVEPELIGGFTIQIGS---KVIDTSIRGQLRQMASHLDV 183
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CYAP7 (ATP synthase subunit delta OS=Cyanothece sp. (strain PCC 7424) GN=atpH PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19 Identity = 55/188 (29.26%), Postives = 102/188 (54.26%), Query Frame = -3 Query: 134 GIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDV 694 G +S +A YA AL+ ++++NN E D+ + + + ++ EF NP I E K+E++ I P NFL +L+D +R+ ++ + +++ + ++TNT +A V S +L E + +V+ ++GA+ V +K I+P L+ G I+ G +++D S++ QL I+ L LG V Sbjct: 3 GSSLSLEIAEPYAQALMSVSQSNNLTERFGEDIRSLLDLLNNSPELREFLSNPVIREENKKEILQRIMGDQT-HPYLRNFLMLLVDKRRIAFLEQVCEQYLALLRQLTNTVLAEVVSATELNDEQRQSVIDKVKTISGAQAVELKASINPDLIGGVIIKIGS---QILDASIRGQLRRIS--LSLGGV 184
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_OCHNE (ATP synthase subunit delta, chloroplastic OS=Ochrosphaera neapolitana GN=atpD PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 53/175 (30.29%), Postives = 104/175 (59.43%), Query Frame = -3 Query: 158 ATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIA 679 A +A YA AL++LA +N +L+ T+ D+ + + + + +F NP I E+K+ ++ ++ + ++ NFL +L++ RV + I ++F E+ K E+A V+S V L ++ ++A +++ +TGAK +++ ++P L+ GFT+ G KLID S++ QL++I+ Sbjct: 4 AKIADAYAEALLELANSNKSLKETTNDMNIVSQFLANSSDLKKFLGNPLITRERKKNVLKDVL-GEQISSVSLNFLMLLVNRGRVAFLDKIAQKFLELSYKQDAIEIAKVTSSVALSAQQQKELAGKLKLITGAKKIKLALRVEPKLIGGFTVEIGS---KLIDTSIRGQLKKIS 174
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_GALSU (ATP synthase subunit delta, chloroplastic OS=Galdieria sulphuraria GN=atpD PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19 Identity = 53/170 (31.18%), Postives = 98/170 (57.65%), Query Frame = -3 Query: 167 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLE 673 +A YA L ++A N+L + + I+ + + + + F VNP I + K+ + +I ++ L +T NFL ILI+ +R+ DIV +F ++NK TNT + ++SV+ L + + +++++T A +++K IDPSL+ G I++G LID+S+K +L+ Sbjct: 7 IAKVYAEGLFEIANTKNSLAEINEQLNSIKSVLKQMPEFYYFLVNPLISQQIKKNTI-KIVFNNNLDKITLNFLLILIERRRIIYFYDIVDQFILIWNKATNTSVVEIASVISLTEKQQQYLINKLKEITKANYIKLKLKIDPSLIGGLIIKFGS---NLIDLSLKGKLK 172 The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bpback to top |