EY755839

Overview
NameEY755839
Unique NameEY755839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_TOBAC (ATP synthase delta chain, chloroplastic OS=Nicotiana tabacum GN=ATPD PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 7.206e-70
Identity = 135/197 (68.53%), Postives = 166/197 (84.26%), Query Frame = -3
Query:  122 RXGGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 712
            R GGA G +M A+ A  YA AL D+AK+N TLE T+AD+EKIEKI  ++ +  FFV+P +  EKKRE+VDEI  SS++QP   NFLNIL+D KRV+++K+IVKEFE+VYN +T+TE+AVV+SVVKLES+HLAQIAK VQ+LTG+KNVRIKTVID SLVAGFTIRYG  G KLIDMSVKKQLE+IAAQL++GD+QLAV
Sbjct:   52 RGGGAAGSKMVASAAGSYANALADIAKSNGTLEQTTADLEKIEKISDDEAVFNFFVSPIVGEEKKRELVDEIVSSSSIQPHVANFLNILVDMKRVELIKEIVKEFEKVYNTLTDTELAVVTSVVKLESQHLAQIAKGVQRLTGSKNVRIKTVIDESLVAGFTIRYGNSGSKLIDMSVKKQLEDIAAQLEIGDIQLAV 248          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SPIOL (ATP synthase delta chain, chloroplastic OS=Spinacia oleracea GN=ATPD PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.962e-67
Identity = 140/253 (55.34%), Postives = 185/253 (73.12%), Query Frame = -3
Query:  122 SLAKRCSDQIRVSSEKGVF*QPEPFQXNQTXPXXRGASRNPL------SANIPSGPRXGGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 862
            +L  R +  +   S       P+PF  + +      A+ NPL      ++ + + PR GGA G RM  + A+ YA AL D+A    TLE+T++DVEK+ +IFSE+ ++ FF NP I I+ KR ++DEI  +S LQP T NF+NILID++R+++VK+I+ EFE+V+NK+T TE+AVV+SVVKLE++HLAQIAK VQK+TGAKNVRIKTVIDPSLVAGFTIRYG  G KL+DMSVKKQLEEIAAQL++ DV LAV
Sbjct:    9 ALQSRTTTAVAALSTSSTTSTPKPFSLSFSSST---ATFNPLRLKILTASKLTAKPR-GGALGTRMVDSTASRYASALADVADVTGTLEATNSDVEKLIRIFSEEPVYYFFANPVISIDNKRSVLDEIITTSGLQPHTANFINILIDSERINLVKEILNEFEDVFNKITGTEVAVVTSVVKLENDHLAQIAKGVQKITGAKNVRIKTVIDPSLVAGFTIRYGNEGSKLVDMSVKKQLEEIAAQLEMDDVTLAV 257          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PEA (ATP synthase delta chain, chloroplastic OS=Pisum sativum GN=ATPD PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 9.115e-65
Identity = 121/195 (62.05%), Postives = 158/195 (81.03%), Query Frame = -3
Query:  122 GGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 706
            GGA G RMS+  A  YA AL DLA +NNTL++ +AD +KIE++FS+ ++ ++F +P ++   KR+++ E   +S  QP T NFLN+LID+KR+D++ DI+KEFE VYN +T+TE+ VV+SVVKLES HLAQIAKQVQKLTGAK VR KT++DPSLVAGFT+RYG  G K IDMSVK++LEEIAAQ+DLGD+QLAV
Sbjct:   57 GGALGARMSSLAAGSYAAALADLANSNNTLDAITADFDKIEQLFSDPKVFDYFSSPIVEDSTKRQLIGEFATTSGFQPHTHNFLNVLIDSKRIDMIIDIIKEFEFVYNTLTDTELVVVTSVVKLESHHLAQIAKQVQKLTGAKKVRTKTLLDPSLVAGFTVRYGNTGSKFIDMSVKRKLEEIAAQIDLGDIQLAV 251          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_SORBI (ATP synthase delta chain, chloroplastic OS=Sorghum bicolor GN=ATPD PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.392e-51
Identity = 107/222 (48.20%), Postives = 151/222 (68.02%), Query Frame = -3
Query:  122 TXPXXRGASRNPLSANIPS----GPRXGGAHGIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDVQLAV 775
            T    R AS    +  +PS     PR  G      +   A  YA AL ++A  N TLE T +D+EK++KIF+++ + EFF NPT+  E+K  ++DEI KS  LQP   NF+N+++D  R  ++ +IV EFE ++N +T TE+A V+SVV+LES+ LAQIA+ VQK+TGAKNVR+KT +DP L+AGFT++YG+ G  LIDMSV+KQ+EEI ++ +L DV L V
Sbjct:   26 TPAAPRSASFARAARGLPSLRLAPPRRRGDLVRPRAEAAADSYASALSEVAVENGTLEQTVSDLEKLQKIFADETVAEFFDNPTVPREEKTALIDEIAKSYELQPHVVNFINVVVDNFRATILPEIVVEFENIFNSLTGTEVATVTSVVQLESQDLAQIAQHVQKMTGAKNVRLKTQLDPELIAGFTVQYGRDGSSLIDMSVRKQIEEITSEFELPDVPLEV 247          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CHLRE (ATP synthase delta chain, chloroplastic OS=Chlamydomonas reinhardtii GN=ATPD PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.017e-31
Identity = 79/212 (37.26%), Postives = 127/212 (59.91%), Query Frame = -3
Query:  149 LSANIPSGPRXGGAHGIRMSAT--------------VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 739
            L+A   +GPR   A  +R +                V+  YA ALV+LA     LE+  ADV+ +  +  E  ++    +NP ++ +KKR ++ +I K +  Q  T N+LN+L++  R+ +V +I + FE++Y +MT+T++A + S VKLE E    IAK++Q+LTG+KN+++K VID SL+AGF + YG      ID+SV+ Q+E +A QL
Sbjct:    2 LAAKSIAGPRAFKASAVRAAPKAGRRTVVVMARKNEVSESYAKALVELADEKGKLEAVHADVDAVAGLMKENAKLSALIMNPVVESDKKRAVLAKIAKEAGFQQYTINWLNLLVEKDRLSLVPEICECFEDLYCQMTDTQVATLRSAVKLEQEQQFLIAKKLQELTGSKNIKLKPVIDSSLIAGFVVEYGS---SQIDLSVRGQIERVADQL 210          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_EMIHU (ATP synthase subunit delta, chloroplastic OS=Emiliania huxleyi GN=atpD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.236e-20
Identity = 57/176 (32.39%), Postives = 104/176 (59.09%), Query Frame = -3
Query:  149 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQL 673
            +A  YA AL++LA AN++L+ T+ D+  + +  +    + +F  NP I  + K+ ++ ++     +   T  FL +L+D  R+  +  I  +F E+  K  + E+A V+S V+L ++    IA++++K+TGAK +++   +DP L+ GFTI  G    KLID S++ QL++I+  L
Sbjct:    6 IAVPYAEALLELANANSSLKETTNDINIVSQFLANSSDLKKFLGNPLITRDAKKGVLKDVL-GEQIGEKTLTFLMLLVDRGRIAYLDGIAYKFLELSYKEESIEIAKVTSSVQLSAQQQKTIAEKLKKITGAKQIKLALKVDPQLIGGFTIEIGS---KLIDTSIRGQLKQISTLL 177          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_PORYE (ATP synthase subunit delta, chloroplastic OS=Porphyra yezoensis GN=atpD PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.524e-19
Identity = 53/178 (29.78%), Postives = 103/178 (57.87%), Query Frame = -3
Query:  143 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDL 673
            +A  YA+AL+DLAK     E  S D++ I+ I ++  ++  F  NP   +E K+E++        +   T +FL IL+D KR+ ++  I  ++ E+  +M +  +A +++ + L  +    + ++++ +T AK V++   ++P L+ GFTI+ G    K+ID S++ QL ++A+ LD+
Sbjct:   10 IAQPYAVALLDLAKTKKVTEKVSQDIQSIQNILAQSDKLKIFLANPLKTVEAKKEVIIATV-GDQINENTLSFLMILVDRKRIGMLDAIASKYLELAYQMESLTIANINTSIALSPDQETLLTEKIKVMTKAKEVKLIISVEPELIGGFTIQIGS---KVIDTSIRGQLRQMASHLDV 183          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_CYAP7 (ATP synthase subunit delta OS=Cyanothece sp. (strain PCC 7424) GN=atpH PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.789e-19
Identity = 55/188 (29.26%), Postives = 102/188 (54.26%), Query Frame = -3
Query:  134 GIRMSATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIAAQLDLGDV 694
            G  +S  +A  YA AL+ ++++NN  E    D+  +  + +   ++ EF  NP I  E K+E++  I       P   NFL +L+D +R+  ++ + +++  +  ++TNT +A V S  +L  E    +  +V+ ++GA+ V +K  I+P L+ G  I+ G    +++D S++ QL  I+  L LG V
Sbjct:    3 GSSLSLEIAEPYAQALMSVSQSNNLTERFGEDIRSLLDLLNNSPELREFLSNPVIREENKKEILQRIMGDQT-HPYLRNFLMLLVDKRRIAFLEQVCEQYLALLRQLTNTVLAEVVSATELNDEQRQSVIDKVKTISGAQAVELKASINPDLIGGVIIKIGS---QILDASIRGQLRRIS--LSLGGV 184          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_OCHNE (ATP synthase subunit delta, chloroplastic OS=Ochrosphaera neapolitana GN=atpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 53/175 (30.29%), Postives = 104/175 (59.43%), Query Frame = -3
Query:  158 ATVATXYAIALVDLAKANNTLESTSADVEKIEKIFSEKQ-IHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLEEIA 679
            A +A  YA AL++LA +N +L+ T+ D+  + +  +    + +F  NP I  E+K+ ++ ++     +  ++ NFL +L++  RV  +  I ++F E+  K    E+A V+S V L ++   ++A +++ +TGAK +++   ++P L+ GFT+  G    KLID S++ QL++I+
Sbjct:    4 AKIADAYAEALLELANSNKSLKETTNDMNIVSQFLANSSDLKKFLGNPLITRERKKNVLKDVL-GEQISSVSLNFLMLLVNRGRVAFLDKIAQKFLELSYKQDAIEIAKVTSSVALSAQQQKELAGKLKLITGAKKIKLALRVEPKLIGGFTVEIGS---KLIDTSIRGQLKKIS 174          
BLAST of EY755839 vs. ExPASy Swiss-Prot
Match: ATPD_GALSU (ATP synthase subunit delta, chloroplastic OS=Galdieria sulphuraria GN=atpD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.875e-19
Identity = 53/170 (31.18%), Postives = 98/170 (57.65%), Query Frame = -3
Query:  167 VATXYAIALVDLAKANNTLESTSADVEKIEKIFSEK-QIHEFFVNPTIDIEKKREMVDEICKSSALQPLTGNFLNILIDAKRVDVVKDIVKEFEEVYNKMTNTEMAVVSSVVKLESEHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGKWGFKLIDMSVKKQLE 673
            +A  YA  L ++A   N+L   +  +  I+ +  +  + + F VNP I  + K+  + +I  ++ L  +T NFL ILI+ +R+    DIV +F  ++NK TNT +  ++SV+ L  +    +  +++++T A  +++K  IDPSL+ G  I++G     LID+S+K +L+
Sbjct:    7 IAKVYAEGLFEIANTKNSLAEINEQLNSIKSVLKQMPEFYYFLVNPLISQQIKKNTI-KIVFNNNLDKITLNFLLILIERRRIIYFYDIVDQFILIWNKATNTSVVEIASVISLTEKQQQYLINKLKEITKANYIKLKLKIDPSLIGGLIIKFGS---NLIDLSLKGKLK 172          
The following BLAST results are available for this feature:
BLAST of EY755839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
ATPD_TOBAC7.206e-7068.53ATP synthase delta chain, chloroplastic OS=Nicotia... [more]
ATPD_SPIOL1.962e-6755.34ATP synthase delta chain, chloroplastic OS=Spinaci... [more]
ATPD_PEA9.115e-6562.05ATP synthase delta chain, chloroplastic OS=Pisum s... [more]
ATPD_SORBI4.392e-5148.20ATP synthase delta chain, chloroplastic OS=Sorghum... [more]
ATPD_CHLRE1.017e-3137.26ATP synthase delta chain, chloroplastic OS=Chlamyd... [more]
ATPD_EMIHU5.236e-2032.39ATP synthase subunit delta, chloroplastic OS=Emili... [more]
ATPD_PORYE1.524e-1929.78ATP synthase subunit delta, chloroplastic OS=Porph... [more]
ATPD_CYAP75.789e-1929.26ATP synthase subunit delta OS=Cyanothece sp. (stra... [more]
ATPD_OCHNE9.875e-1930.29ATP synthase subunit delta, chloroplastic OS=Ochro... [more]
ATPD_GALSU9.875e-1931.18ATP synthase subunit delta, chloroplastic OS=Galdi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-001-D11-CT.R Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755839 ID=EY755839; Name=EY755839; organism=Citrus sinensis; type=EST; length=909bp
TTTTTTTTTTTTTTTTTTTTCCTTAACAAATAAAAATGTTTTACAAACAA
ACTTCAATCAAATTATACAAAACCAAATTCAGAAAACGAAAAAAAAAAAA
ATTCCTTCAAAAATCATATCATACAGCAAGTTGGACATCACCCAAATCAA
GCTGAGCAGCGATCTCCTCCAACTGTTTCTTGACACTCATATCAATCAAC
TTAAACCCCCACTTCCCATACCGGATCGTAAAACCCGCCACCAAGCTCGG
GTCAATCACGGTCTTTATCCTCACATTCTTGGCCCCAGTCAACTTCTGGA
CTTGCTTCGCTATCTGAGCCAAATGCTCCGACTCCAGCTTCACCACCGAG
CTCACCACCGCCATCTCCGTATTCGTCATCTTATTATACACCTCCTCGAA
CTCCTTCACTATGTCCTTCACCACGTCCACCCTCTTCGCGTCGATCAGTA
TGTTCAAGAAATTCCCGGTCAGCGGCTGCAGCGCCGACGACTTGCATATC
TCGTCCACCATCTCTCTTTTCTTCTCGATATCGATGGTGGGGTTCACGAA
GAACTCATGGATTTGTTTCTCGCTGAAGATTTTCTCGATCTTTTCCACGT
CGGCGCTCGTGGACTCGAGGGTGTTGTTCGCTTTCGCCAAGTCCACCAGC
GCGATGGCGTANCTGGTCGCCACTGTGGCTGACATTCTGATTCCGTGGGC
GCCCCCCCNGCGTGGGCCGGAAGGGATGTTGGCCGATAATGGGTTTCGAG
AGGCCCCCCGNNCGNAGGGAANAGTTTGATTGNATTGAAAGGGTTCCGGT
TGCTAAAAAACCCCCTTTTCCGATGAAACCCTTATCTGATCTGAGCAACG
CTTAGCTAAGCTGCTCTTTGCTGCCCAAAAAGAGCCGAAGAAAGAGTATC
AAGACGGGG
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