EY755686

Overview
NameEY755686
Unique NameEY755686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length597
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755686_ssr494 microsatellite EY755686_ssr494:494..517. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7267 contig Csv1_Contig7267:338..935. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY755686 vs. ExPASy Swiss-Prot
Match: PRU1_PRUAR (Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.636e-12
Identity = 34/54 (62.96%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:   67 ASPNGGSICKTICKLHAKGEVEVTEEQAKAGKERVLGVVKGVEAYLQANPDVCN 228
            ASP+GGSI KT    H KG+VE+ EEQ KAGKE+  G+ K VEAYL ANPD  N
Sbjct:  107 ASPDGGSIVKTTSHYHTKGDVEIKEEQVKAGKEKAAGLFKLVEAYLLANPDAYN 160
The following BLAST results are available for this feature:
BLAST of EY755686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PRU1_PRUAR9.636e-1262.96Major allergen Pru ar 1 OS=Prunus armeniaca PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-031-D08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755686 ID=EY755686; Name=EY755686; organism=Citrus sinensis; type=EST; length=597bp
CGTGATTGATAGGAATGATTTGGCGGATTACAAGTTGGAAAAAATTCCTT
TGAGCACCAATGGAGGGCATCTCCTAATGGAGGATCAATCTGCAAGACCA
TTTGCAAGCTCCACGCCAAAGGTGAGGTGGAGGTCACAGAAGAGCAAGCC
AAAGCTGGCAAAGAAAGAGTTCTCGGAGTCGTCAAGGGTGTCGAAGCCTA
TCTCCAGGCAAATCCTGATGTCTGCAATTAAGATATACGTTTTCTGCAAT
ATTATCAGCTGCTTCTTGCTTTCCGTATGTGTGCGCACTTGCTTTGCTTT
AATAAGCCGTGTGTTGTTGCATATTGTTCGGCCAAATTAAAGTGCTTCCT
TTATTTGAACTTGATAATAAGAACTAGCTTAGCCTGGAAGATTGATTATA
TAAGTGGCTTGTAATAAGAGCTTATTTCTGTCAATGCTTGCAGGTTTTCC
TGAGTGAACTTTTCTCCAAGACTACTAAGTCTCGGGTTTTTTTTGTGTGT
GTGTGTGTGTGTGTGTGTCAATGTACTCTCAGAATGGTTCGTGCTTTGTA
ATGTCCTATGAATTGAGAAGTTGAATGTTAAAAAAAAAAAAAAAAAA
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