EY755683

Overview
NameEY755683
Unique NameEY755683
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13269 contig Csv1_Contig13269:1..826. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY755683 vs. ExPASy Swiss-Prot
Match: CCA1_ARATH (Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.303e-24
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 3 
Query:  492 SCGNDFAPKPRKPYTITKQRERWTEEEHKKFLEALKLFVRAWRKIEEHVGTKTAVQIRSHAQKFFSRL 695
            S G D   K RKPYTITKQRERWTEEEH +F+EAL+L+ RAW+KIEEHV TKTAVQIRSHAQKFFS++
Sbjct:    5 SSGEDLVIKTRKPYTITKQRERWTEEEHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKV 72
[Close]
BLAST of EY755683 vs. ExPASy Swiss-Prot
Match: LHY_ARATH (Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.929e-24
Identity = 50/71 (70.42%), Postives = 62/71 (87.32%), Query Frame = 3 
Query:  483 DQFSCGNDFAPKPRKPYTITKQRERWTEEEHKKFLEALKLFVRAWRKIEEHVGTKTAVQIRSHAQKFFSRL 695
            D  + G +   K RKPYTITKQRERWTE+EH++FLEAL+L+ RAW++IEEH+GTKTAVQIRSHAQKFF++L
Sbjct:    2 DTNTSGEELLAKARKPYTITKQRERWTEDEHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKL 72
[Close]
BLAST of EY755683 vs. ExPASy Swiss-Prot
Match: MYBG_DICDI (Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.107e-18
Identity = 42/60 (70.00%), Postives = 51/60 (85.00%), Query Frame = 3 
Query:  516 KPRKPYTITKQRERWTEEEHKKFLEALKLFVRAWRKIEEHVGTKTAVQIRSHAQKFFSRL 695
            K RKPYTI+KQRE WT+EEH+KFLEAL LF R W+KIE  VG+KT +QIRSHAQK+F ++
Sbjct:   30 KSRKPYTISKQRENWTDEEHQKFLEALTLFDRDWKKIESFVGSKTVIQIRSHAQKYFIKV 89
The following BLAST results are available for this feature:
BLAST of EY755683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CCA1_ARATH2.303e-2476.47Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 ... [more]
LHY_ARATH3.929e-2470.42Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV... [more]
MYBG_DICDI1.107e-1870.00Myb-like protein G OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-031-D04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755683 ID=EY755683; Name=EY755683; organism=Citrus sinensis; type=EST; length=825bp
TTTTCCCTTTTTTGACAAANAGGAAGTGTCATTTCTGTTTGTTTGAGCTA
CATAGAATTGGTAGATTTTGAGGGAAAAAAAAGAAAAAAGAAGAAAGGAG
TATGAGCTTTAATTTATGTATGGTGATTTTGATTGCGGAGAAGTCGAAGA
CAGCGGGAACTGCTGTTATTGCGGAGAGTGTTGATTCCTGAGGCAATATT
TAATCTTGAGAAGAGAAGGAGATCTTGCTTAGTTACAAGAATATGGCTGT
TCAAGAACGTGTGAACTGAGAAGGAACTTTTGTGTGTGATCTGAGAAAGA
ATATTGTTATTCTGATGAAGAAAACTTTTATCATTAACTTTTGAAATGGG
CTAATTTTTTTATGCCCCTTTTGTTTTCTATAGGACGAATGTGGAGGTAA
TCATTCAAATTCGGTTTTCTCGGCTGGCAATGGAATTGAATCAAGTTCTG
GCCTGCATACTGTAACTGGTCTTGAAGTAAAGGATCAGTTTTCTTGTGGG
AACGATTTTGCTCCCAAGCCAAGAAAACCATACACAATCACAAAGCAAAG
AGAAAGATGGACGGAAGAAGAGCATAAGAAATTCCTTGAAGCTCTAAAGC
TGTTTGTTCGAGCGTGGCGGAAGATAGAGGAACATGTGGGCACAAAGACT
GCAGTGCAGATACGAAGCCATGCTCAGAAATTCTTTTCTAGGTTGTCCGC
GAGTCAAATGGCTGCANCACAAGCCCAGTGGAACCCGTCGAAATTCCTTC
TCCTCGACAAAACGAAAACTATGCACCCTTCCCTCGCAAATTGCCCACCA
CCTGTTAAAAAAGCCCTAATCAGAC
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