EY755618 | Citrus Genome Database

Overview


Name	EY755618
Unique Name	EY755618
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	871

Libraries


Library Name	Type
Sweet orange leaf, field plant A	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig10887	contig	Csv1_Contig10887:97..970.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 4.123e-118
Identity = 204/222 (91.89%), Postives = 212/222 (95.50%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSK 726
            MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVT KKVPDKLLD TSV+HLFPITKYLGLLATGMTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KWIADKSQVYTQHAYMRPLGVVAM+L IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAINFLEKKMKNDPAF+++ETVQTAIS LQSVLQEDFKASEIE  VV K
Sbjct:    1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKK 222

HSP 2 Score: 38.891 bits (89), Expect = 4.123e-118
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 3

Query:  720 EQXNPEFXVLSIEEIDEHLTAISERD 797
            ++ +P F VL+ EEIDEHLTAISERD
Sbjct:  221 KKEDPIFRVLTTEEIDEHLTAISERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2)

HSP 1 Score: 404.06 bits (1037), Expect = 7.020e-118
Identity = 200/222 (90.09%), Postives = 213/222 (95.95%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSK 726
            MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDS+CVVT KKVPDKLLD+TSVTHLFPITKYLGLLATGMTADARTLVQQAR EAAEFRF YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVL ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAINFLEKKMKNDP+FT++ETVQTAIS LQSVLQEDFKA+EIE  VV K
Sbjct:    1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRK 222

HSP 2 Score: 42.3578 bits (98), Expect = 7.020e-118
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            NPEF VL+ +EIDEHLTAISERD
Sbjct:  224 NPEFRVLTTDEIDEHLTAISERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2)

HSP 1 Score: 387.111 bits (993), Expect = 3.223e-112
Identity = 189/220 (85.91%), Postives = 206/220 (93.64%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVV 720
            MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK AG+TSIGVRGKDSVCVVT KKVPDKLLD +SVTHLFPITKY+GL+ATG+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKWIADKSQVYTQHAYMRPLGVVAMV+ +DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +P+FTF ETVQTAIS LQSVLQEDFKA+EIE  VV
Sbjct:    1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVV 220

HSP 2 Score: 40.4318 bits (93), Expect = 3.223e-112
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            NPEF  L+ EEI+EHLTAISERD
Sbjct:  224 NPEFRALTTEEIEEHLTAISERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1)

HSP 1 Score: 390.578 bits (1002), Expect = 9.342e-112
Identity = 192/220 (87.27%), Postives = 207/220 (94.09%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVV 720
            MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVKAAG+TSIGVRGKDSVCVVT KKVPDKLLD +SV+HLFP+TKYLGLLATGMTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVL IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLEKKMK +PAFT+ ETVQTAIS LQSVLQEDFKA+EIE  VV
Sbjct:    1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVV 220

HSP 2 Score: 35.4242 bits (80), Expect = 9.342e-112
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            +P F  L  EEIDEHLTAISERD
Sbjct:  224 DPLFRSLRTEEIDEHLTAISERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 2.275e-110
Identity = 193/222 (86.94%), Postives = 207/222 (93.24%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSK 726
            MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVK+AGVTSIGVRGKDSVCVVT KKVPDKLLDHTSVTHLFPITKY+GLLATG+TADAR+LV QAR EAAEFRFK+GYEMPVDVLAKWIADK+QVYTQHAYMRPLGVVAMVL  DEE   +LFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMK+DP F+++ETVQ AIS LQSVLQEDFKA+EIE  VV K
Sbjct:    1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRK 222

HSP 2 Score: 33.8834 bits (76), Expect = 2.275e-110
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3

Query:  738 FXVLSIEEIDEHLTAISERD 797
            F  L+ EEID+HLTAISERD
Sbjct:  227 FRALTTEEIDQHLTAISERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.412e-79
Identity = 141/229 (61.57%), Postives = 184/229 (80.35%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSKXIQNSXF 747
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VT KKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K    +TF++TV+TAI+ L +VL  DFK SEIE  VV+  ++N  F
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVT--VENPKF 227

HSP 2 Score: 32.3426 bits (72), Expect = 3.412e-79
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            NP+F +L+  EID HL A++ERD
Sbjct:  224 NPKFRILTEAEIDAHLVALAERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_MOUSE (Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.412e-79
Identity = 141/229 (61.57%), Postives = 184/229 (80.35%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSKXIQNSXF 747
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VT KKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K    +TF++TV+TAI+ L +VL  DFK SEIE  VV+  ++N  F
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVT--VENPKF 227

HSP 2 Score: 32.3426 bits (72), Expect = 3.412e-79
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            NP+F +L+  EID HL A++ERD
Sbjct:  224 NPKFRILTEAEIDAHLVALAERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.412e-79
Identity = 141/229 (61.57%), Postives = 184/229 (80.35%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSKXIQNSXF 747
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VT KKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K    +TF++TV+TAI+ L +VL  DFK SEIE  VV+  ++N  F
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVT--VENPKF 227

HSP 2 Score: 32.3426 bits (72), Expect = 3.412e-79
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            NP+F +L+  EID HL A++ERD
Sbjct:  224 NPKFRILTEAEIDAHLVALAERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.412e-79
Identity = 141/229 (61.57%), Postives = 184/229 (80.35%), Query Frame = 1

Query:   61 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEGCVVSKXIQNSXF 747
            MSRGS  G+DRHITIFSPEGRL+QVEYAFKA+   G+TS+ VRGKD   +VT KKVPDKLLD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD SQVYTQ+A MRPLG   +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLEKK+K    +TF++TV+TAI+ L +VL  DFK SEIE  VV+  ++N  F
Sbjct:    1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVT--VENPKF 227

HSP 2 Score: 32.3426 bits (72), Expect = 3.412e-79
Identity = 13/23 (56.52%), Postives = 18/23 (78.26%), Query Frame = 3

Query:  729 NPEFXVLSIEEIDEHLTAISERD 797
            NP+F +L+  EID HL A++ERD
Sbjct:  224 NPKFRILTEAEIDAHLVALAERD 246

[Close]

BLAST of EY755618 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 6.825e-65
Identity = 122/214 (57.01%), Postives = 157/214 (73.36%), Query Frame = 1

Query:   82 GYDRHITIFSPEGRLFQVEYAFKAVKAAGVTSIGVRGKDSVCVVTXKKVPDKLLDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP-AFTFQETVQTAISTLQSVLQEDFKASEIEGCVV 720
            G+DR IT+FSPEGRL+QVEYAFKA   AG+TS+GV GK+  CV++ KKVPDKL+D ++V H+FPITK +G + TG  ADAR  V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV   ++++D+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D       +TV+T I  L S L  DFK++E++  VV
Sbjct:    6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKHVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSLSTDFKSTELQIGVV 219

HSP 2 Score: 29.6462 bits (65), Expect = 6.825e-65
Identity = 12/20 (60.00%), Postives = 17/20 (85.00%), Query Frame = 3

Query:  738 FXVLSIEEIDEHLTAISERD 797
            F VLS+EEI+ HL +I+E+D
Sbjct:  225 FRVLSVEEIEAHLQSIAEKD 244

The following BLAST results are available for this feature:

BLAST of EY755618 vs. ExPASy Swiss-Prot

BLAST of EY755618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175


Match Name	E-value	Identity	Description
PSA6_TOBAC	4.123e-118	91.89	Proteasome subunit alpha type-6 OS=Nicotiana tabac...	[more]
PSA6_SOYBN	7.020e-118	90.09	Proteasome subunit alpha type-6 OS=Glycine max GN=...	[more]
PSA6A_ARATH	3.223e-112	85.91	Proteasome subunit alpha type-6-A OS=Arabidopsis t...	[more]
PSA6B_ARATH	9.342e-112	87.27	Proteasome subunit alpha type-6-B OS=Arabidopsis t...	[more]
PSA6_ORYSJ	2.275e-110	86.94	Proteasome subunit alpha type-6 OS=Oryza sativa su...	[more]
PSA6_RAT	3.412e-79	61.57	Proteasome subunit alpha type-6 OS=Rattus norvegic...	[more]
PSA6_MOUSE	3.412e-79	61.57	Proteasome subunit alpha type-6 OS=Mus musculus GN...	[more]
PSA6_HUMAN	3.412e-79	61.57	Proteasome subunit alpha type-6 OS=Homo sapiens GN...	[more]
PSA6_BOVIN	3.412e-79	61.57	Proteasome subunit alpha type-6 OS=Bos taurus GN=P...	[more]
PSA6_SCHPO	6.825e-65	57.01	Probable proteasome subunit alpha type-6 OS=Schizo...	[more]

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Properties


Property Name	Value
Genbank description	CS12-C1-001-030-F03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY755618 ID=EY755618; Name=EY755618; organism=Citrus sinensis; type=EST; length=871bp
AGTAGAACTGCGTGAAGAAGAAAATTGAAAGAGAGGAATCACTGTAGCGT
ATAATCAACAATGAGTAGAGGAAGTGGAGGAGGATACGATCGTCATATTA
CAATTTTTTCGCCTGAGGGTCGTCTCTTTCAAGTCGAGTATGCTTTCAAA
GCTGTTAAGGCTGCTGGGGTTACCTCTATTGGTGTTCGAGGAAAGGATTC
AGTCTGTGTTGTGACTCANAAGAAGGTCCCGGACAAGCTTTTGGATCATA
CAAGTGTCACACATCTTTTCCCAATCACAAAGTACCTTGGATTGCTGGCA
ACTGGAATGACAGCTGATGCAAGGACATTGGTTCAGCAGGCAAGATATGA
AGCCGCTGAGTTTCGCTTCAAATATGGATATGAAATGCCTGTGGATGTGT
TAGCCAAATGGATTGCAGACAAATCACAAGTATATACTCAACATGCTTAT
ATGAGACCACTTGGTGTAGTTGCTATGGTTTTGAGTATTGACGAAGAATG
TGGACCTCGCCTCTTTAAGTGTGACCCTGCTGGCCATTTCTTTGGCCACA
AGGCAACAAGTGCTGGATTGAAGGAGCAAGAGGCAATTAATTTCTTGGAG
AAGAAGATGAAGAATGATCCTGCGTTTACCTTTCAAGAAACTGTGCAGAC
TGCAATTTCCACCCTGCAATCAGTCCTGCAAGAGGATTTTAAGGCGAGTG
AAATTGAGGGTTGCGTGGTGAGCAAGANAATCCAGAATTCANAGTTTTGT
CCATCGAGGAGATCGATGAGCACTTGACTGCTATAAGTGAACGAGATTAG
GAGGGTGTTTCATGCCCAGTCACAAATGCTGAAACCAAAAACAAAATGCT
TTTCCCCTGTATCTTGAATTA