EY755613

Overview
NameEY755613
Unique NameEY755613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755613_ssr234 microsatellite EY755613_ssr234:234..248. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig9675 contig Csv1_Contig9675:24..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755613 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.699e-42
Identity = 102/177 (57.63%), Postives = 118/177 (66.67%), Query Frame = 2
Query:  143 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSHGGVAWFLGXXXXXXXXXXXXXFKGVSVESKSDGFMTSDAE*WNERFAMLGLVALAFTECVKGGTLV 649
            RS  NQ +++   Y+P+LRRNV+L VR  A             PT P A    PQP   + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ +  QLS GGVAWFLG             F+GVSVESKS   M+SDAE WN R AMLGLVALAFTE VKG +LV
Sbjct:   20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAFTEFVKGTSLV 196          
BLAST of EY755613 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.649e-29
Identity = 84/198 (42.42%), Postives = 112/198 (56.57%), Query Frame = 2
Query:   74 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAXXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSHGGVAWFLGXXXXXXXXXXXXXFKGVSVESKSDGFMTSDAE*WNERFAMLGLVALAFTECVKGGTLV 649
            MA+S    ++ A     + T I R G N L   K    LP +RRN   +VR                  T        P +  ++T  + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+ +GGV WFL              ++G+S E+K++GF  SDAE WN RFAM+GLVALAFTE VKGG L+
Sbjct:    1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAFTEYVKGGPLI 197          
BLAST of EY755613 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.597e-24
Identity = 65/131 (49.62%), Postives = 79/131 (60.31%), Query Frame = 2
Query:  263 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLS--HGGVAWFLGXXXXXXXXXXXXXFKGVSVESKSDGFMTSDAE*WNERFAMLGLVALAFTECVKGGTLV 649
            PT   A P+P  K + +    +  AFSGPAPERINGRLAM+GFVAAL VE ++G  +  Q+     G+AWFL               +G SVESKS G  ++DAE WN RFAMLGLVALA TE + G   V
Sbjct:  100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFV 229          
BLAST of EY755613 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.086e-24
Identity = 76/189 (40.21%), Postives = 98/189 (51.85%), Query Frame = 2
Query:   86 LATQSMLASPVAARVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAXXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSHG-GVAWFLGXXXXXXXXXXXXXFKGVSVESKSDGFMTSDAE*WNERFAMLGLVALAFTECVKGGTLV 649
            +AT   ++S   A V  + RS A+   + + LP+L R   L VR               P+ P     PP KP+ ST   +  AFSGPAPERINGRLAM+GFV AL VE  +G  + +QL  G G AWF                +G S E ++   M ++AE WN RFAMLGLVALA TE + G   +
Sbjct:    1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLGLVALAATEIITGAPFI 170          
BLAST of EY755613 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.069e-24
Identity = 58/117 (49.57%), Postives = 71/117 (60.68%), Query Frame = 2
Query:  290 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSHG-GVAWFLGXXXXXXXXXXXXXFKGVSVESKSDGFMTSDAE*WNERFAMLGLVALAFTECVKG 637
            PP KP+ ST   +  AFSGPAPERINGRLAM+GFV AL VE  +G  + +QL  G G AWF                +G S E ++   M ++AE WN RFAM+GLVALA TE + G
Sbjct:   45 PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIGLVALAATEIITG 161          
The following BLAST results are available for this feature:
BLAST of EY755613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ELI_PEA1.699e-4257.63Early light-induced protein, chloroplastic OS=Pisu... [more]
DS22_CRAPL1.649e-2942.42Desiccation stress protein DSP-22, chloroplastic O... [more]
ELI5_HORVU1.597e-2449.62High molecular mass early light-inducible protein ... [more]
ELI9_HORVU2.086e-2440.21Low molecular mass early light-inducible protein H... [more]
ELI6_HORVU6.069e-2449.57Low molecular mass early light-inducible protein H... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-030-E09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755613 ID=EY755613; Name=EY755613; organism=Citrus sinensis; type=EST; length=780bp
CAAGAAACTTTCCGACCTGAAGCACCCAATTCCCGCTTATACTTTGTTCT
GTTTTCTACTTCATAAATTAAAAATGGCCGCATCACTTGCTACTCAATCT
ATGCTGGCAAGTCCTGTAGCAGCTCGTGTGACTGGTATCAGGAGATCCGG
GGCAAACCAACTTTCCTCCGTCAAGTACTTGCCTAGTCTGCGTAGAAATG
TCAACTTATCCGTGCGCTGCACGGCAGAGGATGAGCAGCAGCAGCAGCAG
AAAGATGATCAACCAACCATACCGAAAGCTGAGCCTCAGCCACCAAAGAA
GCCGCGGATGAGCACGGGGTTCTCTGAGGTGTTCGCGTTCAGCGGGCCGG
CACCGGAGAGGATAAACGGGAGGCTTGCGATGATTGGGTTCGTGGCTGCA
TTGGGGGTGGAGATATCCAAGGGTCAGGATGTGTTTGCCCAGTTATCACA
CGGTGGGGTTGCCTGGTTCTTGGGGACCAGTGTTTTGCTCACGGTTGCGT
CCCTGGTTGCTTTGTTTAAAGGTGTCAGCGTGGAGTCTAAATCGGATGGG
TTCATGACTTCAGATGCTGAGTAGTGGAATGAGAGGTTTGCTATGCTGGG
CCTTGTTGCTTTGGCTTTCACCGAGTGTGTTAAGGGTGGCACCCTTGTTT
AAGCTTAATCTTGTGTAGATCTGTAGATCTGTATCTTTTCTAACTAATTA
ATGTATGAGATCCTACTGTAATTAAATCTCTATTACTCATGCCATTCTGT
AATTCAACCACCAAAAAAAAAAACTAAAAA
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