EY730712

Overview
NameEY730712
Unique NameEY730712
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length595
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY730712 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18
Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 1
Query:   22 QYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIXXXXXXXXXXXXXXXXXILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 339
            QY LIG AEVF  +G LEF Y++APDAM+S+                 +L +++  +T   K G+P W+  N+N G  DY ++LLA LS +NF  +L+ + RYKY+
Sbjct:  460 QYLLIGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVALGNYLSTVLVTVVMKIT--KKNGKPGWIPDNLNRGHLDYFFYLLATLSFLNFLVYLWISKRYKYK 563          
BLAST of EY730712 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   22 QYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIXXXXXXXXXXXXXXXXXILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKH 354
            QY L+G AEVF  +G LEF Y++APDAM+S+                  L +++  VT +   G+P W+A+N+N G  DY +WLLA LS +NF  +L+ A  Y Y+    H
Sbjct:  460 QYFLVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTAIAFGNYLSTFLVTLVTKVTRSG--GRPGWIAKNLNNGHLDYFFWLLAGLSFLNFLVYLWIAKWYTYKKTTGH 568          
BLAST of EY730712 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.738e-16
Identity = 38/106 (35.85%), Postives = 62/106 (58.49%), Query Frame = 1
Query:   22 QYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIXXXXXXXXXXXXXXXXXILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYR 339
            QY ++G AEVF  +G LEF Y+++PDAM+S+                 ++ +++   T   + GQ  W++ N+N+G  DY +WLLA LS++N   + +SA RYK +
Sbjct:  478 QYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFT--TRNGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQK 581          
BLAST of EY730712 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.868e-13
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = 1
Query:   13 LLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIXXXXXXXXXXXXXXXXXILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGNDYEVMENKLYDS 396
            LL QY L+G+A+ F  +  LEF Y++AP++MKS+                 IL S +  +T   KK    W+  N+N  R D  Y   AVL+++NF  FL     Y+YR++     + E  E  + D+
Sbjct:  459 LLPQYVLMGLADAFIEIAKLEFFYDQAPESMKSLGTSYTSTSMAVGYFMSSILLSSVSQIT---KKQGRGWIQNNLNESRLDNYYMFFAVLNLLNFILFLVVIRFYEYRADVTQSANVEQKEPNMVDN 583          
BLAST of EY730712 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.051e-13
Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 1
Query:   13 LLIQYCLIGIAEVFCIVGLLEFLYEEAPDAMKSIXXXXXXXXXXXXXXXXXILNSIIKSVTGNPKKGQPNWLAQNINTGRFDYLYWLLAVLSVINFCAFLYSAYRYKYRSEQKHGNDYEVMENK 384
            LL Q+ L+G+A+ F  V  LEF Y++AP++MKS+                  L S +  +T   KK    W+  N+N  R DY Y   AVL+++NF  FL     Y YR+E     D + +E K
Sbjct:  459 LLPQFVLMGMADSFLEVAKLEFFYDQAPESMKSLGTSYSTTSLAIGNFMSSFLLSTVSEIT---KKRGRGWILNNLNESRLDYYYLFFAVLNLVNFVLFLVVVKFYVYRAEVTDSVDVKEVEMK 579          
The following BLAST results are available for this feature:
BLAST of EY730712 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PTR1_ARATH1.792e-1840.57Peptide transporter PTR1 OS=Arabidopsis thaliana G... [more]
PTR5_ARATH8.896e-1839.64Peptide transporter PTR5 OS=Arabidopsis thaliana G... [more]
PTR2_ARATH3.738e-1635.85Peptide transporter PTR2 OS=Arabidopsis thaliana G... [more]
PTR3B_ARATH3.868e-1332.81Peptide transporter PTR3-B OS=Arabidopsis thaliana... [more]
PTR3A_ARATH5.051e-1334.68Peptide transporter PTR3-A OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-033-F12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY730712 ID=EY730712; Name=EY730712; organism=Citrus sinensis; type=EST; length=595bp
CACGCGTCCGGGCTCTTGATTCAGTATTGTCTGATTGGCATTGCTGAAGT
ATTTTGCATAGTAGGCTTACTTGAATTTCTCTACGAGGAAGCCCCGGATG
CAATGAAGAGTATAGGGTCTGCTTATGCAGCTTTAGCGGGGGGTTTAGGT
TGCTTTGCTGCTTCTATATTGAACAGCATCATCAAGTCTGTAACAGGAAA
TCCTAAGAAAGGGCAACCAAATTGGTTAGCTCAGAATATAAATACTGGTA
GGTTTGATTATTTGTATTGGCTGCTTGCCGTTTTGAGTGTCATCAATTTC
TGTGCTTTCTTGTATTCTGCATATAGATACAAGTACAGGTCTGAGCAGAA
GCATGGCAATGACTATGAGGTGATGGAGAACAAGCTCTACGACAGCCCCA
TCTAAGGAATTGGAAGCTAGCTAATAATGCCATAATCTCAATTTTAATCT
TTTTCCAATTATGTGAATCTACTTTGAGCCTTGAAATTTTAAGCAAAAAG
CAAAGCTGTAAAACTCAGAACCACACAGTTGGTATATCAGTTGTTATCTT
TTTAGTTTTGATTAAAANNNANANAANNAAAAAAAAAAAAAAAAA
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