EY730686

Overview
NameEY730686
Unique NameEY730686
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC_MOUSE (Mitochondrial thiamine pyrophosphate carrier OS=Mus musculus GN=Slc25a19 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.743e-36
Identity = 92/242 (38.02%), Postives = 137/242 (56.61%), Query Frame = 3
Query:  168 SKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQXHPKYGARVEHRAYRNMSDALXRNVQPKGWAGSYKG 893
            +KY G+FQA K I +EEG   FW+G+VPA ++ + Y A+QF    +L      ++  + H   SA+  +V G L+   AT+  +P D+LRT LA+QGEPK+Y  +R A   +  T G    Y GL+PT++ I PYAGLQF  Y + KR   DW  +   +   TG   NL      +CG  +G  +K   +PLD++KKR Q+ G + H +  A  + R+YR + D   + +Q +G  G +KG
Sbjct:   57 AKYHGIFQAAKQILQEEGPRAFWKGHVPAQILSIGYGAVQFLAFEELTELLYQANLYQTH-QFSAH--FVCGGLSAGTATLTVHPVDVLRTRLAAQGEPKIYNNLREAIRTMYKTEGPFVFYKGLTPTVIAIFPYAGLQFSCYRSLKR-AYDW--LIPPDGKQTGNLKNL------LCGCGSGVISKTFTYPLDLIKKRLQVGGFE-HAR-SAFGQVRSYRGLLDLTQQVLQEEGTRGFFKG 284          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC_MACFA (Mitochondrial thiamine pyrophosphate carrier OS=Macaca fascicularis GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.277e-36
Identity = 89/245 (36.33%), Postives = 133/245 (54.29%), Query Frame = 3
Query:  168 SKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK---RWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQXHPKYGARVEHRAYRNMSDALXRNVQPKGWAGSYKG 893
            +KY G+FQA++ I +EEGL  FW+G++PA ++ + Y A+QF     L       S  +        + +V G LA C AT+  +P D+LRT  A+QGEPKVY T+R A   +  + G +  Y GL+PTL+ I PYAGLQF  Y + K   +W M     ++ N             Q  +CG  AG  +K + +PLD+ KKR Q+ G + H +  A  + R Y+ + D   + +Q +G  G +KG
Sbjct:   57 AKYHGIFQASRQILQEEGLTAFWKGHIPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAR---EFSVHFVCGGLAACTATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAMPAEGKKNEN------------LQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFE-HAR-AAFGQVRRYKGLMDCAKQVLQKEGALGFFKG 284          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC_BOVIN (Mitochondrial thiamine pyrophosphate carrier OS=Bos taurus GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.294e-35
Identity = 86/243 (35.39%), Postives = 132/243 (54.32%), Query Frame = 3
Query:  168 SKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGL-QXHPKYGARVEHRAYRNMSDALXRNVQPKGWAGSYKG 893
            +KY G+ QA + I +EEG   FW+G++PA L+ + Y A+QF     L      +S  +        + ++ G L+ C AT+  +P D+LRT  A+QGEP+VY T+R A V +  T G    Y GL+PTL+ I PYAG QF  Y + KR   +W         + G  N   +F+  +CG  AG  +K + +PLD+ KKR Q+ G  Q    +G   + R+Y+ + D   + ++ +G  G +KG
Sbjct:   57 AKYHGILQAGRQILQEEGPTAFWKGHIPAQLLSIGYGAVQFLSFEALTELVHRASVRDAR---DFSVHFLCGGLSACVATLAVHPVDVLRTRFAAQGEPRVYKTLRDAVVTMYRTEGPLVFYKGLNPTLIAIFPYAGFQFSIYSSLKR-AYEW------ALPAEGKKN--GNFKNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFEQARASFG---QVRSYKGLLDCAGQVLREEGAQGCFKG 284          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC_HUMAN (Mitochondrial thiamine pyrophosphate carrier OS=Homo sapiens GN=SLC25A19 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.131e-34
Identity = 87/245 (35.51%), Postives = 131/245 (53.47%), Query Frame = 3
Query:  168 SKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK---RWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQXHPKYGARVEHRAYRNMSDALXRNVQPKGWAGSYKG 893
            +KY G+ QA++ I +EEG   FW+G+VPA ++ + Y A+QF     L       S  +        + +V G LA C AT+  +P D+LRT  A+QGEPKVY T+R A   +  + G +  Y GL+PTL+ I PYAGLQF  Y + K   +W +     ++ N             Q  +CG  AG  +K + +PLD+ KKR Q+ G + H +  A  + R Y+ + D   + +Q +G  G +KG
Sbjct:   57 AKYHGILQASRQILQEEGPTAFWKGHVPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAR---EFSVHFVCGGLAACMATLTVHPVDVLRTRFAAQGEPKVYNTLRHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNEN------------LQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFE-HAR-AAFGQVRRYKGLMDCAKQVLQKEGALGFFKG 284          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC_PONAB (Mitochondrial thiamine pyrophosphate carrier OS=Pongo abelii GN=SLC25A19 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.356e-33
Identity = 85/245 (34.69%), Postives = 130/245 (53.06%), Query Frame = 3
Query:  168 SKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK---RWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQXHPKYGARVEHRAYRNMSDALXRNVQPKGWAGSYKG 893
            +KY G+ QA++ I +EEG   FW+G++PA ++ + Y A+QF     L       S  +        + +V G LA C AT+  +P D+LRT  A+QGEPKVY T+  A   +  + G +  Y GL+PTL+ I PYAGLQF  Y + K   +W +     ++ N             Q  +CG  AG  +K + +PLD+ KKR Q+ G + H +  A  + R Y+ + D   + +Q +G  G +KG
Sbjct:   57 AKYHGILQASRQILQEEGPTAFWKGHIPAQILSIGYGAVQFLSFEMLTELVHRGSVYDAR---EFSVHFVCGGLAACMATLTVHPVDVLRTRFAAQGEPKVYNTLCHAVGTMYRSEGPQVFYKGLAPTLIAIFPYAGLQFSCYSSLKHLYKWAIPAEGKKNEN------------LQNLLCGSGAGVISKTLTYPLDLFKKRLQVGGFE-HAR-AAFGQVRRYKGLMDCAKQVLQKEGALGFFKG 284          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC1_SCLS1 (Mitochondrial thiamine pyrophosphate carrier 1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.432e-30
Identity = 84/243 (34.57%), Postives = 124/243 (51.03%), Query Frame = 3
Query:  174 YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQXHPKYGARVEHR---AYRNMSDALXRNVQPKGWAGSYKG 893
            Y G     K IFREEGL   W+GNVPA LM + YSAIQFT    + T A   +  E+ +  +A  S+++GA AG  AT  +YP DLLRT  A+QG  ++Y ++R++  DI    G RG + GL   + +IIPY G+ F TY+T  R  +    +   +  +T              G+ A   AK    P D+++KR Q++G         R  H+    Y  +   +   +Q +G+ G Y+G
Sbjct:   64 YKGTLPTIKRIFREEGLSALWKGNVPAELMYVSYSAIQFTTYRSV-TLALQDTVGEHRMPAAAE-SFIAGASAGAVATTATYPLDLLRTRFAAQGVERIYTSLRASIRDIAVNEGPRGFFQGLGAGVGQIIPYMGIFFATYETL-RVPLGTLHMPFGSGDAT-------------AGVLASVIAKTGIFPFDLIRKRLQVQGPTRE-----RYVHKNIPVYNGVFRTMRHIIQNEGYRGLYRG 285          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC1_BOTFB (Mitochondrial thiamine pyrophosphate carrier 1 OS=Botryotinia fuckeliana (strain B05.10) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.580e-29
Identity = 83/243 (34.16%), Postives = 122/243 (50.21%), Query Frame = 3
Query:  174 YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEGLQXHPKYGARVEHR---AYRNMSDALXRNVQPKGWAGSYKG 893
            Y G     K IFREEGL   W+GNVPA LM + YSAIQFT    + T     +  E+ +  +A  S+++GA AG  AT  +YP DLLRT  A+QG  +VY ++RS+  DI  + G RG + GL   + +I+PY G+ F TY++ +      N    S  +S               G+ A   AK    P D+++KR Q++G         R  H+    Y  +   +   +  +G+ G Y+G
Sbjct:   64 YKGTIPTIKRIFREEGLAALWKGNVPAELMYVSYSAIQFTTYRSV-TLGLQDAFGEHRLPAAAE-SFIAGASAGAVATTATYPLDLLRTRFAAQGIERVYTSLRSSIRDIAISEGPRGFFQGLGAGVGQIVPYMGIFFATYESLRLPMGTLNMPFGSADAS--------------AGVIASVIAKTGIFPFDLIRKRLQVQGPTRE-----RYVHKNIPVYNGVFQTMRHILHNEGYRGLYRG 285          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC1_NEUCR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neurospora crassa GN=tpc-1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.893e-28
Identity = 74/203 (36.45%), Postives = 105/203 (51.72%), Query Frame = 3
Query:  174 YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFA-AGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEG 779
            Y G     + I R EGL G W+GN+PA L+ + Y+A+QFT    +  F  A   K +N     +  S+++GA AG  AT  +YP DLLRT  A+QG  +VYP++  A   I ++ G  G + GL P L +IIPY G  F  Y+T +          SS ++              V G+ A   AK    PLD+V+KR Q++G
Sbjct:   68 YKGTLPTIRHILRTEGLTGLWKGNIPAELLYVSYAAVQFTTYRSITQFLQAAFPKDQNKQLPPSVESFIAGASAGGVATAVTYPLDLLRTRFAAQGVERVYPSLVQALKTIYASEGVTGYFRGLGPGLAQIIPYMGTFFCVYETLRPRLSKLELPYSSGSA--------------VAGVLASVMAKTGTFPLDLVRKRIQVQG 256          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC1_COCIM (Mitochondrial thiamine pyrophosphate carrier 1 OS=Coccidioides immitis GN=TPC1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.133e-27
Identity = 78/209 (37.32%), Postives = 108/209 (51.67%), Query Frame = 3
Query:  174 YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTV-------LHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNLSSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEG 779
            Y G     K IFREEG+ G W+GN+PA L+ + Y AIQFT        LH L         AE         S+VSGA AG   T  +YPFDLLRT  A+QG  K+YP++ +A   I +  G RG + G+S  + +I+PY GL F TY++         R+  S+        + ++      G+ A   AK    PLD+V+KR Q++G
Sbjct:   63 YKGTISTLKAIFREEGITGLWKGNIPAELLYIFYGAIQFTTYRTVTQSLHTLPPPYRLPQPAE---------SFVSGATAGGIGTFTTYPFDLLRTRFAAQGNDKIYPSLLTAIRSIHAHEGSRGFFRGVSAAVAQIVPYMGLFFATYESV--------RVPISSLHLPFGSGDATA------GVIASVIAKTGVFPLDLVRKRLQVQG 248          
BLAST of EY730686 vs. ExPASy Swiss-Prot
Match: TPC1_YARLI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Yarrowia lipolytica GN=TPC1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.295e-27
Identity = 73/215 (33.95%), Postives = 111/215 (51.63%), Query Frame = 3
Query:  174 YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKL-KTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQG----EPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFKRWTMDWNRIRSSNTSSTGADNNL--------SSFQLFVCGLAAGTCAKLVCHPLDVVKKRFQIEG 779
            Y G+FQ  + I R+EG+   W+GN+PA L+ + Y A QF   H + +   A +  AE     S   S+++GA AG  AT+ +YPFDL RT+ A+QG      K Y ++   F  I  T G  G + G+S +++ I PY GL F +Y           R++ S  + +   ++L          +Q    GL AGT +K +  PLD ++KR Q +G
Sbjct:   51 YRGIFQTMQQIVRDEGVTALWKGNIPAELLYVFYGATQFVTYHHVNQVINAYNETAEKWKISSGAQSFIAGATAGAGATIATYPFDLFRTLFAAQGAKNCNVKNYTSLFQTFKLIYKTEGPLGFFRGVSSSIISIAPYMGLFFASY----------GRVKDSLDAFSNKHHDLLVSYNLPTKGWQEATAGLCAGTASKALVFPLDTIRKRLQTQG 255          
The following BLAST results are available for this feature:
BLAST of EY730686 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 179
Match NameE-valueIdentityDescription
TPC_MOUSE1.743e-3638.02Mitochondrial thiamine pyrophosphate carrier OS=Mu... [more]
TPC_MACFA2.277e-3636.33Mitochondrial thiamine pyrophosphate carrier OS=Ma... [more]
TPC_BOVIN4.294e-3535.39Mitochondrial thiamine pyrophosphate carrier OS=Bo... [more]
TPC_HUMAN2.131e-3435.51Mitochondrial thiamine pyrophosphate carrier OS=Ho... [more]
TPC_PONAB2.356e-3334.69Mitochondrial thiamine pyrophosphate carrier OS=Po... [more]
TPC1_SCLS15.432e-3034.57Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_BOTFB1.580e-2934.16Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_NEUCR3.893e-2836.45Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_COCIM1.133e-2737.32Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_YARLI3.295e-2733.95Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-033-C10-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY730686 ID=EY730686; Name=EY730686; organism=Citrus sinensis; type=EST; length=893bp
CACGCGTCCGGAGATCTTCATCCTTGGTGATGTTACATTAATCTATTGAG
TGTGTGGGATGGTTAGATAAGTAACTTCAAAAGTTATGGAAATGGCCGAG
GCATCACTTGGTTCAATTGGAGCCCACGACTTCATGGGCGTTGCTAAATG
GACATATATCCAGGCCATCAAAATATACTGGCATGTTCCAAGCAACGAAG
GATATATTTAGAGAGGAAGGTTTATGGGGTTTCTGGCGTGGCAATGTGCC
AGCCTTACTTATGGTTATGCCATACAGTGCCATACAATTTACAGTGTTAC
ACAAATTGAAAACATTCGCTGCTGGTTCTTCCAAGGCAGAAAATCATATT
AATTTAAGCGCTTACTTGTCTTATGTCAGTGGGGCATTAGCTGGGTGTGC
AGCTACTGTTGGATCATATCCATTTGATCTTTTACGAACCATATTAGCGT
CACAAGGAGAACCTAAGGTGTATCCCACAATGAGGTCTGCATTTGTTGAT
ATTGTCAGCACCCGAGGCTTTAGAGGACTGTATGCTGGGCTGTCACCTAC
ACTGGTTGAGATTATTCCTTATGCTGGCCTGCAATTCGGCACATATGATA
CATTCAAGCGCTGGACCATGGACTGGAACCGGATAAGATCTTCTAATACA
AGCTCCACTGGTGCAGACAATAATCTTTCAAGTTTTCAGCTTTTTGTCTG
TGGATTAGCGGCTGGAACATGTGCTAAACTTGTTTGTCATCCACTTGATG
TGGTCAAGAAACGATTCCAGATTGAAGGACTCCAAANGCACCCGAAATAT
GGTGCTAGAGTTGAGCACCGTGCTTACAGAAATATGTCTGATGCCCTAAN
CCGAAATGTGCAACCAAAGGGGTGGGCTGGTTCTTATAAGGGG
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