EY730680

Overview
NameEY730680
Unique NameEY730680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY730680 vs. ExPASy Swiss-Prot
Match: ZN363_HUMAN (RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens GN=RCHY1 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 6.063e-34
Identity = 64/169 (37.87%), Postives = 88/169 (52.07%), Query Frame = 3
Query:  186 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFENKQDVIVLPCGRTIHKNCLKGM 692
            GC+HY R C ++APCC++++ CR CH         D    H + R +V +V C  C   Q  QQ C  C    GEY+C+ C LFD D  KKQYH             +FFHC KC  C +M L+  H C+E     +CP+C E +  ++    VLPCG  +H+ C + M
Sbjct:   19 GCEHYDRGCLLKAPCCDKLYTCRLCH---------DNNEDHQLDRFKVKEVQCINCEKIQHAQQTCEECSTLFGEYYCDICHLFDKD--KKQYHCENCGICRIGPKEDFFHCLKCNLCLAMNLQGRHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEM 176          
BLAST of EY730680 vs. ExPASy Swiss-Prot
Match: ZN363_MOUSE (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus GN=Rchy1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 5.133e-33
Identity = 62/169 (36.69%), Postives = 87/169 (51.48%), Query Frame = 3
Query:  186 GCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXXNFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFENKQDVIVLPCGRTIHKNCLKGM 692
            GC+HY R C ++APCC++++ CR CH         D    H + R +V +V C  C   Q  QQ C +C    GEY+C  C LFD D  K+QYH             +FFHC KC  C +  L+  H C+E     +CP+C E +  ++    VLPCG  +H+ C + M
Sbjct:   19 GCEHYDRACLLKAPCCDKLYTCRLCH---------DTNEDHQLDRFKVKEVQCINCEKLQHAQQTCEDCSTLFGEYYCSICHLFDKD--KRQYHCESCGICRIGPKEDFFHCLKCNLCLTTNLRGKHKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEM 176          
BLAST of EY730680 vs. ExPASy Swiss-Prot
Match: YERG_SCHPO (Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe GN=SPAC2F3.16 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.493e-32
Identity = 63/186 (33.87%), Postives = 95/186 (51.08%), Query Frame = 3
Query:  129 ESTNHNGSTELLRKGFMEYGCQHYRRRCRIRAPCCNEIFDCRHCHNEAMNNINVDQKLRHDIPRHEVNQVICSLCGTEQKVQQVCVNCGVCMGEYFCESCKLFDDDTSKKQYHXXXXXXXXXXXXX--NFFHCNKCRCCYSMLLKNSHPCVEGAMHHDCPVCCEYLFENKQDVIVLPCGRTIHKNC 680
            E T ++   E+L       GC HY R C+++   C+E + CRHCHN+A +         H + R  V  ++C +C   Q   Q C  C  CMG Y+C  CKL+DDD +K  YH               ++FHC  C  C  + + N+H C+E +   +CP+C EY+F +++ VI L C   +H+ C
Sbjct:  129 EKTYYDKEQEIL-------GCSHYMRNCKVQCFDCHEWYTCRHCHNDACD---------HVLERPAVENMLCMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIGRGLGDDYFHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLSCSHPLHQRC 298          
The following BLAST results are available for this feature:
BLAST of EY730680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ZN363_HUMAN6.063e-3437.87RING finger and CHY zinc finger domain-containing ... [more]
ZN363_MOUSE5.133e-3336.69RING finger and CHY zinc finger domain-containing ... [more]
YERG_SCHPO1.493e-3233.87Uncharacterized RING finger protein C2F3.16 OS=Sch... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-033-C02-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY730680 ID=EY730680; Name=EY730680; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGGTCCATCATTCCAGCCATCAACAATTTGAGCCAATGAGT
ACATCGTGCAAAGCAGATGAAATTTTTTCTACACCCTCATACTCTCATCT
GGCAGATAGAGAGTTTTTGGTAACCGAAGAATCAACTAATCATAACGGTT
CGACCGAATTGCTGAGGAAAGGATTCATGGAGTATGGATGCCAGCACTAT
CGAAGACGGTGCCGCATTAGAGCTCCCTGTTGCAATGAGATCTTTGATTG
TCGTCACTGTCATAACGAGGCAATGAATAATATTAATGTTGATCAGAAGC
TTAGGCATGACATTCCGCGGCATGAAGTCAACCAGGTGATATGTTCGCTC
TGTGGCACTGAACAAAAGGTTCAGCAAGTTTGTGTTAATTGTGGTGTATG
CATGGGTGAATACTTCTGCGAGAGTTGCAAGCTGTTTGATGATGATACAT
CCAAGAAGCAATATCATTGTGATGGATGTGGAATATGCAGGATTGGTGGA
TGTGATAATTTCTTCCATTGCAACAAGTGTAGATGCTGCTACTCAATGCT
TTTGAAGAACAGCCACCCATGTGTAGAAGGTGCAATGCATCATGACTGCC
CTGTCTGCTGTGAGTATTTATTCGAGAACAAACAGGATGTAATTGTCTTG
CCGTGTGGGCGTACCATTCACAAAAATTGCTTGAAGGGGATGCGGGGACA
TCATCAATATGCCGTCCTATCTGGTCGAGTCATCTGTGACTGTCCAGTTT
GGAGAATATACAGGAGATGCGGTTATCCGTGCCAAGCTTACCAGAAACGG
GGGATCTTTGAGGAGGTGTAGGCTGAGGCGGTCTGGGGGGCAGAGCAGGC
GCGCCCTGATGGTGGGGGTGAGGTGCCCCTCGT
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