EY755435

Overview
NameEY755435
Unique NameEY755435
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755435_ssr284 microsatellite EY755435_ssr284:284..301. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7942 contig Csv1_Contig7942:131..1051. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755435 vs. ExPASy Swiss-Prot
Match: CRTZ_ESCVU (Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=4 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.477e-18
Identity = 48/117 (41.03%), Postives = 72/117 (61.54%), Query Frame = 3
Query:  516 AAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGTGITVFGMAYMFLHDGLVHKSFPVGSIADVPYFRRVXGAYQLYHS 866
            + + ME  A + H+ + H   W  HESHH PR+G FELND+FA++ A  AIAL++ G    G+ P      G G+TV+G+ Y  +HDGLVH+ +P   I    Y +R+  A++L+H+
Sbjct:   11 SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVG--TAGVWP--LQWIGCGMTVYGLLYFLVHDGLVHQRWPFHWIPRRGYLKRLYVAHRLHHA 123          
BLAST of EY755435 vs. ExPASy Swiss-Prot
Match: CRTZ_PANAN (Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=4 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.161e-17
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 3
Query:  522 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGTGITVFGMAYMFLHDGLVHKSFPVGSIADVPYFRRVXGAYQLYHS 866
            +GME  A  AHK + H   W  H SHH PR+G FE+ND++A++ A  +I L+  G    G+ P    GA  G+T +G+ Y  +HDGLVH+ +P   I    Y +R+  A++++H+
Sbjct:   15 IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG--STGMWPLQWIGA--GMTAYGLLYFMVHDGLVHQRWPFRYIPRKGYLKRLYMAHRMHHA 125          
BLAST of EY755435 vs. ExPASy Swiss-Prot
Match: CRTZ_PARS1 (Beta-carotene hydroxylase OS=Paracoccus sp. (strain PC1) GN=crtZ PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.651e-13
Identity = 42/124 (33.87%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  498 FALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGTGITVFGMAYMFLHDGLVHKSFPVGSIADVPYFRRVXGAYQLYHS 866
            F + V   + ME  A   H+ + H  L W  H+SHH   +   E ND++ ++ AV A  L + G +   ++    +    G+TV+G+ Y  LHDGLVH+ +P   I    YFRR+  A++L+H+
Sbjct:    4 FLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGVVFAVLATILFTVGAYWWPVL----WWIALGMTVYGLIYFILHDGLVHQRWPFRYIPRRGYFRRLYQAHRLHHA 123          
BLAST of EY755435 vs. ExPASy Swiss-Prot
Match: CRTZ_PARSN (Beta-carotene hydroxylase OS=Paracoccus sp. (strain N81106 / MBIC 01143) GN=crtZ PE=4 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.193e-13
Identity = 41/124 (33.06%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  498 FALSVGAAVGMEFWARWAHKALWHASL-WHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGTGITVFGMAYMFLHDGLVHKSFPVGSIADVPYFRRVXGAYQLYHS 866
            F + V   + ME  A   H+ + H  L W  H+SHH   +   E ND++ ++ AV A  L + G+    ++    +    G+TV+G+ Y  LHDGLVH+ +P   I    Y RR+  A++L+H+
Sbjct:    4 FLIVVATVLVMELTAYSVHRWIMHGPLGWGWHKSHHEEHDHALEKNDLYGLVFAVIATVLFTVGWIWAPVL----WWIALGMTVYGLIYFVLHDGLVHQRWPFRYIPRKGYARRLYQAHRLHHA 123          
The following BLAST results are available for this feature:
BLAST of EY755435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CRTZ_ESCVU6.477e-1841.03Beta-carotene hydroxylase OS=Escherichia vulneris ... [more]
CRTZ_PANAN7.161e-1739.13Beta-carotene hydroxylase OS=Pantoea ananas GN=crt... [more]
CRTZ_PARS11.651e-1333.87Beta-carotene hydroxylase OS=Paracoccus sp. (strai... [more]
CRTZ_PARSN8.193e-1333.06Beta-carotene hydroxylase OS=Paracoccus sp. (strai... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-028-C03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755435 ID=EY755435; Name=EY755435; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGTGCTTTTACTCTAAAACCCAAAACCTCGTAAACAAACAA
AACCCCACCATGGCGGTCGGACTATTGGCCGCCATAGTCCCGAAGCCCTT
CTGTCTCCTCACAACAAAACTTCAACCCTCTTCGCTCCTCACAACAAAAC
CCGCTCCCCTTTTTGCCCCTCTCGGTACCCGCCACGGCTTCTTTAATGGC
AAAAACCGAAGAAAAATCAACTCTTTCACCGTATGTTTTGTTTTAGAGGA
GAAAAAACAAAGCACCCAGATCGAGACTTTCACGGAGGAGGAGGAGGAGG
AGTCGGGTACCCAGATCTCGACTGCTGCCCGCGTGGCCGAGAAATTGGCG
AGAAAGAGATCCGAGAGGTTCACTTATCTCGTTGCTGCCGTCATGTCTAG
TTTTGGTATCACTTCCATGGCTGTCATGGCTGTTTATTACAGGTTCTGGT
GGCAAATGGAGGGTGGAGAGGTGCCTTTAGCTGAAATGTTTGGCACATTT
GCTCTCTCTGTTGGTGCTGCTGTGGGCATGGAGTTTTGGGCACGATGGGC
TCATAAAGCTCTGTGGCATGCTTCTTTATGGCATATGCACGAGTCTCACC
ATCGACCAAGAGAGGGTCCTTTTGAGCTAAACGATGTGTTTGCCATAATC
AACGCAGTTCCAGCCATAGCCCTTCTCTCTTTTGGCTTCTTCCACAAAGG
CCTTGTACCTGGTCTCTGTTTTGGTGCTGGCACTGGCATTACGGTGTTTG
GGATGGCCTACATGTTCCTCCACGATGGTCTCGTTCACAAAAGTTTCCCT
GTGGGTTCCATTGCCGACGTGCCTTATTTCCGGAGAGTCNCTGGGGCTTA
CCAGCTTTACCACTCGGATAATTTCCCGGGGTTCCATATGGGCTCTTTTT
CGGACTAAGGACCTGGAAAA
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