EY755403

Overview
NameEY755403
Unique NameEY755403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755403_ssr273 microsatellite EY755403_ssr273:273..290. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7942 contig Csv1_Contig7942:142..1027. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY755403 vs. ExPASy Swiss-Prot
Match: CRTZ_ESCVU (Beta-carotene hydroxylase OS=Escherichia vulneris GN=crtZ PE=4 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13
Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 1 
Query:  505 AAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGDAYMFVHDGSRHK--SSLWVP 798
            + + ME  A + H+ + H   W  HESHH PR+G FELND+FA++ A  AIAL++ G    G+ P    G G+  TV+G  Y  VHDG  H+     W+P
Sbjct:   11 SVIAMEGIAAFTHRYIMHGWGWRWHESHHTPRKGVFELNDLFAVVFAGVAIALIAVG--TAGVWPLQWIGCGM--TVYGLLYFLVHDGLVHQRWPFHWIP 106
[Close]
BLAST of EY755403 vs. ExPASy Swiss-Prot
Match: CRTZ_PANAN (Beta-carotene hydroxylase OS=Pantoea ananas GN=crtZ PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.119e-11
Identity = 38/90 (42.22%), Postives = 52/90 (57.78%), Query Frame = 1 
Query:  511 VGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSFGFFHKGLVPGLCFGAGLGITVFGDAYMFVHDGSRHK 780
            +GME  A  AHK + H   W  H SHH PR+G FE+ND++A++ A  +I L+  G    G+ P    GAG+  T +G  Y  VHDG  H+
Sbjct:   15 IGMEVIAALAHKYIMHGWGWGWHLSHHEPRKGAFEVNDLYAVVFAALSILLIYLG--STGMWPLQWIGAGM--TAYGLLYFMVHDGLVHQ 100
The following BLAST results are available for this feature:
BLAST of EY755403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CRTZ_ESCVU5.933e-1342.00Beta-carotene hydroxylase OS=Escherichia vulneris ... [more]
CRTZ_PANAN1.119e-1142.22Beta-carotene hydroxylase OS=Pantoea ananas GN=crt... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-027-H04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755403 ID=EY755403; Name=EY755403; organism=Citrus sinensis; type=EST; length=884bp
TGCTTTTTCTCTAAAACCCAAAACCTCGTAAACAAACAAAACCCCACCAT
GGCGGTCGGACTATTGGCCGCCATAGTCCCGAAGCCCTTCTGTCTCCTCA
CAACAAAACTTCAACCCTCTTCGCTCCTCACAACAAAACCCGCTCCCCTT
TTTGCCCCTCTCGGTACCCGCCACGGCTTCTTTAATGGCAAAAACCGAAG
AAAAATCAACTCTTTCACCGTATGTTTTGTTTTAGAGGAGAAAAAACAAA
GCACCCAGATCGAGACTTTCACGGAGGAGGAGGAGGAGGAGTCGGGTACC
CAGATCTCGACTGCTGCCCGCGTGGCCGAGAAATTGGCGAGAAAGAGATC
CGAGAGGTTCACTTATCTCGTTGCTGCCGTCATGTCTAGTTTTGGTATCA
CTTCCATGGCTGTCATGGCTGTTTATTACAGGTTCTGGTGGCAAATGGAG
GGTGGAGAGGTGCCTTTAGCTGAAATGTTTGGCACATTTGCTCTCTCTGT
TGGTGCTGCTGTGGGCATGGAGTTTTGGGCACGATGGGCTCATAAAGCTC
TGTGGCATGCTTCTTTATGGCATATGCACGAGTCTCACCATCGACCAAGA
GAGGGTCCTTTTGAGCTAAACGATGTGTTTGCCATAATCAACGCAGTTCC
AGCCATAGCCCTTCTCTCTTTTGGCTTCTTCCACAAAGGCCTTGTACCTG
GTCTCTGTTTTGGTGCTGGACTTGGCATTACGGTGTTTGGGGATGCCTAC
ATGTTCGTCCACGATGGGTCTCGTCACAAAAGTTCCCTGTGGGTCCCATT
GCCCACGTGCCTTATTCCGGAGAGTCGCTGCGGCTCACAGCTTACCACTC
GGTAAATTCACGGGTTNCATAGGGCTCTTCTCGA
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