EY755400

Overview
NameEY755400
Unique NameEY755400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: YCF43_GRATL (Uncharacterized tatC-like protein ycf43 OS=Gracilaria tenuistipitata var. liui GN=ycf43 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.108e-20
Identity = 38/77 (49.35%), Postives = 50/77 (64.94%), Query Frame = 1
Query:  400 EMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGSSFGKP 630
            EMSIF+HLEELRQRIF++ L        CF Y K +   L+ P  + G++FLQLAPGE+ FT++KV+ Y G     P
Sbjct:   10 EMSIFEHLEELRQRIFIAALIFIVITAICFTYMKNISYILQQP--AIGIKFLQLAPGEYLFTSIKVALYSGFLLSSP 84          

HSP 2 Score: 43.8986 bits (102), Expect = 3.108e-20
Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 2
Query:  611 GLLLGSPVILYEIIAFVLPGLTRAERRFLGPMV-*ALHTFLAGIAFS 748
            G LL SP I+Y+I  F+LPGLT+ E  F+ P++  ++  F +GI F+
Sbjct:   78 GFLLSSPFIIYQITLFILPGLTKKESNFIVPILFISIILFFSGIVFA 124          
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: YCF43_CYACA (Uncharacterized tatC-like protein ycf43 OS=Cyanidium caldarium GN=ycf43 PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 4.304e-19
Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  391 DDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGSSFGKP 630
            D  +MSI++HLEELRQR   S++A+  +++ C      LI  ++ P  + G++FLQL+PGE+FFT++K++ Y G     P
Sbjct:    8 DSFQMSIYEHLEELRQRSIESIVALLISMVVCSLNINILIELIKQP--AIGIKFLQLSPGEYFFTSIKITLYLGIILSSP 85          

HSP 2 Score: 49.6766 bits (117), Expect = 4.304e-19
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 2
Query:  608 VGLLLGSPVILYEIIAFVLPGLTRAERRFLGPMV*ALH-TFLAGIAF 745
            +G++L SP+I YEII F++PGLT+ ERR L P++ A    F+AG+ F
Sbjct:   78 LGIILSSPIIFYEIIIFIIPGLTKKERRLLIPILIASGCLFVAGLIF 124          
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: YCF43_GUITH (Uncharacterized tatC-like protein ycf43 OS=Guillardia theta GN=ycf43 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.224e-18
Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1
Query:  394 DKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGSSFGKP 630
            + EMS+ +HLEE+RQR F S   +   I+ C  + K ++  L+ P  + G++FLQ APGE+FF ++KV+ Y G     P
Sbjct:   54 EAEMSLAEHLEEIRQRAFWSFSVLTTMIISCIIFVKNIVKTLQEP--AAGIKFLQFAPGEYFFASIKVAAYSGILISSP 130          

HSP 2 Score: 44.2838 bits (103), Expect = 1.224e-18
Identity = 21/46 (45.65%), Postives = 34/46 (73.91%), Query Frame = 2
Query:  611 GLLLGSPVILYEIIAFVLPGLTRAERRFLGP-MV*ALHTFLAGIAF 745
            G+L+ SP I+Y+I+ FVLPG+T+ ER+ L P ++ ++  FL G+ F
Sbjct:  124 GILISSPFIVYQILLFVLPGMTKDERKTLLPIIIGSMILFLLGLIF 169          
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: Y194_SYNY3 (Uncharacterized protein sll0194 OS=Synechocystis sp. (strain PCC 6803) GN=sll0194 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.735e-17
Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 1
Query:  385 LPDDKEMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCG------------SSFGKPGNSL*DNSLCSPRSYESREKVFGAHGLGSSYFS 729
            +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF + K L+ +L+ P  +  V+FLQL+PGEFFF ++KV+GY G              F  PG +  +  L  P    S    F   GLG +Y++
Sbjct:   21 VPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQLSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFA--GLGFAYYA 143          
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: YCF43_PORYE (Uncharacterized tatC-like protein ycf43 OS=Porphyra yezoensis GN=ycf43 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.956e-16
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  301 PRDETLENLNQDGVESPLYNFLFPDKELLPDDKEMSIFDHLEELRQR-IFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCG 612
            P++  L N N D V+ P             +D  MSI +HLEELRQR +FV +  + A  +  F   K ++  L+AP  + G++FLQLAPGE+FF+++KV+ YCG
Sbjct:    5 PQNNLLTNENIDHVDIP------------ENDIPMSITEHLEELRQRTLFVFLFFLFATTIS-FTQIKIIVAILQAP--AVGIKFLQLAPGEYFFSSIKVAIYCG 94          

HSP 2 Score: 37.7354 bits (86), Expect = 3.956e-16
Identity = 20/80 (25.00%), Postives = 45/80 (56.25%), Query Frame = 2
Query:  611 GLLLGSPVILYEIIAFVLPGLTRAERRFLGP-MV*ALHTFLAGIAFSTGFNSAALIFWLYAEGWGVLWSLFILEVVLGYV 847
            G++  +P  +Y++I ++LPGLT  ER+ + P ++ ++  F+ G  F+    + A + +L + G  ++  L+  E    ++
Sbjct:   94 GIVATTPFAVYQVILYILPGLTGKERKIILPLLISSVLLFITGGIFAYFVLAPAALTFLISYGSDIVEPLWSFEQYFDFI 173          
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: YCF43_PORPU (Uncharacterized tatC-like protein ycf43 OS=Porphyra purpurea GN=ycf43 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 1.907e-15
Identity = 40/105 (38.10%), Postives = 62/105 (59.05%), Query Frame = 1
Query:  301 PRDETLENLNQDGVESPLYNFLFPDKELLPDDKEMSIFDHLEELRQR-IFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCG 612
            P++  L N+N +    P             +D  MSI +HLEELRQR +FV +  + AA +  F   K ++   +AP  + G++FLQLAPGE+FF+++K++ YCG
Sbjct:    5 PQNNLLANINTNSENLP------------ENDVPMSITEHLEELRQRTVFVFIFFLLAATIS-FTQIKIIVEIFQAP--AIGIKFLQLAPGEYFFSSIKIAIYCG 94          

HSP 2 Score: 36.965 bits (84), Expect = 1.907e-15
Identity = 20/80 (25.00%), Postives = 45/80 (56.25%), Query Frame = 2
Query:  611 GLLLGSPVILYEIIAFVLPGLTRAERRFLGP-MV*ALHTFLAGIAFSTGFNSAALIFWLYAEGWGVLWSLFILEVVLGYV 847
            G++  +P  +Y++I ++LPGLT  ER+ + P ++ ++  F+ G  F+    + A + +L + G  ++  L+  E    ++
Sbjct:   94 GIVATTPFGVYQVILYILPGLTNKERKVILPILIGSIVLFIVGGIFAYFVLAPAALNFLISYGADIVEPLWSFEQYFDFI 173          
BLAST of EY755400 vs. ExPASy Swiss-Prot
Match: YCF43_ODOSI (Uncharacterized tatC-like protein ycf43 OS=Odontella sinensis GN=ycf43 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.581e-13
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1
Query:  400 EMSIFDHLEELRQRIFVSVLAVGAAILGCFAYSKELIMFLEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGSSFGKP 630
            E+   +H+EEL+QR+F +   +           K L+  LE PV +  V+F QL+PGE+F +T+K+S Y G  FG P
Sbjct:   35 ELPFSEHIEELKQRLFHTFWIILILTFISLCEVKLLVKILELPVNN--VKFFQLSPGEYFVSTVKISFYTGFLFGSP 109          

HSP 2 Score: 38.1206 bits (87), Expect = 3.581e-13
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 2
Query:  611 GLLLGSPVILYEIIAFVLPGLTRAERRFLGP-MV*ALHTFLAGIAFS-TGFNSAALIFWL 784
            G L GSP  + +II F+LPGLT+ E + + P ++ +L  F  G+ FS      AAL F+L
Sbjct:  103 GFLFGSPFAIGQIILFLLPGLTKKETKIILPLLLSSLGLFGFGLVFSYYALIPAALNFFL 162          
The following BLAST results are available for this feature:
BLAST of EY755400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
YCF43_GRATL3.108e-2049.35Uncharacterized tatC-like protein ycf43 OS=Gracila... [more]
YCF43_CYACA4.304e-1941.25Uncharacterized tatC-like protein ycf43 OS=Cyanidi... [more]
YCF43_GUITH1.224e-1840.51Uncharacterized tatC-like protein ycf43 OS=Guillar... [more]
Y194_SYNY36.735e-1740.94Uncharacterized protein sll0194 OS=Synechocystis s... [more]
YCF43_PORYE3.956e-1640.95Uncharacterized tatC-like protein ycf43 OS=Porphyr... [more]
YCF43_PORPU1.907e-1538.10Uncharacterized tatC-like protein ycf43 OS=Porphyr... [more]
YCF43_ODOSI3.581e-1338.96Uncharacterized tatC-like protein ycf43 OS=Odontel... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-027-H01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755400 ID=EY755400; Name=EY755400; organism=Citrus sinensis; type=EST; length=880bp
AAACGATATTTAGACGAGAAAATGGGAAGCACGAGCACGGCACTCATGGC
TCACTTGCGGCTAAGCTACGGCTGCTTCTCTAAACGACACGAGCCAATCA
GAAACCGAATGAATAGTGTGAAAGTTAACAGCAGTTCGAAGCTGAGATTC
GGCGTTTCGCGGAGCAGGAGGAGGTTTGAAGATGCACTCGTTTGTTTTGC
TGCGTTCGACGGTGATGATGCGAGGGATAATCAGCCTGAATTAGGTTCCA
GTGGTGGTGTTGGCTCTGCTGTTGAAGATAGACCTGATGTGACTGATATT
CCAAGAGATGAAACACTGGAAAATCTAAACCAAGATGGTGTGGAAAGTCC
TCTTTATAATTTTCTGTTCCCTGATAAAGAGCTACTCCCAGATGATAAAG
AAATGAGTATATTTGATCATCTAGAAGAGCTGCGCCAGAGAATATTCGTG
TCAGTTTTAGCAGTTGGAGCCGCTATCTTGGGATGCTTTGCATATTCCAA
GGAGCTGATAATGTTTCTTGAAGCTCCTGTTAAATCAGAGGGTGTACGAT
TTCTGCAGTTAGCTCCTGGAGAATTTTTCTTTACAACTTTAAAGGTGTCC
GGATATTGTGGGTCTTCTTTTGGGAAGCCCGGTAATTCTCTATGAGATAA
TAGCCTTTGTTCTCCCAGGTCTTACGAGAGCAGAGAGAAGGTTTTTGGGG
CCCATGGTTTAGGCTCTTCATACTTTTCTTGCTGGAATTGCCTTCTCTAC
TGGGTTTAACTCAGCGGCCTTAATTTTTTGGTTATATGCTGAAGGGTGGG
GAGTTTTGTGGTCTTTGTTCATCCTTGAGGTGGTCTTGGGCTATGTTCCC
CAGGCTTGTTTTCCGGTTCATTATCAAATA
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