EY755348

Overview
NameEY755348
Unique NameEY755348
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY755348_ssr549 microsatellite EY755348_ssr549:549..566. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1432 contig Csv1_Contig1432:1..637. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CML29_ORYSJ (Probable calcium-binding protein CML29 OS=Oryza sativa subsp. japonica GN=CML29 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.691e-28
Identity = 70/153 (45.75%), Postives = 101/153 (66.01%), Query Frame = 3
Query:   42 QSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLE-MNTKDMELGSLGNLLKAAFESLN--LDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXEDLQLI 491
            Q++ LS + E L+++ SLVE F+AFDSDNDG +T  EL G+  S+G    E +VR+M+ + DA+ DG LS+EE L+ MN   + LG+LG LL++A  +L      D +L   EL  ++  +G   S+ DC EIIA MDGDGDGA+S E+ +L+
Sbjct:   15 QAQQLSVDFEALSYISSLVEAFQAFDSDNDGLVTAPELRGLLASLGLDKPEHEVRDMLARADADRDGKLSVEELLDVMNAGQLGLGALGALLQSAVPALESAAGPDGVLGADELARLLSVMGTA-SVEDCMEIIACMDGDGDGAISVEEFRLM 166          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CML25_ARATH (Probable calcium-binding protein CML25 OS=Arabidopsis thaliana GN=CML25 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.387e-22
Identity = 51/152 (33.55%), Postives = 88/152 (57.89%), Query Frame = 3
Query:   39 AQSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXEDLQLIV 494
            A S  L +       +  L   F+ FD + DG I+  EL  I  S+G+   EE++ + + + D   DG ++ EEF+E+NTK M+   +   LK AF   ++DG+  ++  ELHEV+ +LG   S+A+C+++I  +D DGDG +  E+ ++++
Sbjct:   20 ADSPYLQKARSGKTEIRELEAVFKKFDVNGDGKISSKELGAIMTSLGHEVPEEELEKAITEIDRKGDGYINFEEFVELNTKGMDQNDVLENLKDAFSVYDIDGNGSISAEELHEVLRSLGDECSIAECRKMIGGVDKDGDGTIDFEEFKIMM 171          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CML15_ORYSJ (Probable calcium-binding protein CML15 OS=Oryza sativa subsp. japonica GN=CML15 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.175e-19
Identity = 51/160 (31.87%), Postives = 93/160 (58.13%), Query Frame = 3
Query:   18 DCRS*SMAQSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDM-ELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXEDLQLIV 494
            D  + + A+ RP + E ET          FR FD++ DG I+ AEL+ +F SVG+  ++++V  MM++ D++ DG +SL EF  ++     +  +    L+ AF   + DG+ ++T AEL  V+  +G   ++A C+ +I  +D +GDG ++ E+ +L++
Sbjct:   38 DLAAAAAAKPRPPAAEDET-------ERVFRKFDANGDGRISRAELAALFRSVGHAVTDDEVARMMQEADSDGDGYISLGEFAAISAPPPGDAAAAEEDLRHAFGVFDADGNGVITPAELARVLRGIGEAATVAQCRRMIDGVDRNGDGLINFEEFKLMM 190          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: POLC2_JUNOX (Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 49/137 (35.77%), Postives = 85/137 (62.04%), Query Frame = 3
Query:   84 VLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXEDLQLIV 494
            V  L E F+ FD++ DG I+G+EL+ I  S+G    E +V+ MM + DA+ DG +SL+EF+++N K    G+    LK AF+  + D +  ++ AEL   +E++G   ++ + + II ++D +GDG +S E+ Q ++
Sbjct:   24 VHELEEVFKKFDANGDGKISGSELADILRSLGSDVGEAEVKAMMEEADADGDGYVSLQEFVDLNNK----GASVKDLKNAFKVFDRDCNGSISAAELCHTLESVGEPCTIEESKNIIHNVDKNGDGLISVEEFQTMM 156          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CML10_ORYSJ (Probable calcium-binding protein CML10 OS=Oryza sativa subsp. japonica GN=CML10 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.302e-19
Identity = 44/131 (33.59%), Postives = 82/131 (62.60%), Query Frame = 3
Query:  105 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMN-TKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXEDLQLIV 494
            FR FD++ DG I+ +EL  +F S+G+ A+++++  MM + DA+ DG +SL+EF  +N T   +  ++   L+ AF   + DG+  ++ AEL  V+  LG   ++  C+ +I  +D +GDG +S E+ ++++
Sbjct:   45 FRKFDANGDGRISRSELGALFESLGHAATDDELARMMAEADADGDGFISLDEFAALNATASGDAAAVEEDLRHAFRVFDADGNGTISAAELARVLHGLGEKATVQQCRRMIEGVDQNGDGLISFEEFKVMM 175          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.028e-17
Identity = 45/130 (34.62%), Postives = 77/130 (59.23%), Query Frame = 3
Query:  105 FRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEF---LEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXEDLQ 485
            F  FD++ DG I+G EL+G+  ++G   S+E++  +M + D + DG ++++EF   ++  T         N LK AFE  + D + +++  ELH+++  LG   +  DC E+I S+D DGDG VS E+ +
Sbjct:   25 FNRFDANGDGKISGDELAGVLKALGSNTSKEEIGRIMEEIDTDKDGFINVQEFAAFVKAETDPYPSSGGENELKEAFELYDQDHNGLISSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEEFK 154          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CALM_RENRE (Calmodulin OS=Renilla reniformis PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.343e-17
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   72 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXED 479
            T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ DG +   EFL M  + M+       ++ AF   + DGD  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V+ E+
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.343e-17
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   72 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXED 479
            T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ DG +   EFL M  + M+       ++ AF   + DGD  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V+ E+
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CALM_STRIE (Calmodulin OS=Strongylocentrotus intermedius PE=2 SV=3)

HSP 1 Score: 88.9669 bits (219), Expect = 2.291e-17
Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 3
Query:   36 MAQSRPLSEETETLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXED 479
            M+Q   ++ +  T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ +G +   EFL M  + M+       ++ AF   + DG+  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V+ E+
Sbjct:    1 MSQELTINADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 148          
BLAST of EY755348 vs. ExPASy Swiss-Prot
Match: CALM_PYUSP (Calmodulin OS=Pyuridae sp. PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.104e-17
Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 3
Query:   72 TLNHVLSLVETFRAFDSDNDGSITGAELSGIFNSVGYRASEEDVREMMRQGDANNDGLLSLEEFLEMNTKDMELGSLGNLLKAAFESLNLDGDDILTGAELHEVIENLGVGLSLADCQEIIASMDGDGDGAVSXED 479
            T   +    E F  FD D DG+IT  EL  +  S+G   +E ++++M+ + DA+ DG +   EFL M  + M+       ++ AF   + DG+  ++ AEL  V+ NLG  L+  +  E+I   D DGDG V+ E+
Sbjct:    6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 141          
The following BLAST results are available for this feature:
BLAST of EY755348 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
CML29_ORYSJ1.691e-2845.75Probable calcium-binding protein CML29 OS=Oryza sa... [more]
CML25_ARATH1.387e-2233.55Probable calcium-binding protein CML25 OS=Arabidop... [more]
CML15_ORYSJ4.175e-1931.88Probable calcium-binding protein CML15 OS=Oryza sa... [more]
POLC2_JUNOX9.302e-1935.77Polcalcin Jun o 2 OS=Juniperus oxycedrus PE=1 SV=2[more]
CML10_ORYSJ9.302e-1933.59Probable calcium-binding protein CML10 OS=Oryza sa... [more]
ALL8_OLEEU1.028e-1734.62Calcium-binding allergen Ole e 8 OS=Olea europaea ... [more]
CALM_RENRE1.343e-1734.56Calmodulin OS=Renilla reniformis PE=1 SV=2[more]
CALM_PATSP1.343e-1734.56Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_STRIE2.291e-1731.76Calmodulin OS=Strongylocentrotus intermedius PE=2 ... [more]
CALM_PYUSP5.104e-1733.82Calmodulin OS=Pyuridae sp. PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-027-B10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755348 ID=EY755348; Name=EY755348; organism=Citrus sinensis; type=EST; length=641bp
TTAATATTATTTGTTGTGATTGCAGAAGTTGATCCATGGCTCAATCCAGG
CCTCTCTCCGAGGAAACCGAGACATTGAACCATGTCTTAAGTCTAGTGGA
GACTTTCAGAGCCTTTGATTCGGACAACGATGGGTCGATCACTGGTGCTG
AGCTCTCTGGAATATTCAATTCAGTTGGTTACAGGGCTAGCGAGGAAGAT
GTCAGGGAAATGATGCGGCAAGGTGACGCGAACAACGACGGATTGCTGAG
CTTGGAGGAGTTCTTGGAGATGAACACCAAAGACATGGAGCTTGGAAGCC
TTGGGAATTTGCTCAAGGCAGCTTTTGAATCTCTGAATCTTGATGGTGAT
GATATCTTAACTGGAGCAGAGCTGCATGAAGTTATTGAAAATTTAGGAGT
TGGGTTGTCATTAGCTGATTGCCAGGAGATTATTGCTTCCATGGATGGAG
ACGGTGATGGTGCTGTTAGCTNTGAGGACCTCCAATTAATAGTTAATTCC
CTCCTCTAGAATCTCAACAGTCAACACAACGTATGTAATGCTACATGCTA
TATATATATATATATAGTAATAAACAATCACTAGCGTGTAGATCTATTAC
CATGCATCCTCCATTACTCTGCCAAANNAAAAANNNNNAAA
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