EY755312

Overview
NameEY755312
Unique NameEY755312
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.981e-62
Identity = 110/130 (84.62%), Postives = 116/130 (89.23%), Query Frame = 1
Query:  112 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEMA 501
            MTLGSGGSSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGT+ GPHNTVHEGRIYQLKLFCDKDYPEKPP+VRF SR+NM CVNHETGVV+PKKFGL ANW RE+TMEDIL  L KEM+
Sbjct:    1 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMS 130          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.790e-60
Identity = 110/131 (83.97%), Postives = 117/131 (89.31%), Query Frame = 1
Query:  112 MTLGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEMAA 504
            MTLGSG SSVVVPRNFR      RGEKGIGDGTVSYGMDDGDDIYMRSWTGT+ GPHNTVHEGRIYQLKLFCDKDYPEKPP+VRF SRINMTCVNH+TGVV+ KKFG+ ANW R++TMEDILT L KEMAA
Sbjct:    1 MTLGSG-SSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAA 130          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 4.178e-48
Identity = 88/127 (69.29%), Postives = 100/127 (78.74%), Query Frame = 1
Query:  118 LGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEM 498
            +GS    VVVPRNFR      RGEKGIGDGTVSYGMDD DDI M+SWTGT+ GPHNT +EG+I+QLKLFC KDYPE PP+VRF+SRINM CVN E GVV+P  F + +NW REFTMED+L  L KEM
Sbjct:    1 MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEM 127          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.537e-47
Identity = 87/127 (68.50%), Postives = 100/127 (78.74%), Query Frame = 1
Query:  118 LGSGGSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEM 498
            + S  + VVVPRNFR      RGEKGIGDGTVSYGMDD DDIYM+SWTGT+ GP NT +EG+I+QLKLFC K+YPE PP+VRF++RINM CVN ETGVVEP  F +  NW RE+TMEDIL  L KEM
Sbjct:    1 MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEM 127          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.214e-32
Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 1
Query:  145 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEMAA 504
            +PRNF        GEK  GDGT+SYG++  DDI + SW GT+ GP NT  + R Y LKL+CDKDYP KPP+VRF ++IN+ CVN + GVV+PK   + +NW  +  +++IL+ L +EM++
Sbjct:    4 IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLYCDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: MMS2_SCHPO (Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe GN=spm2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.326e-29
Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 1
Query:  145 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEMAA 504
            VPRNF+      +GEKG+G+ + SYG+ + DDI +  W  T+ GP ++VHE RIY LK+ CD +YP+ PP V F SRIN+  V+ ETG V P K     +W RE++ME +L  L KEMA+
Sbjct:    4 VPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMAS 123          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UB2V1_HUMAN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo sapiens GN=UBE2V1 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.156e-28
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  130 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEM 498
            GS V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG + GP  T++E RIY LK+ C   YPE PP VRF ++INM  VN   GVV+P+   + A W   ++++ +L  L + M
Sbjct:    6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLM 128          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UB2V1_BOVIN (Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos taurus GN=UBE2V1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.156e-28
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 1
Query:  130 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEM 498
            GS V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG + GP  T++E RIY LK+ C   YPE PP VRF ++INM  VN   GVV+P+   + A W   ++++ +L  L + M
Sbjct:    6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLM 128          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UB2V1_MOUSE (Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus musculus GN=Ube2v1 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.816e-28
Identity = 57/123 (46.34%), Postives = 80/123 (65.04%), Query Frame = 1
Query:  130 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEM 498
            GS V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG + GP  T++E RIY LK+ C   YPE PPSVRF +R+NM+ V+   GVV+P+   + A W    +++ IL  L + M
Sbjct:    6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPSVRFVTRVNMSGVSSSNGVVDPRATAVLAKWQNSHSIKVILQELRRLM 128          
BLAST of EY755312 vs. ExPASy Swiss-Prot
Match: UB2V1_CHICK (Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus GN=UBE2V1 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.070e-27
Identity = 55/122 (45.08%), Postives = 78/122 (63.93%), Query Frame = 1
Query:  133 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDGDDIYMRSWTGTVFGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFRSRINMTCVNHETGVVEPKKFGLFANWPREFTMEDILTPLTKEM 498
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG + GP  T++E RIY LK+ C   YPE PP VRF ++INM  VN   GVV+P+   + A W   F+++ +L  L + M
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSFSIKVVLQELRRLM 126          
The following BLAST results are available for this feature:
BLAST of EY755312 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
UEV1D_ARATH2.981e-6284.62Ubiquitin-conjugating enzyme E2 variant 1D OS=Arab... [more]
UEV1C_ARATH2.790e-6083.97Ubiquitin-conjugating enzyme E2 variant 1C OS=Arab... [more]
UEV1B_ARATH4.178e-4869.29Ubiquitin-conjugating enzyme E2 variant 1B OS=Arab... [more]
UEV1A_ARATH3.537e-4768.50Ubiquitin-conjugating enzyme E2 variant 1A OS=Arab... [more]
UBE2V_DICDI3.214e-3249.17Probable ubiquitin-conjugating enzyme E2 variant O... [more]
MMS2_SCHPO3.326e-2948.33Ubiquitin-conjugating enzyme spm2 OS=Schizosacchar... [more]
UB2V1_HUMAN2.156e-2845.53Ubiquitin-conjugating enzyme E2 variant 1 OS=Homo ... [more]
UB2V1_BOVIN2.156e-2845.53Ubiquitin-conjugating enzyme E2 variant 1 OS=Bos t... [more]
UB2V1_MOUSE2.816e-2846.34Ubiquitin-conjugating enzyme E2 variant 1 OS=Mus m... [more]
UB2V1_CHICK1.070e-2745.08Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallu... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-026-G01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755312 ID=EY755312; Name=EY755312; organism=Citrus sinensis; type=EST; length=861bp
CGTTTTTGCTTGCCTACCTCTTGTGCTCAAGCATCTCTTCTCTTCCTCCG
ACCCCTCTCCCCCTTTCGTTCTCTCTTAGATCTCAGCTTACCCATCATCA
AAATCGCAACCATGACGCTAGGCTCAGGAGGATCCAGTGTCGTGGTCCCT
CGGAACTTCAGATTGTTGGAGGAACTTGAACGCGGAGAAAAAGGTATTGG
AGATGGCACTGTCAGCTATGGAATGGATGATGGAGATGACATTTACATGC
GCTCTTGGACTGGCACCGTTTTCGGTCCTCACAATACTGTACATGAAGGT
AGAATTTATCAGTTGAAGCTGTTCTGTGATAAAGATTATCCAGAGAAGCC
ACCAAGTGTTCGTTTTCGTTCTCGAATCAACATGACTTGTGTTAACCATG
AAACTGGAGTGGTGGAACCTAAAAAGTTTGGACTTTTTGCGAATTGGCCG
CGAGAGTTCACCATGGAGGATATACTCACACCACTGACAAAGGAGATGGC
TGCCCCCCTCTTTCGGTAGCTGGTTTCAACCTCCTGAGGTGTCCTTCTTG
TGGCTTCTAGGATCTTTCCGTCTCCTGGGGGTTATTGCCTTTGCCGTGTG
CCGGTTTCTTCTTGTCGTTCTGTGGTGTGGTGATGACCTCGTATGGTGAT
GCTTTGCTGGGTTCTTTTTCGTTTCCTTCTCCTGGTTCTTTTCTCGCTTT
GTTTTTTTCTCTCCCTCCTTTTCCTCTTGTTGGGACGGTGTTCCTGGCGG
CTAGGCGTTTTTTTGGCGTTCTTTTTCTTCTTATACCATATGTAATGTGG
GTGCTGCTTCTNTGTACCCTGCTTTTTTCTTGTTGTAGCAAATAATAATT
AAAAAATATAA
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