EY755248

Overview
NameEY755248
Unique NameEY755248
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_SOLTU (Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1 PE=1 SV=2)

HSP 1 Score: 252.677 bits (644), Expect = 1.620e-72
Identity = 130/174 (74.71%), Postives = 135/174 (77.59%), Query Frame = 3
Query:  189 MAMKRVASSAINAXXXXXXXXXXXXXXXXXXXXXXKKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPG 710
            MAM RVAS+A  A                      KKIVGVFYK NEYA MNPNFLGC E   G+REWLESKGHQYIVT DKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAG+GSDH+DLK     GLTVAEVTG + VSVAEDELMRILILVRNFLPG
Sbjct:    1 MAMSRVASTAARAITSPSSLVFTRELQASPGP---KKIVGVFYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPG 171          

HSP 2 Score: 42.3578 bits (98), Expect = 1.620e-72
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 2
Query:  698 FLTWTHQVISGEWNVARVAYKAMILK-KEVGTCGW*PIGN-CAPTTKPFN 841
            FL   HQVI+GEWNVA +A++A  L+ K VGT G   IG       KPFN
Sbjct:  168 FLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPFN 217          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_ARATH (Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=FDH1 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 7.277e-70
Identity = 124/174 (71.26%), Postives = 137/174 (78.74%), Query Frame = 3
Query:  189 MAMKRVASSAINAXXXXXXXXXXXXXXXXXXXXXXKKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPG 710
            MAM++ A + I A                      KKIVGVFYK NEYA+ NPNFLGCVE   G+R+WLES+GHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNL+LLLTAG+GSDHIDL+     GLTVAEVTG +VVSVAEDELMRILIL+RNF+PG
Sbjct:    1 MAMRQAAKATIRACSSSSSSGYFARRQFNASSGDSKKIVGVFYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPG 174          

HSP 2 Score: 36.5798 bits (83), Expect = 7.277e-70
Identity = 22/49 (44.90%), Postives = 29/49 (59.18%), Query Frame = 2
Query:  698 FLTWTHQVISGEWNVARVAYKAMILK-KEVGTCGW*PIGN-CAPTTKPF 838
            F+   +QV+ GEWNVA +AY+A  L+ K +GT G   IG       KPF
Sbjct:  171 FVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF 219          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH1_ORYSJ (Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486800 PE=1 SV=2)

HSP 1 Score: 231.106 bits (588), Expect = 2.977e-65
Identity = 112/139 (80.58%), Postives = 122/139 (87.77%), Query Frame = 3
Query:  294 KKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPG 710
            KKIVGVFYKG EYA  NPNF+GCVEG  G+REWLESKGH YIVTDDKEG + ELEKHI D+HVLI+TPFHPAYV+AERIKKAKNL+LLLTAG+GSDHIDL      GLTVAEVTG + VSVAEDELMRILIL+RNFLPG
Sbjct:   28 KKIVGVFYKGGEYADKNPNFVGCVEGALGIREWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPG 166          

HSP 2 Score: 39.6614 bits (91), Expect = 2.977e-65
Identity = 25/50 (50.00%), Postives = 29/50 (58.00%), Query Frame = 2
Query:  698 FLTWTHQVISGEWNVARVAYKAMILK-KEVGTCGW*PIGN-CAPTTKPFN 841
            FL    QV+ GEWNVA +AY+A  L+ K VGT G   IG       KPFN
Sbjct:  163 FLPGYQQVVHGEWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPFN 212          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH2_ORYSJ (Formate dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486900 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 5.517e-64
Identity = 107/139 (76.98%), Postives = 121/139 (87.05%), Query Frame = 3
Query:  294 KKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPG 710
            KK+VGVFYKG EYA  NPNF+GCV+   G+R WLESKGH+YIVTDDKEG +CELEKHI D HVLI+TPFHPAY+TAERIKKAKNL+LLLTAGVGSDHIDL      GLTVAE+TG + VSVAED+LMRIL+L+RNFLPG
Sbjct:   30 KKVVGVFYKGGEYADKNPNFVGCVDSALGIRGWLESKGHRYIVTDDKEGINCELEKHIEDAHVLITTPFHPAYITAERIKKAKNLELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPG 168          

HSP 2 Score: 39.6614 bits (91), Expect = 5.517e-64
Identity = 23/50 (46.00%), Postives = 30/50 (60.00%), Query Frame = 2
Query:  698 FLTWTHQVISGEWNVARVAYKAMILK-KEVGTCGW*PIGN-CAPTTKPFN 841
            FL   HQ+++GEWNVA +A++   L+ K VGT G   IG       KPFN
Sbjct:  165 FLPGHHQIVNGEWNVAGIAHRTYDLEGKTVGTVGAGRIGRLLLQRLKPFN 214          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_HORVU (Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.213e-60
Identity = 106/139 (76.26%), Postives = 118/139 (84.89%), Query Frame = 3
Query:  294 KKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPG 710
            KKIVGVFY+  EYA  NPNF+GCVEG  G+R+WLESKGH YIVTDDKEG + ELEKHI D+HVLI+TPFHPAYVTAE+IKKAK  +LLLTAG+GSDHIDL      GLTVA VTG + VSVAEDELMRILIL+RNFLPG
Sbjct:   29 KKIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGFNSELEKHIEDMHVLITTPFHPAYVTAEKIKKAKTPELLLTAGIGSDHIDLPAAAAAGLTVARVTGSNTVSVAEDELMRILILLRNFLPG 167          

HSP 2 Score: 36.1946 bits (82), Expect = 1.213e-60
Identity = 23/50 (46.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  698 FLTWTHQVISGEWNVARVAYKAMILK-KEVGTCGW*PIGN-CAPTTKPFN 841
            FL    QV+ GEWNVA +A++A  L+ K VGT G    G       KPFN
Sbjct:  164 FLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRYGRLLLQRLKPFN 213          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_PICAN (Formate dehydrogenase OS=Pichia angusta GN=FMDH PE=3 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 2.124e-37
Identity = 76/139 (54.68%), Postives = 96/139 (69.06%), Query Frame = 3
Query:  297 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXG--LTVAEVTGKHVVSVAEDELMRILILVRNFLP 707
            K+V V Y   ++A       GC E   G+R+WLE +GH  +VT DKEG +  LEK+I D  V+ISTPFHPAY+T ERI KAK L+LL+ AGVGSDHIDL      G  ++V EVTG +VVSVAE  +M +L+LVRNF+P
Sbjct:    2 KVVLVLYDAGKHAQDEERLYGCTENALGIRDWLEKQGHDVVVTSDKEGQNSVLEKNISDADVIISTPFHPAYITKERIDKAKKLKLLVVAGVGSDHIDLDYINQSGRDISVLEVTGSNVVSVAEHVVMTMLVLVRNFVP 140          

HSP 2 Score: 26.1794 bits (56), Expect = 2.124e-37
Identity = 15/39 (38.46%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  698 FLTWTHQVISGEWNVARVAYKAMILK-KEVGTCGW*PIG 811
            F+    Q+ISG WNVA +A  +  ++ K + T G   IG
Sbjct:  138 FVPAHEQIISGGWNVAEIAKDSFDIEGKVIATIGAGRIG 176          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_EMENI (Probable formate dehydrogenase OS=Emericella nidulans GN=aciA PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 2.988e-36
Identity = 71/144 (49.31%), Postives = 97/144 (67.36%), Query Frame = 3
Query:  309 VFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDL--KXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPGPIKLSVGN 734
            V Y G  +A   P  LG  E   G+R+W+E +GH  + T DK+G +   +K + D  V+I+TPFHP Y+TAER+ KAKNL+L +TAG+GSDH+DL        G+TVAEVTG +VVSVAE  +M IL+LVRNF+P   ++  G+
Sbjct:    2 VLYDGGSHAKDQPGLLGTTENELGIRKWIEEQGHTLVTTSDKDGENSTFDKELVDAEVIITTPFHPGYLTAERLAKAKNLKLAVTAGIGSDHVDLDAANKTNGGITVAEVTGSNVVSVAEHVVMTILLLVRNFVPAHDQIRNGD 145          

HSP 2 Score: 26.9498 bits (58), Expect = 2.988e-36
Identity = 19/44 (43.18%), Postives = 24/44 (54.55%), Query Frame = 2
Query:  716 QVISGEWNVARVAYKAMILK-KEVGTCGW*PIG-NCAPTTKPFN 841
            Q+ +G+WNVA VA     L+ K VGT G   IG       KPF+
Sbjct:  140 QIRNGDWNVAAVAKNEFDLENKVVGTVGVGRIGERVLRRLKPFD 183          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_NEUCR (Formate dehydrogenase OS=Neurospora crassa GN=fdh PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.826e-35
Identity = 70/147 (47.62%), Postives = 99/147 (67.35%), Query Frame = 3
Query:  297 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLK--XXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPGPIKLSVG 731
            K++ V Y G ++    P  LG ++   GLR+WLE +GH  + T DK+G +   +K + D  ++I+TPFHP Y+TAER+ +AK L+L +TAG+GSDH+DL        G+TVAEVTG +VVSVAE  LM IL+LVRNF+P   ++  G
Sbjct:    3 KVLAVLYDGGKHGEEVPELLGTIQNELGLRKWLEDQGHTLVTTCDKDGENSTFDKELEDAEIIITTPFHPGYLTAERLARAKKLKLAVTAGIGSDHVDLNAANKTNGGITVAEVTGSNVVSVAEHVLMTILVLVRNFVPAHEQIQEG 149          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH_PSESR (Formate dehydrogenase OS=Pseudomonas sp. (strain 101) PE=1 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = 3
Query:  354 LGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLP 707
            LG V G  GLR++LES GH  +VT DK+GPD   E+ + D  V+IS PF PAY+T ERI KAKNL+L LTAG+GSDH+DL+      +TVAEVT  + +SVAE  +M IL LVRN+LP
Sbjct:   51 LGSVSGELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIAKAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLP 168          
BLAST of EY755248 vs. ExPASy Swiss-Prot
Match: FDH2_YEAST (Formate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=FDH2 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.449e-28
Identity = 59/139 (42.45%), Postives = 93/139 (66.91%), Query Frame = 3
Query:  297 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEG-PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLKXXXXXGLTVAEVTGKHVVSVAEDELMRILILVRNFLPG 710
            K++ V Y+G ++A      LGC+E   G+R ++E +G++ + T DK+  P   +++ + D  ++I+TPF PAY++  RI +A NL+L +TAGVGSDH+DL+      +TV EVTG +VVSVAE  +  IL+L+RN+  G
Sbjct:    5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGG 143          

HSP 2 Score: 23.0978 bits (48), Expect = 1.449e-28
Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 2
Query:  716 QVISGEWNVARVAYKAMILK-KEVGTCGW*PIG 811
            Q I+GEW++A VA     L+ K + T G   IG
Sbjct:  146 QAINGEWDIAGVAKNEYDLEDKIISTVGAGRIG 178          
The following BLAST results are available for this feature:
BLAST of EY755248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FDH_SOLTU1.620e-7274.71Formate dehydrogenase, mitochondrial OS=Solanum tu... [more]
FDH_ARATH7.277e-7071.26Formate dehydrogenase, mitochondrial OS=Arabidopsi... [more]
FDH1_ORYSJ2.977e-6580.58Formate dehydrogenase 1, mitochondrial OS=Oryza sa... [more]
FDH2_ORYSJ5.517e-6476.98Formate dehydrogenase 2, mitochondrial OS=Oryza sa... [more]
FDH_HORVU1.213e-6076.26Formate dehydrogenase, mitochondrial OS=Hordeum vu... [more]
FDH_PICAN2.124e-3754.68Formate dehydrogenase OS=Pichia angusta GN=FMDH PE... [more]
FDH_EMENI2.988e-3649.31Probable formate dehydrogenase OS=Emericella nidul... [more]
FDH_NEUCR8.826e-3547.62Formate dehydrogenase OS=Neurospora crassa GN=fdh ... [more]
FDH_PSESR1.319e-3057.63Formate dehydrogenase OS=Pseudomonas sp. (strain 1... [more]
FDH2_YEAST1.449e-2842.45Formate dehydrogenase 2 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-025-H07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755248 ID=EY755248; Name=EY755248; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGCAAAAGCAAAAACGTTATCAAATTTCATGTTTTCACCAT
CTCGTTTAAATAAATTAAAATAAAAAGGCAAAGCAGAAGTCAAAGCCTGC
CGTTAAAACTTGAAAAGGTTTCCCCTATAAAAGCGCTGTGCTTTTGTGAG
AACTCAGCAGTGTGAGTGACAAATTATATAATTGGGAGATGGCCATGAAG
AGAGTAGCTAGCTCTGCAATTAACGCTTTTGCTTCGTCGGGATTTCTTCG
TTCATCGTCGAGATTTTCTCGACACTATGCTTCTTCTGGAAGTAAGAAGA
TTGTTGGGGTGTTCTACAAGGGCAATGAATACGCTTCAATGAATCCCAAC
TTTCTTGGTTGTGTGGAGGGAGGCTGTGGCCTGCGTGAATGGCTGGAATC
GAAAGGTCACCAATATATTGTCACTGATGACAAAGAGGGACCAGACTGTG
AACTAGAGAAACATATTCCTGATCTCCATGTCCTCATATCTACCCCCTTC
CACCCTGCCTATGTTACGGCGGAAAGGATTAAGAAGGCCAAAAATTTGCA
ACTGCTTCTCACTGCTGGAGTTGGCTCTGATCATATTGATCTAAAAGCTG
CTGCTGCTGCTGGTTTAACTGTTGCTGAAGTTACTGGAAAGCATGTGGTT
TCAGTTGCTGAGGACGAGCTTATGAGAATCCTTATTCTTGTCCGTAATTT
CTTACCTGGACCCATCAAGTTATCAGTGGGGAATGGAATGTTGCCCGTGT
TGCTTATAAAGCTATGATCTTGAAGAAAGAAGTGGGAACTTGTGGTTGGT
GACCCATTGGCAACTGTGCTCCAACGACTAAACCTTTCAATGAATCTCCT
TA
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