EY755242

Overview
NameEY755242
Unique NameEY755242
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length807
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: FCSA_DICDI (Fatty acyl-CoA synthetase A OS=Dictyostelium discoideum GN=fcsA PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17
Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = 2
Query:  440 DYKYLGTR-VRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGSCIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVFC 733
            D  +LG R +  DG  G+YKW++Y +A      +GS L+  G++KG  IG++ +NRPEW++ D A   +S +   LY TLG +A++Y+VNH+ +  + C
Sbjct:   67 DSNFLGIRELLADGKRGDYKWISYKQACIRANNIGSALVQLGLNKGDRIGIFSINRPEWVLSDMAAMNHSLVPVALYATLGANAIEYVVNHSEISVLLC 165          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL1_MOUSE (Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.222e-16
Identity = 46/118 (38.98%), Postives = 65/118 (55.08%), Query Frame = 2
Query:  383 HPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGS--CIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVF 730
            + ++ T +D F R +    +   LG+R         Y+W++Y E       +GSGLI  G    S   IGL+  NRPEW+IV+  C +YS +  PLYDTLG DA+ YIVN A +  +F
Sbjct:   87 YDDVRTMYDGFQRGIQVSNNGPCLGSRKPNQ----PYEWISYKEVAELAECIGSGLIQKGFKPCSEQFIGLFSQNRPEWVIVEQGCFSYSMVVVPLYDTLGADAITYIVNKAELSVIF 200          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL1_CAVPO (Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porcellus GN=ACSL1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.456e-15
Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 2
Query:  383 HPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGI--SKGSCIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVF 730
            + ++ T +D F R +    +   LG+R         Y+W++Y +       +GS L+  G   S    IG++  NRPEW+I++ AC AYS +  PLYDTLG DA+ YIVN A +  +F
Sbjct:   86 YDDVRTLYDVFQRGIQVSNNGPCLGSRKPDQ----PYEWLSYKQVEDLSECIGSALLQKGFQASPDQFIGIFAQNRPEWVIIEQACFAYSMVVVPLYDTLGADAITYIVNKAELSVIF 199          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL1_RAT (Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norvegicus GN=Acsl1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 2
Query:  383 HPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKGS--CIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVF 730
            + ++ T +D F R +    D   LG+R         Y+W++Y +       +GS LI  G    S   IG++  NRPEW+ ++  C  YS +  PLYDTLG DA+ YIVN A +  +F
Sbjct:   87 YDDVRTMYDGFQRGIQVSNDGPCLGSRKPNQ----PYEWISYKQVAEMAECIGSALIQKGFKPCSEQFIGIFSQNRPEWVTIEQGCFTYSMVVVPLYDTLGTDAITYIVNKAELSVIF 200          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL1_HUMAN (Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapiens GN=ACSL1 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.716e-14
Identity = 41/118 (34.75%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  383 HPEIGTTHDNFVRAVDTFRDYKYLGTRVRVDGTVGEYKWMTYGEAGTARTEVGSGLIYHGISKG--SCIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVF 730
            + ++ T ++ F R +    +   LG+R         Y+W++Y +       +GS LI  G        IG++  NRPEW+I++  C AYS +  PLYDTLG +A+ YIVN A +  VF
Sbjct:   86 YDDVTTLYEGFQRGIQVSNNGPCLGSRKPDQ----PYEWLSYKQVAELSECIGSALIQKGFKTAPDQFIGIFAQNRPEWVIIEQGCFAYSMVIVPLYDTLGNEAITYIVNKAELSLVF 199          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL6_HUMAN (Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapiens GN=ACSL6 PE=2 SV=4)

HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14
Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 2
Query:  491 YKWMTYGEAGTARTEVGSGLIYHGISK--GSCIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAV 727
            Y+W++Y E       +GSGL+ H         IG++  NRPEW+IV+ AC  YS +  PLYDTLGP A++YI+N A +  V
Sbjct:  118 YQWLSYQEVADRAEFLGSGLLQHNCKACTDQFIGVFAQNRPEWIIVELACYTYSMVVVPLYDTLGPGAIRYIINTADISTV 198          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL6_RAT (Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norvegicus GN=Acsl6 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.901e-14
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 2
Query:  491 YKWMTYGEAGTARTEVGSGLIYHGISKGS--CIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVFCVLXH 745
            Y+W++Y E       +GSGL+ H    G+   IG++  NRPEW+I + AC  YS +  PLYDTLGP +++YI+N A +  V     H
Sbjct:  118 YQWLSYQEVAKRAEFLGSGLLQHDCKVGTEQFIGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSIRYIINTADICTVIVDKPH 204          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL5_RAT (Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norvegicus GN=Acsl5 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.348e-13
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  491 YKWMTYGEAGTARTEVGSGLIYHGI--SKGSCIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVFC 733
            YKW++Y +       +GS L++ G   S+   IG++  NRPEW+I + AC  YS ++ PLYDTLG +A+ Y++N A +  V C
Sbjct:  103 YKWISYKQVSDRAEYLGSCLLHKGYKPSQDQFIGIFAQNRPEWVISELACYTYSMVAVPLYDTLGAEAIIYVINRADISVVIC 185          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL6_MOUSE (Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculus GN=Acsl6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.760e-13
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = 2
Query:  491 YKWMTYGEAGTARTEVGSGLIYHGISKGS--CIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVFCVLXH 745
            Y+W++Y E       +GSGL+ H    G+   +G++  NRPEW+I + AC  YS +  PLYDTLGP ++ YI+N A +  V     H
Sbjct:  118 YQWLSYQEVAKRAEFLGSGLLQHDCKVGTEQFVGVFAQNRPEWIIAELACYTYSMVVVPLYDTLGPGSISYIINTADICTVIVDKPH 204          
BLAST of EY755242 vs. ExPASy Swiss-Prot
Match: ACSL5_HUMAN (Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapiens GN=ACSL5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.760e-13
Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 2
Query:  491 YKWMTYGEAGTARTEVGSGLIYHGI--SKGSCIGLYFVNRPEWLIVDHACSAYSFISGPLYDTLGPDAVKYIVNHASVQAVFC 733
            Y+W++Y +       +GS L++ G   S    +G++  NRPEW+I + AC  YS ++ PLYDTLGP+A+ +IVN A +  V C
Sbjct:  103 YRWLSYKQVSDRAEYLGSCLLHKGYKSSPDQFVGIFAQNRPEWIISELACYTYSMVAVPLYDTLGPEAIVHIVNKADIAMVIC 185          
The following BLAST results are available for this feature:
BLAST of EY755242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
FCSA_DICDI2.009e-1739.39Fatty acyl-CoA synthetase A OS=Dictyostelium disco... [more]
ACSL1_MOUSE2.222e-1638.98Long-chain-fatty-acid--CoA ligase 1 OS=Mus musculu... [more]
ACSL1_CAVPO2.456e-1536.44Long-chain-fatty-acid--CoA ligase 1 OS=Cavia porce... [more]
ACSL1_RAT7.146e-1535.59Long-chain-fatty-acid--CoA ligase 1 OS=Rattus norv... [more]
ACSL1_HUMAN2.716e-1434.75Long-chain-fatty-acid--CoA ligase 1 OS=Homo sapien... [more]
ACSL6_HUMAN3.547e-1444.44Long-chain-fatty-acid--CoA ligase 6 OS=Homo sapien... [more]
ACSL6_RAT7.901e-1441.38Long-chain-fatty-acid--CoA ligase 6 OS=Rattus norv... [more]
ACSL5_RAT1.348e-1340.96Long-chain-fatty-acid--CoA ligase 5 OS=Rattus norv... [more]
ACSL6_MOUSE1.760e-1340.23Long-chain-fatty-acid--CoA ligase 6 OS=Mus musculu... [more]
ACSL5_HUMAN1.760e-1340.96Long-chain-fatty-acid--CoA ligase 5 OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-025-G12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755242 ID=EY755242; Name=EY755242; organism=Citrus sinensis; type=EST; length=807bp
CCACGCGTCCGGCCTTCGTCTCTTATTCTAACACAATAATTAACAGATTC
CCGAACTAACAGGAGGAAAAAATATTATTATTATTATTATTACCGACTTC
ATCTTCATTCATTCAAACAAGCAGGCAAGGAAAAGGAGAAATAAAATAAA
ATCAAAAGTCATGGATTCCACGGCAGCTCAACGTCGTTTAAAGGCCATTC
ACGGCCACCTTCTCTGCGCAGACGACAGTTCATCCTCTCAGCTCCGTCAC
AATCCCACCGCCGGCGAGTACGCCCTCGAGCAGGGCTACAGTGTTGTGCT
TCCCGAGAAACTGGATACGGGAAAATGGAACGTATACAGGTCTTCTCGAT
CACCGTTGAAGCTTGTGAGTAGATTCCCGGATCATCCTGAAATTGGTACA
ACACATGACAATTTTGTGCGGGCAGTTGATACTTTTCGAGATTACAAATA
TCTGGGTACGCGTGTCCGGGTTGATGGAACAGTTGGAGAGTACAAATGGA
TGACATATGGAGAAGCTGGCACTGCTCGCACAGAAGTAGGTTCTGGCCTA
ATTTATCATGGAATATCAAAGGGATCTTGCATTGGATTGTATTTTGTCAA
TAGACCGGAGTGGCTTATTGTTGATCATGCCTGCTCTGCTTATTCTTTCA
TATCTGGTCCTCTGTATGACACTCTTGGTCCAGATGCAGTCAAGTACATT
GTAAATCATGCTTCTGTACAAGCCGTATTTTGTGTGCTNANACATTGAAT
TCTTTGCTGAGCTGCTTGTCTGAGGTTCCACCGTCCGTCTAATTGTGTTA
TTGGGCG
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