EY755241

Overview
NameEY755241
Unique NameEY755241
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755241 vs. ExPASy Swiss-Prot
Match: SCL15_ARATH (Scarecrow-like protein 15 OS=Arabidopsis thaliana GN=SCL15 PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.499e-41
Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 2
Query:  185 GGFEFDYNYIEELIRAAECLDSNELQVAQMILARLNHSQNLVGSPPVVVAAGKPLQRAAIFFKEAXXXXXXXXXNGLTRPTSHLSSSWPEIIQSVRAYKAFTAISPIPMFTHFITTQALLESLFLDRGSGSPPLIHVIDFDIGFGGQYASFMREIADKAAAARHSNYSTSLRITAVVSDDYVTETGLVKATLCQFARELRIGLHVDFWPDRXFE 826
            GGF+F    IE+LIR  +C++S+ELQ+AQ++L+RLN     + SP     AG+PLQRAA +FKEA          G  R    LSS W EI+Q +RA K ++ ISPIP+F+HF   QA+L+SL       S P +HV+DF+IGFGGQYAS MREI +K+ +         LR+TAVV+++   ET LVK  L QFA E++I   ++F   + FE
Sbjct:  118 GGFDF----IEDLIRVVDCVESDELQLAQVVLSRLNQR---LRSP-----AGRPLQRAAFYFKEALGSFL----TGSNRNPIRLSS-WSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSL---SSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGF------LRVTAVVAEECAVETRLVKENLTQFAAEMKIRFQIEFVLMKTFE 305          
BLAST of EY755241 vs. ExPASy Swiss-Prot
Match: SCL6_ARATH (Scarecrow-like protein 6 OS=Arabidopsis thaliana GN=SLC6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.842e-20
Identity = 76/197 (38.58%), Postives = 106/197 (53.81%), Query Frame = 2
Query:  215 EELIRAAECLDSNELQVAQMILARLNHSQNLVGSPPVVVAAGKPLQRAAIFFKEAXXXXXXXXXNGLTRPTSHLSSSWPEIIQSVRAYKAFTAISPIPMFTHFITTQALLESLFLDRGSGSPPLIHVIDFDIGFGGQYASFMREIADKAAAARHSNYSTSLRITAVVS--DDYVTETGLVKATLCQFARELRIGLHV 799
            E+L++AAE ++S+   +AQ ILARLN       S PV    GKPL+RAA +FKEA         N L    S   + +  +I  + AYK+F+ ISP+  F +F + QALLES            +H+IDFDIG+GGQ+AS M+E+  +  AA       SL+IT   S  +    E G  +  L  FA E+ I L +
Sbjct:  207 EQLVKAAEVIESDTC-LAQGILARLNQQL----SSPV----GKPLERAAFYFKEAL--------NNLLHNVSQTLNPY-SLIFKIAAYKSFSEISPVLQFANFTSNQALLESFH------GFHRLHIIDFDIGYGGQWASLMQELVLRDNAA-----PLSLKITVFASPANHDQLELGFTQDNLKHFASEINISLDI 374          
BLAST of EY755241 vs. ExPASy Swiss-Prot
Match: SCL27_ARATH (Scarecrow-like protein 27 OS=Arabidopsis thaliana GN=SCL27 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.612e-15
Identity = 73/250 (29.20%), Postives = 108/250 (43.20%), Query Frame = 2
Query:  104 YHNNFPDHHPDAXXXXXXXXXXXXXLGGGFEFDYNYIEELIRAAECL------DSNELQVAQMILARLNHSQNLVGSPPVVVAAGKPLQRAAIFFKEAXXXXXXXXXNGLTRPTSHLSSSWP-----EIIQSVRAYKAFTAISPIPMFTHFITTQALLESLFLDRGSGSPPLIHVIDFDIGFGGQYASFMREIADKAAAARHSNYSTSLRIT------AVVSDDYVTETGLVKATLCQFARELRIGLHVD 802
            YHNN     P +              G   +     IE+L  AAE +      + +   +AQ ILARLNH  N   +         P QRAA    EA                 H  SS P      +I  + AY++F+  SP   F +F   Q++LES            IH+IDFD+G+GGQ++S M+E+A      R  N ++SL++T      + VSD++  E    +  L  FA E++I   ++
Sbjct:  233 YHNNQQQQFPSSSSSTAVAMVPVPSPGMAGDDQSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHK------SPFQRAASHIAEALLSLI------------HNESSPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESC----NESGFDRIHIIDFDVGYGGQWSSLMQELA-SGVGGRRRNRASSLKLTVFAPPPSTVSDEF--ELRFTEENLKTFAGEVKIPFEIE 457          
BLAST of EY755241 vs. ExPASy Swiss-Prot
Match: SCL22_ARATH (Scarecrow-like protein 22 OS=Arabidopsis thaliana GN=SCL22 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13
Identity = 70/206 (33.98%), Postives = 101/206 (49.03%), Query Frame = 2
Query:  212 IEELIRAAECLDSN----ELQVAQMILARLNHSQNLVGSPPVVVAAGKPLQRAAIFFKEAXXXXXXXXXNGLTRPTSHLSSSWPE-IIQSVRAYKAFTAISPIPMFTHFITTQALLESLF-LDRGSGSPPLIHVIDFDIGFGGQYASFMREIADKAAAARHSNYSTSLRITAVVSDDYVT---ETGLVKATLCQFARELRIGLHVD 802
            I++L  AA  L +N       +AQ ILARLNH+ N   +         P  RAA +  EA         + L+ P    S S P+ +I  + AY+AF+  SP   F +F   Q +LES    DR       IH++DFDIG+GGQ+AS ++E+A K      S+ + SL+ITA  S   V+   E    +  L  FA E  +   ++
Sbjct:  244 IDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNN-NNDDTNNNPKPPFHRAASYITEALHSLLQD--SSLSPP----SLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILESFEGFDR-------IHIVDFDIGYGGQWASLIQELAGK---RNRSSSAPSLKITAFASPSTVSDEFELRFTEENLRSFAGETGVSFEIE 432          
The following BLAST results are available for this feature:
BLAST of EY755241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
SCL15_ARATH6.499e-4146.26Scarecrow-like protein 15 OS=Arabidopsis thaliana ... [more]
SCL6_ARATH4.842e-2038.58Scarecrow-like protein 6 OS=Arabidopsis thaliana G... [more]
SCL27_ARATH1.612e-1529.20Scarecrow-like protein 27 OS=Arabidopsis thaliana ... [more]
SCL22_ARATH1.970e-1333.98Scarecrow-like protein 22 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionCS12-C1-001-025-G11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755241 ID=EY755241; Name=EY755241; organism=Citrus sinensis; type=EST; length=866bp
CATTGATCATTAGCAGCAATCTGATTTTAATTTCACTTTTAGTTCTAATT
TCAATGTTCCAGCAGCTGACGACGTCGTTTCCTTATCATCATCGACAACT
CAGTATCATAATAACTTCCCTGATCATCATCCTGATGCAGTTTCTAACAA
CGACAACAATATGATCGTCGTGAATAACCTGGGCGGAGGGTTTGAATTTG
ATTATAATTATATAGAAGAGCTTATCAGAGCTGCAGAGTGCCTCGACTCG
AACGAGTTACAAGTGGCTCAGATGATATTGGCCCGCCTCAATCACAGTCA
AAACCTAGTAGGTTCACCACCAGTAGTAGTTGCTGCAGGGAAGCCGCTCC
AAAGAGCCGCGATCTTTTTCAAAGAAGCTCTCAGCTCACTCCTCCTCAGC
CTGCTCAACGGGTTAACTCGGCCGACAAGTCATCTCTCGTCATCTTGGCC
AGAGATCATTCAATCTGTCAGAGCTTACAAGGCCTTCACTGCGATCTCAC
CCATCCCCATGTTCACTCACTTCATAACCACTCAAGCCCTCCTCGAATCC
CTCTTCCTCGACCGCGGATCGGGATCGCCACCGTTGATTCACGTCATAGA
CTTTGACATCGGTTTCGGCGGCCAGTACGCTTCTTTCATGAGAGAAATAG
CCGACAAAGCAGCGGCTGCCCGTCACTCTAACTACTCAACATCACTTCGC
ATCACGGCTGTTGTTTCCGATGATTACGTCACCGAGACAGGACTCGTCAA
AGCCACCCTCTGTCAGTTCGCGCGAGAACTCAGGATAGGCCTCCACGTGG
ACTTCTGGCCCGACCGTNCGTTCGAATGTTGTCTTTCAAGCGGTTAGTTA
ATGGCCGCGAGAAATT
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