EY755227

Overview
NameEY755227
Unique NameEY755227
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO1_SCHPO (Protein sco1 OS=Schizosaccharomyces pombe GN=sco1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.375e-25
Identity = 57/155 (36.77%), Postives = 96/155 (61.94%), Query Frame = 1
Query:  241 FVHYNDERRAVRKGQGENSGPNRVTGPIIGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFF---KKVEEEGDDYLVESS 696
            + ++  E++ V + Q +      +  P +GG F+LID     VT+ +F G + L+YFG+T  PD+ P+++  M+ AIDI+++     + PIF+T DP RD P  +  YL++FN +IVGLTG    I+ + +++RV+F   K ++ + DDYLV+ S
Sbjct:   70 YAYFQHEKKKVLERQNDKVLAT-IGRPQLGGAFSLIDHHGNRVTDNDFKGKFSLIYFGFTRCPDICPDELDKMSAAIDIVNNVVGDVVYPIFITCDPARDPPQEMAEYLEDFNPKIVGLTGSYEEIKDICKKFRVYFSTPKNIDPKKDDYLVDHS 223          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO1_HUMAN (Protein SCO1 homolog, mitochondrial OS=Homo sapiens GN=SCO1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.290e-25
Identity = 53/136 (38.97%), Postives = 89/136 (65.44%), Query Frame = 1
Query:  289 ENSGPNRVTGPIIGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNL-KILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKK-VEEEGDDYLVE 690
            E      +  P++GGPF+L        T+K++LG W+L+YFG+T  PDV PE+++ M + +D +DS   L  + P+F++IDP+RDT   +  Y+KEF+ ++VGLTG    + Q+A+ YRV++    ++E +DY+V+
Sbjct:  124 EKERQRHIGKPLLGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDYIVD 259          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO1_BOVIN (Protein SCO1 homolog, mitochondrial OS=Bos taurus GN=SCO1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.290e-25
Identity = 51/126 (40.48%), Postives = 87/126 (69.05%), Query Frame = 1
Query:  319 PIIGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNL-KILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKK-VEEEGDDYLVE 690
            P++GGPF+L        T+K++LG W+L+YFG+T  PD+ PE+++ M + +D +DS   L  + P+F+TIDP+RDT   +  Y+KEF+ +++GLTG    I Q+A+ +RV++    ++E +DY+V+
Sbjct:  138 PLLGGPFSLTTHTGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIQVVDEIDSIPTLPNLTPLFITIDPERDTKEAIANYVKEFSPKLIGLTGTKEEIDQVARAFRVYYSPGPKDEDEDYIVD 263          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO1_MOUSE (Protein SCO1 homolog, mitochondrial OS=Mus musculus GN=Sco1 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 9.023e-25
Identity = 51/126 (40.48%), Postives = 87/126 (69.05%), Query Frame = 1
Query:  319 PIIGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNL-KILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKK-VEEEGDDYLVE 690
            P++GGPF+L        T+K++LG W+L+YFG+T  PD+ PE+++ M + ++ +DS  +L  + P+F+TIDP+RDT   +  Y+KEF+ ++VGLTG    I  +A+ YRV++    ++E +DY+V+
Sbjct:  117 PLLGGPFSLTTHNGEPKTDKDYLGQWVLIYFGFTHCPDICPEELEKMIEVVEEIDSIPSLPNLTPLFITIDPERDTKEAIATYVKEFSPKLVGLTGTKEEIDGVARAYRVYYSPGPKDEDEDYIVD 242          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO1_YEAST (Protein SCO1, mitochondrial OS=Saccharomyces cerevisiae GN=SCO1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.429e-24
Identity = 61/175 (34.86%), Postives = 97/175 (55.43%), Query Frame = 1
Query:  250 YNDERRAVRKGQGENSGPNRVTGPIIGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVE--EEGDDYLVESSTTCT**TPAWXL*DVLGLNHWQRT 768
            +N E+R +   Q E         P +GGPF L D      TEKN LG + ++YFG+++ PD+ P+++  +   ++ L SK  + + P+F+T DP RD+PA L+ YL +F+  I+GLTG    ++   ++YRV+F      + G DYLV+ S       P     D LG N+ ++T
Sbjct:   91 FNREKRRLET-QKEAEANRGYGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKNACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKT 264          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO22_RICBR (SCO2-like protein RBE_0699 OS=Rickettsia bellii (strain RML369-C) GN=RBE_0699 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.849e-24
Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 1
Query:  325 IGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEEEGD---DYLVESST 699
            IGG F LID    L       G   L+YFG+TS PD+ P  +  + KA++IL   K + I+P+F+TIDP RDTPA L+ YLK F+ + +GLTG    IR++A +++V++ K   E D   DY+++ S+
Sbjct:   47 IGGDFELIDQNGELFNSDELKGKLSLIYFGFTSCPDICPTSLNKITKAVEILSENK-IDIVPVFITIDPSRDTPAVLKEYLKHFHPKFIGLTGDEKQIREVADKFKVYYAKAASENDNDQDYMLDHSS 173          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO2_YEAST (Protein SCO2, mitochondrial OS=Saccharomyces cerevisiae GN=SCO2 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.639e-24
Identity = 60/176 (34.09%), Postives = 99/176 (56.25%), Query Frame = 1
Query:  238 TFVHYNDERRAVRKGQGENSGPNRVTGPI-IGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEE--EGDDYLVESSTTCT**TPAWXL*DVLGLNH 756
            T+ + + +RR +   +  ++  NR  G + +GGPF L D   +  TE+N  G + +LYFG++  PD+ PE++  +   I  LD K ++KI P+F++ DP RDTP  L+ YL +F+  I+GLTG    ++ + ++Y+V+F    +     DYLV+ S       P     D LG N+
Sbjct:   93 TYAYLSRKRRLLETEKEADA--NRAYGSVALGGPFNLTDFNGKPFTEENLKGKFSILYFGFSHCPDICPEELDRLTYWISELDDKDHIKIQPLFISCDPARDTPDVLKEYLSDFHPAIIGLTGTYDQVKSVCKKYKVYFSTPRDVKPNQDYLVDHSIFFYLIDPEGQFIDALGRNY 266          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO22_RICCN (SCO2-like protein RC0895 OS=Rickettsia conorii GN=RC0895 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.103e-22
Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  325 IGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEEEGDD--YLVESST 699
            IGG F LID    +       GN  L+YFG+TS PD+ P  +  M + ++IL+  K + ILP+F+TIDP+RDTP  L+ YLK F+ + +GLTG    I+ +  +++VF+ +V  + DD  Y+++ S+
Sbjct:   49 IGGDFELIDQNGEIFNSDKLKGNLSLIYFGFTSCPDICPTSLNKMTEIVEILNKHK-IDILPVFITIDPKRDTPIALKEYLKHFHPKFIGLTGNEQQIKDVTDKFKVFYARVHGDDDDPNYMLDHSS 174          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO22_RICFE (SCO2-like protein RF_0960 OS=Rickettsia felis GN=RF_0960 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.457e-22
Identity = 51/127 (40.16%), Postives = 80/127 (62.99%), Query Frame = 1
Query:  325 IGGPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNLKILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKKVEEEGDD--YLVESST 699
            IGG F LID    +       GN  L+YFG+TS PD+ P  +  M + ++IL+  K + ILP+F+TIDP+RDTP  L+ YLK F+ + +GLTG    I+ +  +++VF+ +V  + DD  Y+++ S+
Sbjct:   49 IGGDFELIDQNGEIFNSDELKGNLSLIYFGFTSCPDICPTSLNKMTEIVEILNKHK-IDILPVFITIDPKRDTPIVLKEYLKHFHPKFIGLTGNEQQIKGVTDKFKVFYARVNGDDDDPNYMLDHSS 174          
BLAST of EY755227 vs. ExPASy Swiss-Prot
Match: SCO2_DANRE (Protein SCO2 homolog, mitochondrial OS=Danio rerio GN=sco2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.474e-22
Identity = 46/124 (37.10%), Postives = 83/124 (66.94%), Query Frame = 1
Query:  331 GPFTLIDTENRLVTEKNFLGNWILLYFGYTSSPDVGPEQVQMMAKAIDILDSKKNL-KILPIFVTIDPQRDTPAHLRAYLKEFNSRIVGLTGPVGAIRQMAQEYRVFFKK-VEEEGDDYLVESS 696
            G F L+D   +  T+++FLG+W+LLYFG+T  PD+ P++++ +   + ILD   +L  + P+F+T+DP+RD  + +  Y+K+F+ R+VGLTG    ++Q  +++RV+     ++E  DY+V+ S
Sbjct:  114 GDFHLLDHTGQRRTKRDFLGHWVLLYFGFTHCPDICPDELEKLTSVVHILDKDPSLPSVQPLFITVDPERDDVSAMARYVKDFHPRLVGLTGSAEEVKQAGRDFRVYASNGPKDEDGDYIVDHS 237          
The following BLAST results are available for this feature:
BLAST of EY755227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SCO1_SCHPO2.375e-2536.77Protein sco1 OS=Schizosaccharomyces pombe GN=sco1 ... [more]
SCO1_HUMAN5.290e-2538.97Protein SCO1 homolog, mitochondrial OS=Homo sapien... [more]
SCO1_BOVIN5.290e-2540.48Protein SCO1 homolog, mitochondrial OS=Bos taurus ... [more]
SCO1_MOUSE9.023e-2540.48Protein SCO1 homolog, mitochondrial OS=Mus musculu... [more]
SCO1_YEAST3.429e-2434.86Protein SCO1, mitochondrial OS=Saccharomyces cerev... [more]
SCO22_RICBR5.849e-2442.19SCO2-like protein RBE_0699 OS=Rickettsia bellii (s... [more]
SCO2_YEAST7.639e-2434.09Protein SCO2, mitochondrial OS=Saccharomyces cerev... [more]
SCO22_RICCN1.103e-2240.16SCO2-like protein RC0895 OS=Rickettsia conorii GN=... [more]
SCO22_RICFE2.457e-2240.16SCO2-like protein RF_0960 OS=Rickettsia felis GN=R... [more]
SCO2_DANRE5.474e-2237.10Protein SCO2 homolog, mitochondrial OS=Danio rerio... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-025-F06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755227 ID=EY755227; Name=EY755227; organism=Citrus sinensis; type=EST; length=896bp
CCCATATTTTGCTTTCTATTCTTTTCCTCCAAGCACCGCTTCAGACAGCC
GCTCAATCTTATTCGAAGGTTTGATTTATCTAAGAGAACTCAGTCTTGTA
GCTACACGAAATCGTCAAGACAGAGTCATAGAAACCCAGCTGATTATTTT
TTATCGCCTCAAGAGACGAAAGCTTCTCGCTCGTGGAGTACTTATGTTAT
TCCAGCTGGTGGTTTACTGGGATTAGCTGGAATAGCTACTTTTGTCCATT
ATAATGATGAACGAAGAGCTGTGAGGAAAGGACAGGGCGAGAACTCTGGT
CCCAATAGGGTGACGGGTCCAATTATAGGTGGTCCATTCACTCTAATTGA
TACAGAGAATCGTCTAGTAACTGAAAAGAACTTTCTAGGGAACTGGATTC
TTCTGTACTTTGGCTATACATCATCCCCTGATGTTGGGCCAGAGCAAGTC
CAGATGATGGCCAAGGCTATTGATATATTAGATTCAAAAAAGAATCTTAA
GATTTTACCAATATTTGTCACCATCGATCCACAGCGTGATACTCCTGCAC
ACCTACGTGCTTACCTTAAAGAATTTAACTCAAGAATAGTGGGATTAACG
GGACCTGTTGGTGCTATAAGGCAGATGGCTCAGGAATACCGTGTTTTCTT
TAAGAAAGTTGAAGAGGAAGGCGATGATTATCTTGTAGAGTCTTCCACAA
CATGTACTTGATGAACCCCAGCTTGGNAGTTGTGAGATGTTTTGGGGTTG
AATCACTGGCAGAGAACTAGCAGAAGAAATTTCGAAGGAAATGAAGAAAG
CATCAACTTATTTTNCCAATACAATGCANAGGAACTAGCCGGTTTATACT
GGAAGAACTAAAGAAACCCTCAACTTATGATTGACGTTTCCATATG
back to top