EY729445

Overview
NameEY729445
Unique NameEY729445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 7.554e-59
Identity = 103/116 (88.79%), Postives = 112/116 (96.55%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 651
            EGGFF AIMSFP NYPNSPPTV+FT++IWHPNVYPDGRVCISILHPPGDDP+GYELASERW PVHTVESI+LSIISMLSGPNDESPANVEAAKEWR++RD+FKKKV RCVR+SQEM
Sbjct:   50 EGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEM 165          

HSP 2 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 33/45 (73.33%), Postives = 36/45 (80.00%), Query Frame = 2
Query:   65 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTL*GYGGMHVFLS 199
            DLCK+PV GFSAGLVDE NIFEWSVTIIGPPDTL   G  +  +S
Sbjct:   15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMS 59          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.289e-58
Identity = 102/116 (87.93%), Postives = 112/116 (96.55%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 651
            EGGFFNAIM+FP NYPNSPPTV+FT+++WHPNVY DGRVCISILHPPGDDP+GYELASERW PVHTVESI+LSIISMLSGPNDESPANVEAAKEWRD+RD+FKKKV RCVR+SQEM
Sbjct:   50 EGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEM 165          

HSP 2 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 2
Query:   65 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTL 166
            DLCK+PV GFSAGLVDE NIFEWSVTIIGPPDTL
Sbjct:   15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTL 48          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.174e-57
Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 654
            EGGFFNAIMSFP NYP SPPTV FT+E+WHPNVY DG+VCISILHPPGDDP+GYELASERW PVHTVESIVLSIISMLSGPNDESPANVEAAKEWRD R +F+KKV RCVRRSQEML
Sbjct:   51 EGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.021e-55
Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 654
            +GG+FNAIMSFP NYPNSPPTV+FT+E+WHPNVYPDGRVCISI HPPGDDPNGYELASERW PVHTVESIVLSIISMLS PNDESPAN+EAAK+WR+++D+FKKKV R VR+SQEML
Sbjct:   53 DGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML 168          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 4.024e-44
Identity = 80/117 (68.38%), Postives = 99/117 (84.62%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 654
            EGGFF+A +SFP +YP  PP +KFTTEIWHPNV+P+G VCISILHPPGDD  GYE A ERW+PVH+ E+I++S+ISMLS PNDESPAN++AAKE+R+   +FKK+V R VRRS EM+
Sbjct:   51 EGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMI 167          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.699e-40
Identity = 76/115 (66.09%), Postives = 91/115 (79.13%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 648
            EGGFF AI+ FP +YP  PP +KF +EIWHPN+  +G VCISILH PGDD  GYE   ERW+PVHTVE+I+LS+ISML+ PN ESPANV+AAK  R+   +FKKKV +CVRRSQE
Sbjct:   49 EGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQE 163          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 648
            EGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE   ERW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   51 EGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 648
            EGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE   ERW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   51 EGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 4.604e-40
Identity = 75/116 (64.66%), Postives = 93/116 (80.17%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 648
            EGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE   ERW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   51 EGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
BLAST of EY729445 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.985e-39
Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = 1
Query:  304 EGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 648
            EGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE    RW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   51 EGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
The following BLAST results are available for this feature:
BLAST of EY729445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
UBC13_ARATH7.554e-5988.79Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]
UBC7_ARATH1.289e-5887.93Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis t... [more]
UBC14_ARATH3.174e-5788.03Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis ... [more]
UBC7_WHEAT1.021e-5584.62Ubiquitin-conjugating enzyme E2 7 OS=Triticum aest... [more]
UBC15_SCHPO4.024e-4468.38Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UBC7_CAEEL2.699e-4066.09Probable ubiquitin-conjugating enzyme E2 7 OS=Caen... [more]
UB2G1_RAT4.604e-4064.66Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norve... [more]
UB2G1_MOUSE4.604e-4064.66Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus... [more]
UB2G1_HUMAN4.604e-4064.66Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]
UB2G1_MACFA2.985e-3963.79Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fasci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-704-017-A09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729445 ID=EY729445; Name=EY729445; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCTAAAATCATGGCGGCATCTCAGGCAAGTCTCCTCTTGC
AAAAACAACTAAAAGATCTTTGTAAGAACCCTGTTGCTGGGTTTTCTGCC
GGGTTGGTGGATGAGACAAATATCTTTGAATGGAGTGTTACAATTATTGG
ACCACCTGATACTCTTTAAGGCTATGGAGGCATGCATGTGTTTCTCTCTT
GTGATTTCAGGATGCTGTCCAACATCATATTCTTGAATGCATTTAATGTT
TGGTTTGAATGGTCTTGTTGGGTTGCAGCTATATAACGTATTTGAGATGT
TGTGAGGGGGGATTTTTCAATGCCATTATGAGCTTTCCATCAAACTACCC
TAATAGCCCACCTACAGTGAAGTTTACAACAGAGATTTGGCATCCTAATG
TCTATCCGGATGGGCGTGTCTGCATATCAATCCTTCATCCTCCAGGTGAC
GACCCTAATGGATATGAGCTTGCAAGTGAGCGCTGGATGCCTGTTCATAC
TGTTGAAAGTATCGTTTTGAGTATCATATCAATGCTTTCCGGTCCTAATG
ATGAATCTCCTGCAAATGTCGAAGCTGCAAAAGAATGGAGAGACAGGAGA
GATGACTTCAAGAAGAAAGTAGGCCGCTGTGTGAGAAGATCACAAGAAAT
GTTGTAATCCCACTGCAGGCACTCTTTTTTTCTCTAACTATGTGTTTGTA
CGGGAAATGTCTTGATTTAATTGTGTGGGGGGAACTGGGTTCTGTGGGTT
ATGGTCATGTGGCTGGTCTTGTGTAGACTGGCATTTGGAAATTCTCTCAA
CCATCTTCTCCCTTTCCTCTGCATGGTCAAGTCCTCGTAAGACTGGGAAC
ATTCTGTATTCAAAACGCGTTTGGGTGATTTAAGCCCAAAGTCTGGCCCT
CCTTAATTCGGG
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