EY729444
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL5E_ARATH (Putative RING-H2 finger protein ATL5E OS=Arabidopsis thaliana GN=ATL5E PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.142e-26 Identity = 51/86 (59.30%), Postives = 67/86 (77.91%), Query Frame = 2 Query: 200 ITLPPPAIVVN-GLDRLTIESYPKTLLGESGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNSP 454 + LP PA V GLDR IESYP+ +LG+S RLP+PN+ CSICL +YE ++ +R IPECNH FH +C+D+WLR +A+CP+CRNSP Sbjct: 54 LDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSP 139
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL1E_ARATH (RING-H2 finger protein ATL1E OS=Arabidopsis thaliana GN=ATL1E PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23 Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 2 Query: 164 RRRRPITEISTAITLPPPAIVVNGLDRLTIESYPKTLLGESGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNS 451 RR+ P +V GLD+ TIESY K LGES RLP N C ICL EY K+T+R +PEC+H FH +CID+WL++++SCPVCRNS Sbjct: 202 RRQNAAITARNTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 297
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL2I_ARATH (RING-H2 finger protein ATL2I OS=Arabidopsis thaliana GN=ATL2I PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.413e-18 Identity = 42/77 (54.55%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 224 VVNGLDRLTIESYPKTLLGESGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNSP 454 VV GLD TI+SYPK L E+ + C+ICLG+Y+ K LR +P+CNH FH +CID WLR+N +CPVCR SP Sbjct: 118 VVPGLDEDTIQSYPKILYSEAKG--PTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSP 192
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL2M_ARATH (RING-H2 finger protein ATL2M OS=Arabidopsis thaliana GN=ATL2M PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18 Identity = 44/83 (53.01%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 224 VVNGLDRLTIESYPK------TLLGESGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNSP 454 VV GLD+ I SYPK T S D TCSICL EY+ + LR +PEC HYFH C+D WL++N SCPVCRNSP Sbjct: 101 VVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSP 183
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL3K_ARATH (RING-H2 finger protein ATL3K OS=Arabidopsis thaliana GN=ATL3K PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 2 Query: 221 IVVNGLDRLTIESYPK---------TLLGESGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNSP 454 +VV GLD I SYPK + G+ + + TCSICL EY ++ LR +PEC HYFH C+D WL++N SCPVCRNSP Sbjct: 95 VVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSP 181
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL1A_ARATH (RING-H2 finger protein ATL1A OS=Arabidopsis thaliana GN=ATL1A PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 47/147 (31.97%), Postives = 70/147 (47.62%), Query Frame = 2 Query: 38 TSKGTKYAI--IIGVGVPGTXXXXXXXXXXXXRKVGSGHESQLGRRRRPITEISTAITLPPPAIVVNGLDRLTIESYP-------KTLLGESGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNS 451 +S GT + I I +G+ T + + H+ + RRRR ++ + + P V GLD I + P + GE + N CS+CL E++ + LR IP C H FH +CID WL+ NA+CP+CR S Sbjct: 35 SSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSD-QNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQ--SKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTS 178
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL5D_ARATH (Putative RING-H2 finger protein ATL5D OS=Arabidopsis thaliana GN=ATL5D PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.788e-13 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 2 Query: 221 IVVNGLDRLTIESYPKTLLGE---SGRLPKPNDNT--CSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNSP 454 + V GL I+ +PK E S L K + T CSICL +Y+ +R +P+CNH FH C+D WLR++ +CPVCR SP Sbjct: 92 VEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSP 174
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL4D_ARATH (Putative RING-H2 finger protein ATL4D OS=Arabidopsis thaliana GN=ATL4D PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 224 VVNGLDRLTIESYPKTLLGESGRLPKPNDNT-CSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCR 445 V G+D+ IES+P L E N C+ICL E+E ++ LR +P C+H FHA CID+WL ++CPVCR Sbjct: 88 VRRGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCR 162
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL5H_ARATH (RING-H2 finger protein ATL5H OS=Arabidopsis thaliana GN=ATL5H PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12 Identity = 34/80 (42.50%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 218 AIVVNGLDRLTIESYPKTLLGE--SGRLPKPNDNTCSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCRNS 451 A V GLD TIE++P + E + ++ K C+ICL E+E +TLR +P+C+H FH CI WL+ + +CPVCR + Sbjct: 90 ATVARGLDAETIETFPTFVYSEVKTQKIGK-GALECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTN 168
BLAST of EY729444 vs. ExPASy Swiss-Prot
Match: ATL4C_ARATH (Putative RING-H2 finger protein ATL4C OS=Arabidopsis thaliana GN=ATL4C PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 2 Query: 233 GLDRLTIESYPKTLLGESGRLPKPNDNT-CSICLGEYEPKQTLRTIPECNHYFHAECIDKWLRMNASCPVCR 445 GL++ IES+P L E L C+ICL E+E ++TLR +P C+H FHA CID WL ++CPVCR Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165 The following BLAST results are available for this feature:
BLAST of EY729444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729444 ID=EY729444; Name=EY729444; organism=Citrus sinensis; type=EST; length=696bpback to top |