EY729438

Overview
NameEY729438
Unique NameEY729438
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length908
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729438 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.287e-14
Identity = 40/116 (34.48%), Postives = 68/116 (58.62%), Query Frame = -2
Query:  143 HIKLDPRAHDILATSLRAVAWSGRLVVIGFARGQIPTLKAKYLLFKNMSVIGLQWSEYRDRQPEKIAVAQARLLRMREQGLIRPRLAAGLPLEEVAIALQALEQGRATGKYVVHME 490
            ++ +D    D+   SLR++AW GR+VV+GFA G I ++ +  LL KN+S +GL W  Y+ +     + + +  L+  +QGLI P   A   LE+V  A   + Q ++TGK ++ ++
Sbjct:  235 NVAIDMVGGDVFLDSLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTALQYCQQGLIHPHTGAVFKLEKVNDAFLHVMQRKSTGKVLLSLK 350          
BLAST of EY729438 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14
Identity = 38/116 (32.76%), Postives = 68/116 (58.62%), Query Frame = -2
Query:  143 HIKLDPRAHDILATSLRAVAWSGRLVVIGFARGQIPTLKAKYLLFKNMSVIGLQWSEYRDRQPEKIAVAQARLLRMREQGLIRPRLAAGLPLEEVAIALQALEQGRATGKYVVHME 490
            ++ +D    D+   SLR++AW GR+VV+GFA G I ++ +  LL KN+S +GL W  Y+ +     + + +  ++  +QGLI P   A   LE++  A   + Q ++TGK ++ ++
Sbjct:  235 NVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKINDAFLHVMQRKSTGKVLLSLK 350          
BLAST of EY729438 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.097e-13
Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = -2
Query:  143 HIKLDPRAHDILATSLRAVAWSGRLVVIGFARGQIPTLKAKYLLFKNMSVIGLQWSEYRDRQPEKIAVAQARLLRMREQGLIRPRLAAGLPLEEVAIALQALEQGRATGKYVVHME 490
            ++ +D    DI   +LR++A+ GR+VV+GFA G I ++ A  LL KN+S +GL W  YR +     + + +  L+  ++G I+P +     LEEV  A   + Q ++TGK ++ ++
Sbjct:  234 NVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIASVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVNDAFLHVTQRKSTGKVLLSLK 349          
BLAST of EY729438 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.855e-12
Identity = 34/106 (32.08%), Postives = 61/106 (57.55%), Query Frame = -2
Query:  149 DILATSLRAVAWSGRLVVIGFARGQIPTLKAKYLLFKNMSVIGLQWSEYRDRQPEKIAVAQARLLRMREQGLIR-PRLAAGLPLEEVAIALQALEQGRATGKYVVH 463
            D+    L+ +AW+G ++ +GFA G+IP + A  LL KN S +GL W  +    P+ +  +  + L   + G ++ P ++A   L++V  A Q + Q ++TGK V++
Sbjct:  257 DVFKQCLKCIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPYISASFGLDKVNEAFQMILQRKSTGKVVIN 362          
The following BLAST results are available for this feature:
BLAST of EY729438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
QORL2_RAT3.287e-1434.48Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_MOUSE7.324e-1432.76Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
QORL2_BOVIN8.097e-1333.62Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QORL2_NEMVE6.855e-1232.08Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-017-A01-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729438 ID=EY729438; Name=EY729438; organism=Citrus sinensis; type=EST; length=908bp
TTGCGCCCAGGCGAAATGGGGCGACGCCCTGTGCGTGGCCAGGGAATGCG
TACAGCGAACCGCCTAGCAGCGCGGCCATGACTACGGTTGTCTGTTTCAT
GGGATATGTCCTGCCTTCTCAGATTGGGCGATGCGAGGGGGATTCCATAT
GGACGACGTACTTGCCGGTGGCGCGGCCTTGCTCCAGTGCCTGCAGGGCG
ATGGCCACCTCTTCCAGTGGCAGGCCGGCGGCCAACCTGGGACGGATCAA
TCCTTGTTCGCGCATGCGCAGCAGCCGCGCCTGCGCCACCGCGATCTTCT
CGGGCTGGCGGTCGCGGTATTCGCTCCATTGCAGACCGATGACGCTCATG
TTCTTGAACAGCAGATATTTCGCCTTCAGCGTCGGGATCTGGCCCCGCGC
GAAGCCGATCACCACCAGCCTGCCGGACCAGGCCACGGCGCGCAGCGAAG
TCGCTAATATATCGTGCGCCCGGGGATCGAGCTTGATGTGTCTCGCCTCT
TCGCTCGGTGTGCCGCTCTCGGCCCTTGTCGGCGGGGGCTCCCGCCCTTT
CCGCCGCTCGGCGTTCCGGCGTCCTGACTCCCCCCGTCGGGGCGGAGGCC
GTGGGGGAGGTGGCCCCGGCGGACTGTTTGAGGTGATGGGTTGTTGCGTG
CGTGCATGGCGGTGCGCTCTGTCGCCGTCGCTGGCTGCCGGTTGTCCCCG
CCCCCTCGTCCTCTCCTCCCCCCACTAGTCCTGTCCGCAGCGCTCCTTGT
GTGTGCGCGGTGCCGTGCTCACGCTCCTTTATGTTGGTGAGTGTGCCTTG
CTGCTGGCCCCTCGCGCGACGCCTCGCGTGCATCGCGTGTCGCTTGGTTA
GATGGTCTTTGTTCGTTGCTTCGCGCGTTTGTTTCGGCCGTCTTCCTTTT
GTCCGCGC
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