EY729434

Overview
NameEY729434
Unique NameEY729434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length288
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9913 contig Csv1_Contig9913:1..288. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
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BLAST of EY729434 vs. ExPASy Swiss-Prot
Match: PRTS_SERMA (Extracellular serine protease OS=Serratia marcescens PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.641e-13
Identity = 42/101 (41.58%), Postives = 54/101 (53.47%), Query Frame = -1 
Query:    1 AGNPVYESILRSDSVAAAQQGFQQLSGEIYPAIDTMLINDSRQLRDAVGERLRH-------TPVTGESN-VWVKALGSWGKTDSRSDTAGYTTSLGGMLAG 279
            AG+P+YES L   S    QQ  +QLSG+I+  + +  IN+SR LRD   ERLR        T +  + N  W K LGSWG      +  GY TS  G+L G
Sbjct:  706 AGHPIYESFLGFTSARELQQATRQLSGQIHADMASAQINESRYLRDTATERLRQAEGRRTATDIKADDNGAWAKLLGSWGHASGNDNATGYQTSTYGVLLG 806
[Close]
BLAST of EY729434 vs. ExPASy Swiss-Prot
Match: PRTT_SERMA (Extracellular serine protease OS=Serratia marcescens PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.370e-12
Identity = 38/101 (37.62%), Postives = 52/101 (51.49%), Query Frame = -1 
Query:    1 AGNPVYESILRSDSVAAAQQGFQQLSGEIYPAIDTMLINDSRQLRDAVGERLRHTP--------VTGESNVWVKALGSWGKTDSRSDTAGYTTSLGGMLAG 279
            AG+P+YES L   +    QQ  +QLSG+I+  + +  IN+SR LRD   ERLR              ++  W K LG+WG      +  GY TS  G+L G
Sbjct:  706 AGHPIYESFLGFTTARELQQATRQLSGQIHADMASAQINESRYLRDTATERLRQADGRRTASDIKADDNGAWAKLLGNWGHASGNDNATGYQTSTYGVLLG 806
The following BLAST results are available for this feature:
BLAST of EY729434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PRTS_SERMA1.641e-1341.58Extracellular serine protease OS=Serratia marcesce... [more]
PRTT_SERMA2.370e-1237.62Extracellular serine protease OS=Serratia marcesce... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-H09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729434 ID=EY729434; Name=EY729434; organism=Citrus sinensis; type=EST; length=288bp
ACCCGCCAGCATGCCACCCAGTGAGGTGGTGTAGCCCGCCGTGTCGCTGC
GGCTGTCGGTCTTGCCCCAACTGCCGAGCGCCTTGACCCACACATTGCTT
TCACCGGTAACCGGCGTATGGCGCAGGCGCTCGCCGACGGCATCACGTAG
TTGGCGACTATCGTTGATCAGCATGGTGTCGATGGCCGGATAGATTTCCC
CCGACAGTTGCTGGAAGCCTTGTTGCGCGGCGGCCACGGAGTCCGAACGC
AGGATGCTTTCGTACACCGGGTTGCCCGCGCCCAATTG
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