EY729432

Overview
NameEY729432
Unique NameEY729432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY729432 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 153.68 bits (387), Expect = 1.056e-36
Identity = 103/218 (47.25%), Postives = 119/218 (54.59%), Query Frame = 1 
Query:  145 DPDFSGS--ARFDKPRISAARVIGASTASFSGVSSLIFRFPPNFVRQLSTKARRNCSNIGVAQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------VEITSGDDIALV--DGLKN-VQLEALADLKNEASFLSSDGSPCIHAGERLGRGIVTDAXTXPVVNTSAYFFKKTAELIDFKEKRRASFEYWRYGTPQLVSLKRK 723
            DPD  GS      + R+ A+  I +S    +G+SS I RFPPNFVRQLS KARRNCSNIGVAQI                                                  V + S D+  +V  +G++  +    L D K+  SFLSSDGS  +HAGERLGRGIVTDA T PVVNTSAYFFKKTAELIDFKEKR  SFEY RYG P  V L+ K
Sbjct:   25 DPDLVGSPVGGSSRRRVHASAGISSSFTGDAGLSSRILRFPPNFVRQLSIKARRNCSNIGVAQIVAAKWSNNPSSALPSAAAAAATSSASAVSSAASAAAASSAAAAPVAAAPPVVLKSVDEEVVVAEEGIREKIGSVQLTDSKH--SFLSSDGSLTVHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRSVSFEYGRYGNPTTVVLEDK 240
The following BLAST results are available for this feature:
BLAST of EY729432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
METB_ARATH1.056e-3647.25Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729432 ID=EY729432; Name=EY729432; organism=Citrus sinensis; type=EST; length=770bp
CACGCGTCCGCTTGTGTTCTTATCATAGAAGACCGAGAGAGCAAAGCCGC
CGTTCAATACGACGTCGTAATGGCCGTGTCCTCATGTTCGAGTCAAAAAA
TTTTGTCCTTCTCTTCTTCATGTTCGTCTTTTGAGTGCCGGTCCGATCCC
GACTTCTCGGGCTCCGCTCGGTTTGATAAACCGAGGATCTCGGCGGCGCG
AGTCATTGGAGCCTCGACGGCGTCGTTTAGCGGCGTGTCGTCTCTGATTT
TCAGGTTTCCGCCGAACTTCGTACGCCAGCTTAGCACGAAGGCCAGGAGG
AACTGCAGCAACATCGGCGTGGCGCAAATCGTGGCGGCTTCGTGGTCGAA
CAGTGTGGGTTCCGGCTCTAACTCGGCGGCGGCTACAGCCGCTTCCGCTG
CCCCGGCCCCGCCCGCCCCCGTCGAGATTACGAGCGGCGATGACATCGCG
CTGGTTGACGGATTGAAAAATGTACAGCTGGAAGCCCTCGCTGATTTGAA
AAACGAGGCTTCGTTTTTGAGCTCCGATGGGAGCCCTTGCATTCATGCCG
GTGAAAGATTAGGTCGTGGTATAGTAACAGATGCAATNACTANCCCAGTG
GTGAATACTTCTGCTTACTTCTTTAAGAAAACTGCTGAGCTTATTGATTT
CAAGGAGAAACGTCGTGCAAGTTTTGAATATTGGAGGTATGGAACCCCAC
AACTTGTGTCCTTGAAGAGAAAATATTGCCACTGAGGGGGCTGAATCACT
GTGATTTGGCTTCCGAATGA
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