EY729425

Overview
NameEY729425
Unique NameEY729425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_CRIGR (Post-GPI attachment to proteins factor 3 OS=Cricetulus griseus GN=PGAP3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.234e-16
Identity = 55/185 (29.73%), Postives = 81/185 (43.78%), Query Frame = 1
Query:  232 ALFLLISCTLPALYASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGVDVLLHPSVL*VAFETRIENLLRIYWFMAHLWHP*HELPGLECCFHSRNVELTEK 786
            A  LL++ T+   + S GD +P+Y+ CV +CE+  C GD   +H  F S            +P+Y+    W C  DC+Y CM    G   + G +  ++HGKWPF R   IQEP +   S LN       + +L        A        +   W   + W            FH+R+ +LTEK
Sbjct:    6 ARLLLLTVTVGLAWGSQGDREPVYRDCVLRCEERNCSGD-ALKH--FRS-----------LQPIYMSLAGWTCRDDCKYECMWITVGLYLQEGHRVPQFHGKWPFSRFLFIQEPASAVASLLN---GLASLVMLCRYRASVPASSPMYHTCMAFAWVSLNAWF-------WSTVFHTRDTDLTEK 166          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_MOUSE (Post-GPI attachment to proteins factor 3 OS=Mus musculus GN=Pgap3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.365e-15
Identity = 54/185 (29.19%), Postives = 80/185 (43.24%), Query Frame = 1
Query:  232 ALFLLISCTLPALYASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGVDVLLHPSVL*VAFETRIENLLRIYWFMAHLWHP*HELPGLECCFHSRNVELTEK 786
            A  LL++  +     S GD +P+Y+ CV +CE+  C GD   +H  F S           ++P+Y+    W C  DC+Y CM    G   + G +  ++HGKWPF R   IQEP +   S LN       + +L        A        +   W   + W            FH+R+ +LTEK
Sbjct:    6 APLLLLTLAVGLAGGSQGDREPVYRDCVLRCEERNCSGD-ALKH--FRS-----------RQPIYMSLAGWTCRDDCKYECMWFTVGLYLQEGHRVPQFHGKWPFSRFLFIQEPASAVASLLN---GLASLVMLCRYRASVPASSPMYHTCMAFAWVSLNAWF-------WSTVFHTRDTDLTEK 166          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_DROME (Post-GPI attachment to proteins factor 3 OS=Drosophila melanogaster GN=CG3271 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.954e-15
Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 1
Query:  211 MAHSHLIALFLLISCTLPALYASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPID--GPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSI 609
            M+   L A+ LL+   + A  AS+GD    +  C + CE+T C           S+DG  I      + Q+ ++ R  QW C+ +C+Y CM        + G    +++GKWPF R+ G+QEP +V  S LN  +
Sbjct:    1 MSSRSLSAIVLLLGALVTACLASNGDRTQFFHNCRQNCERTNC-----------SADGLEIQEQAVKFYQQSVFDRLFQWSCADECQYGCMWRTVFAFFERGWPIPQFYGKWPFLRLLGMQEPASVIFSCLNFVV 124          

HSP 2 Score: 26.9498 bits (58), Expect = 1.954e-15
Identity = 12/39 (30.77%), Postives = 22/39 (56.41%), Query Frame = 2
Query:  638 ILLYYKLPLRPE*KTYYEYTGLWHIYGIPSMNSLVWSAV 754
            +L  ++  +RP+   Y     L HI+ + S+N  +WSA+
Sbjct:  128 LLRKFRREVRPDSPCYM----LTHIFAVTSLNGWIWSAI 162          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_HUMAN (Post-GPI attachment to proteins factor 3 OS=Homo sapiens GN=PGAP3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.971e-15
Identity = 54/187 (28.88%), Postives = 77/187 (41.18%), Query Frame = 1
Query:  226 LIALFLLISCTLPALYASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGVDVLLHPSVL*VAFETRIENLLRIYWFMAHLWHP*HELPGLECCFHSRNVELTEK 786
            L A  +L++        S GD +P+Y+ CV QCE+  C G     H  F S           ++P+Y+    W C  DC+Y CM    G   + G K  ++HGKWPF R    QEP +   S LN       + +L        A        +   W   + W            FH+R+ +LTEK
Sbjct:    4 LAARLVLLAGAAALASGSQGDREPVYRDCVLQCEEQNCSGG-ALNH--FRS-----------RQPIYMSLAGWTCRDDCKYECMWVTVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVASFLN---GLASLVMLCRYRTFVPASSPMYHTCVAFAWVSLNAWF-------WSTVFHTRDTDLTEK 166          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_XENTR (Post-GPI attachment to proteins factor 3 OS=Xenopus tropicalis GN=pgap3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.574e-14
Identity = 39/109 (35.78%), Postives = 52/109 (47.71%), Query Frame = 1
Query:  274 ASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALN 600
            AS GD +P+Y+ CV  CE+  C G +                 +  ++PLY+R   W C  DCRY CM        K G +  ++HGKWPF R    QEP +   S LN
Sbjct:   15 ASRGDREPVYRDCVTLCERNNCTGSRLTD--------------FRAEQPLYMRVTGWTCLDDCRYQCMWYTVSLYLKEGHEVPQFHGKWPFSRFLFFQEPASALASFLN 109          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_XENLA (Post-GPI attachment to proteins factor 3 OS=Xenopus laevis GN=pgap3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 41/109 (37.61%), Postives = 55/109 (50.46%), Query Frame = 1
Query:  274 ASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALN 600
            AS GD +P+Y+ CV  C++  C G   F+  +F +           Q+PLY+R   W C  DCRY CM        K G +  ++HGKWPF R    QEP +   S LN
Sbjct:   15 ASRGDREPVYRDCVTVCDQNNCTG---FRLRDFRA-----------QQPLYMRLTGWTCLDDCRYKCMWYTVSLYLKEGHEVPQFHGKWPFSRFLFFQEPASALASFLN 109          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_BOVIN (Post-GPI attachment to proteins factor 3 OS=Bos taurus GN=PGAP3 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.362e-14
Identity = 52/185 (28.11%), Postives = 77/185 (41.62%), Query Frame = 1
Query:  232 ALFLLISCTLPALYASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGVDVLLHPSVL*VAFETRIENLLRIYWFMAHLWHP*HELPGLECCFHSRNVELTEK 786
            A  +L++        S GD +P+Y+ CV +CE+  C G    +H  F S           ++P+Y+    W C  DC+Y CM    G   + G K  ++HGKWPF R    QEP +   S LN       + +L        A        +   W   + W            FH+R+ +LTEK
Sbjct:    6 ARLVLLAGAAALASGSQGDREPVYRDCVLRCEERNCSGG-ALKH--FRS-----------RQPIYMSLAGWTCRDDCKYECMWVTVGLYLQEGQKVPQFHGKWPFSRFLCFQEPASAVASFLN---GLASLVMLCRYRTSVPASSPMYPTCVAFAWVSLNAWF-------WSTVFHTRDTDLTEK 166          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PER1_SCHPO (Protein PER1 homolog OS=Schizosaccharomyces pombe GN=SPAC823.07 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 42/120 (35.00%), Postives = 58/120 (48.33%), Query Frame = 1
Query:  274 ASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALNLSIQFHGVDVL 633
            AS GD  P+Y  CV +C +  C G+         SD   +        PL L+  +WDC S+C Y C +  E           +YHGKW F RV+GIQE  +V  S LN  I ++G  ++
Sbjct:   24 ASAGDLHPVYVSCVNRCIENKCHGNP--------SDTSKL--------PLDLKLFRWDCGSNCGYECEITAENYFAAHNLPSQQYHGKWYFIRVFGIQELFSVFFSMLNFMIHYNGYHIM 127          
BLAST of EY729425 vs. ExPASy Swiss-Prot
Match: PGAP3_DANRE (Post-GPI attachment to proteins factor 3 OS=Danio rerio GN=pgap3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.845e-12
Identity = 37/109 (33.94%), Postives = 50/109 (45.87%), Query Frame = 1
Query:  274 ASDGDADPIYKGCVEQCEKTGCVGDKCFQHCNFSSDGKPIDGPWYLQEPLYLRWKQWDCSSDCRYHCMLAREGEREKVGDKPVKYHGKWPFRRVYGIQEPVAVALSALN 600
            AS GD +P+Y+ CV+ C +  C G +      F S            +P Y+    W C  DCRY CM    G  +  G    ++HGKWPF R    +EP +   S LN
Sbjct:   16 ASQGDKEPVYRDCVKHCVRANCTGARLR---GFQST-----------QPPYMALTGWTCRDDCRYQCMWTTVGLYQAEGYSIPQFHGKWPFARFLCFEEPASALASLLN 110          
The following BLAST results are available for this feature:
BLAST of EY729425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PGAP3_CRIGR1.234e-1629.73Post-GPI attachment to proteins factor 3 OS=Cricet... [more]
PGAP3_MOUSE1.365e-1529.19Post-GPI attachment to proteins factor 3 OS=Mus mu... [more]
PGAP3_DROME1.954e-1531.85Post-GPI attachment to proteins factor 3 OS=Drosop... [more]
PGAP3_HUMAN3.971e-1528.88Post-GPI attachment to proteins factor 3 OS=Homo s... [more]
PGAP3_XENTR2.574e-1435.78Post-GPI attachment to proteins factor 3 OS=Xenopu... [more]
PGAP3_XENLA3.362e-1437.61Post-GPI attachment to proteins factor 3 OS=Xenopu... [more]
PGAP3_BOVIN3.362e-1428.11Post-GPI attachment to proteins factor 3 OS=Bos ta... [more]
PER1_SCHPO1.081e-1235.00Protein PER1 homolog OS=Schizosaccharomyces pombe ... [more]
PGAP3_DANRE1.845e-1233.94Post-GPI attachment to proteins factor 3 OS=Danio ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-704-016-G09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY729425 ID=EY729425; Name=EY729425; organism=Citrus sinensis; type=EST; length=924bp
CACGCGTCCGCTCGACTCGAGTCTAAAGTTTCTCCCTTCACTCAGACCGT
CTCGACTCGCTCCTTTTCTCTTCTCTCTCCCACCGAGTCTAAATTCCAAC
AACTCAACTCCTCACTCGCTCTTGTAACAAAACTCAAATCACCGGAGCGT
CGATTATGTAGAAAATCTCTTAAAACGTTCCTCTGTTGACTTCCACTTTA
CACGATTCAGATGGCTCACAGTCACTTAATTGCTCTCTTTCTTTTAATTT
CATGTACGCTTCCAGCTCTCTACGCAAGCGACGGTGACGCTGATCCGATT
TACAAGGGTTGTGTGGAGCAGTGTGAGAAAACTGGATGCGTGGGGGACAA
ATGCTTCCAACACTGTAACTTTTCATCTGATGGAAAACCTATTGATGGGC
CATGGTATCTGCAAGAACCACTCTATCTCCGGTGGAAACAATGGGATTGC
AGCAGTGACTGTCGATATCACTGTATGCTTGCTAGGGAAGGGGAGAGAGA
AAAAGTTGGTGACAAGCCTGTCAAGTATCATGGGAAATGGCCATTCCGCC
GTGTNTACGGAATTCAGGAACCCGTTGCTGTTGCTCTCTCTGCACTCAAT
CTTTCCATACAATTTCATGGGGTGGATGTCCTTCTTCATCCTTCTGTACT
ATAAGTTGCCTTTGAGACCAGAATAGAAAACTTATTACGAATATACTGGT
TTATGGCACATCTATGGCATCCCTAGCATGAACTCCCTGGTCTGGAGTGC
TGTTTCCACAGTCGAAATGTTGAATTGACAGAGAAGCTCGATTGTCTTCT
GCTGTAGCATTACTTGGTTTTATTTCATTCTANCATTCTGCGAGCTTTCA
NCGTCAAAAACAAGCTGCTANGGCAAGGTTGCGGCTCCATTGATTGCATT
GTGACACTCACTCTTGTACTGAAT
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