EY729419
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: GMHB_PSEAE (D,D-heptose 1,7-bisphosphate phosphatase OS=Pseudomonas aeruginosa GN=gmhB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.102e-22 Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = -2 Query: 3 LIILDRDGVINQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVVATNQSGLARGLFDMDTLTAIHTKMRRELAAAGG 239 L+ILDRDGVIN DSD ++K+ DEWI +P S++AIARL+QA WTV VATNQSG+ARG +D+ L A+H ++R +A GG Sbjct: 5 LLILDRDGVINLDSDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGG 83
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: GMHB_NEIMB (D,D-heptose 1,7-bisphosphate phosphatase OS=Neisseria meningitidis serogroup B GN=gmhB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.429e-21 Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = -2 Query: 3 VKLIILDRDGVINQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVVATNQSGLARGLFDMDTLTAIHTKMRRELAAAGG 245 +KLIILDRDGVINQD D FVKS DEWI + GS+ A+A LTQA +TV VATNQSG+ R F + LT +H KM R + AGG Sbjct: 1 MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGYTVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGG 81
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: GMHB_NEIMA (D,D-heptose 1,7-bisphosphate phosphatase OS=Neisseria meningitidis serogroup A GN=gmhB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.429e-21 Identity = 51/81 (62.96%), Postives = 60/81 (74.07%), Query Frame = -2 Query: 3 VKLIILDRDGVINQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVVATNQSGLARGLFDMDTLTAIHTKMRRELAAAGG 245 +KLIILDRDGVINQD D FVKS DEWI + GS+ A+A LTQA +TV VATNQSG+ R F + LT +H KM R + AGG Sbjct: 1 MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGYTVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGG 81
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_THIDA (Glycyl-tRNA synthetase beta subunit OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glyS PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.338e-16 Identity = 50/106 (47.17%), Postives = 60/106 (56.60%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-NLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KR+GN+LKKAEGE+GA D +L+ LA + PVDAFF +MV A+DPA+RANRLALL QLH MN+VADISRLA Sbjct: 595 KRVGNILKKAEGEVGASADPGRFVEAAERALFAALDEVAPRAAAAFGSGDYTASLQALAALKAPVDAFFDQVMVNADDPALRANRLALLNQLHRTMNRVADISRLA 700
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_DECAR (Glycyl-tRNA synthetase beta subunit OS=Dechloromonas aromatica (strain RCB) GN=glyS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14 Identity = 47/106 (44.34%), Postives = 58/106 (54.72%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-NLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KR+GN+LKK E + AV D + +L+ LA R PVDAFF D+MV AEDPA+RANRL LL +LH MNQVADIS+L+ Sbjct: 606 KRVGNILKKVENAVEAVVDNALLKEAAEIALHDALVEVVPQADAAFVTGDYSESLQALAALRAPVDAFFDDVMVNAEDPALRANRLGLLAKLHAAMNQVADISKLS 711
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_RALSO (Glycyl-tRNA synthetase beta subunit OS=Ralstonia solanacearum GN=glyS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.181e-13 Identity = 46/105 (43.81%), Postives = 57/105 (54.29%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KRI N+LKK + IG+V L+TLA RE VD+FF +MVMA+D A+R NRLALLG+LH LMN+VADIS+LA Sbjct: 592 KRITNILKKTDITIGSVQPQLLREDAERALHQAVATSEPHVHDAFARGDFTTALKTLASLREAVDSFFDGVMVMADDTALRDNRLALLGELHGLMNRVADISKLA 696
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_LEPCP (Glycyl-tRNA synthetase beta subunit OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glyS PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13 Identity = 46/106 (43.40%), Postives = 59/106 (55.66%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGA-VNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KRIGN+LKKAEG + A ++ A+L+ LA + PVDAFF D+MV AEDPA+RANRL LL LH MN+VA+++RLA Sbjct: 607 KRIGNILKKAEGTVEARIDAALLAEPAEQQLAAALAQVQPGADALFAQGEYAASLQALAALKAPVDAFFDDVMVNAEDPALRANRLGLLATLHGAMNRVAELARLA 712
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_METFK (Glycyl-tRNA synthetase beta subunit OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glyS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13 Identity = 44/106 (41.51%), Postives = 56/106 (52.83%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEI-GAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KR+GN+LKK++ I A+N +L+ LA + PVDAFF +MV AEDPA++ NRLALL LH MNQVAD+SRLA Sbjct: 602 KRVGNILKKSDSAIEAAINPALLQEDAEKTLAQALAQVQPQAQQAFAAGDYTGSLKALAALKAPVDAFFDHVMVNAEDPALKTNRLALLATLHQAMNQVADLSRLA 707
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_RALPJ (Glycyl-tRNA synthetase beta subunit OS=Ralstonia pickettii (strain 12J) GN=glyS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13 Identity = 46/105 (43.81%), Postives = 55/105 (52.38%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGAVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KRI N+LKK + IGAV L+TLA RE VD FF +MVMA+D A+R NRLALL +LH LMN+VADIS+LA Sbjct: 592 KRITNILKKTDVAIGAVQPPLLKEDAERALHQSVVSAEPQVHDAFARGDFTTALKTLAGLREAVDTFFDGVMVMADDTALRDNRLALLAELHGLMNRVADISKLA 696
BLAST of EY729419 vs. ExPASy Swiss-Prot
Match: SYGB_DELAS (Glycyl-tRNA synthetase beta subunit OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=glyS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13 Identity = 46/106 (43.40%), Postives = 58/106 (54.72%), Query Frame = -3 Query: 248 KRIGNLLKKAEGEIGA-VNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANLRTLAQAREPVDAFFADIMVMAEDPAVRANRLALLGQLHTLMNQVADISRLA 562 KR+GN+LKKA+ + A V+ A+L+TLA R PVDAFF +MV AEDPA++ANRL LL LH MN+VAD+SRLA Sbjct: 598 KRVGNILKKADQAVQAQVDAAVLAEVAEKDLYAALQSVAPKAQQQFAAGDYTASLQTLAALRAPVDAFFEHVMVNAEDPALKANRLGLLATLHEAMNRVADLSRLA 703 The following BLAST results are available for this feature:
BLAST of EY729419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY729419 ID=EY729419; Name=EY729419; organism=Citrus sinensis; type=EST; length=564bpback to top |